RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	RPN14	P53196	417 aa		5.17	□□□□□ -1.58
LCB2	YDR062W	ATG4	P53867	494 aa		5.17	□□□□□ -1.58
LCB2	YDR062W	AAT1	Q01802	451 aa		5.17	□□□□□ -1.58
LCB2	YDR062W	DCS1	Q06151	350 aa		5.17	□□□□□ -1.58
LCB2	YDR062W	YOL159C	Q08300	171 aa		5.17	□□□□□ -1.58
LCB2	YDR062W	NUP188	P52593	1655 aa	Known RBP	5.17	□□□□□ -1.58
LCB2	YDR062W	IML1	P47170	1584 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	PUT4	P15380	627 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	ELO2	P25358	347 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	MIC60	P36112	540 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	MMS4	P38257	691 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	VHS2	P40463	436 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	EFM3	P47163	339 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	RRN5	Q02983	363 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	ABZ2	Q03266	374 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	MRPL1	Q04599	285 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	VAM3	Q12241	283 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	MTR10	Q99189	972 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	SRB8	P25648	1427 aa		5.16	□□□□□ -1.58
LCB2	YDR062W	YLR358C	O13565	187 aa		5.15	□□□□□ -1.58
LCB2	YDR062W	STE11	P23561	717 aa		5.15	□□□□□ -1.58
LCB2	YDR062W	RAD14	P28519	371 aa		5.15	□□□□□ -1.58
LCB2	YDR062W	NDI1	P32340	513 aa		5.15	□□□□□ -1.58
LCB2	YDR062W	TSC10	P38342	320 aa		5.15	□□□□□ -1.58
LCB2	YDR062W	CIN4	P39110	191 aa		5.15	□□□□□ -1.58
LCB2	YDR062W	RMD9	P53140	646 aa	Known RBP	5.15	□□□□□ -1.58
LCB2	YDR062W	COP1	P53622	1201 aa	Known RBP	5.15	□□□□□ -1.58
LCB2	YDR062W	YDR179W-A	Q03983	463 aa		5.15	□□□□□ -1.58
LCB2	YDR062W	PDE2	P06776	526 aa		5.15	□□□□□ -1.59
LCB2	YDR062W	WHI2	P12611	486 aa		5.15	□□□□□ -1.59
LCB2	YDR062W	ERG4	P25340	473 aa		5.15	□□□□□ -1.59
LCB2	YDR062W	MCM4	P30665	933 aa	Known RBP	5.15	□□□□□ -1.59
LCB2	YDR062W	HIR2	P32480	875 aa		5.15	□□□□□ -1.59
LCB2	YDR062W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
LCB2	YDR062W	RPL32	P38061	130 aa	Known RBP	5.15	□□□□□ -1.59
LCB2	YDR062W	RIX1	P38883	763 aa	Predicted RBP	5.15	□□□□□ -1.59
LCB2	YDR062W	OPT1	P40897	799 aa		5.15	□□□□□ -1.59
LCB2	YDR062W	GCD10	P41814	478 aa		5.15	□□□□□ -1.59
LCB2	YDR062W	RPA34	P47006	233 aa	Predicted RBP	5.15	□□□□□ -1.59
LCB2	YDR062W	COQ6	P53318	479 aa		5.15	□□□□□ -1.59
LCB2	YDR062W	EGD1	Q02642	157 aa	Known RBP	5.15	□□□□□ -1.59
LCB2	YDR062W	YPL062W	Q02781	134 aa		5.15	□□□□□ -1.59
LCB2	YDR062W	MSC1	Q03104	513 aa		5.15	□□□□□ -1.59
LCB2	YDR062W	MSC3	Q05812	728 aa		5.15	□□□□□ -1.59
LCB2	YDR062W	MRH1	Q12117	320 aa	Predicted RBP	5.15	□□□□□ -1.59
LCB2	YDR062W	VMR1	P38735	1592 aa		5.14	□□□□□ -1.59
LCB2	YDR062W	CAR1	P00812	333 aa	Known RBP	5.14	□□□□□ -1.59
LCB2	YDR062W	GAL7	P08431	366 aa		5.14	□□□□□ -1.59
LCB2	YDR062W	GAC1	P28006	793 aa		5.14	□□□□□ -1.59
LCB2	YDR062W	YHL017W	P38745	532 aa		5.14	□□□□□ -1.59
LCB2	YDR062W	SPT8	P38915	602 aa		5.14	□□□□□ -1.59
LCB2	YDR062W	AIM22	P47051	409 aa		5.14	□□□□□ -1.59
LCB2	YDR062W	YGL108C	P53139	140 aa		5.14	□□□□□ -1.59
LCB2	YDR062W	ERG26	P53199	349 aa	Known RBP	5.14	□□□□□ -1.59
LCB2	YDR062W	GFD1	Q04839	188 aa	Known RBP	5.14	□□□□□ -1.59
LCB2	YDR062W	DIS3	Q08162	1001 aa	Known RBP	5.14	□□□□□ -1.59
LCB2	YDR062W	PCL8	Q08966	492 aa		5.14	□□□□□ -1.59
LCB2	YDR062W	YIL002W-A	Q3E7Z5	69 aa		5.14	□□□□□ -1.59
LCB2	YDR062W	CBP2	P03874	630 aa	Predicted RBP	5.13	□□□□□ -1.59
LCB2	YDR062W	CBP1	P07252	654 aa		5.13	□□□□□ -1.59
LCB2	YDR062W	HOM2	P13663	365 aa	Known RBP	5.13	□□□□□ -1.59
LCB2	YDR062W	MRPL9	P31334	269 aa		5.13	□□□□□ -1.59
LCB2	YDR062W	PXL1	P36166	706 aa		5.13	□□□□□ -1.59
LCB2	YDR062W	DBP8	P38719	431 aa		5.13	□□□□□ -1.59
LCB2	YDR062W	SMC2	P38989	1170 aa	Known RBP	5.13	□□□□□ -1.59
LCB2	YDR062W	AGX1	P43567	385 aa		5.13	□□□□□ -1.59
LCB2	YDR062W	ATG27	P46989	271 aa		5.13	□□□□□ -1.59
LCB2	YDR062W	RRP46	P53256	223 aa	Predicted RBP	5.13	□□□□□ -1.59
LCB2	YDR062W	PRM1	P53835	661 aa		5.13	□□□□□ -1.59
LCB2	YDR062W	OCA2	P53949	197 aa		5.13	□□□□□ -1.59
LCB2	YDR062W	RRB1	Q04225	511 aa	Known RBP	5.13	□□□□□ -1.59
LCB2	YDR062W	VPS20	Q04272	221 aa		5.13	□□□□□ -1.59
LCB2	YDR062W	HRD3	Q05787	833 aa		5.13	□□□□□ -1.59
LCB2	YDR062W	LEA1	Q08963	238 aa	Predicted RBP	5.13	□□□□□ -1.59
LCB2	YDR062W	ZPS1	Q12512	249 aa		5.13	□□□□□ -1.59
LCB2	YDR062W	ILV5	P06168	395 aa	Known RBP	5.12	□□□□□ -1.59
LCB2	YDR062W	GPH1	P06738	902 aa	Known RBP	5.12	□□□□□ -1.59
LCB2	YDR062W	GCD2	P12754	651 aa	Predicted RBP	5.12	□□□□□ -1.59
LCB2	YDR062W	KRS1	P15180	591 aa	Known RBP	5.12	□□□□□ -1.59
LCB2	YDR062W	PRP2	P20095	876 aa	Predicted RBP	5.12	□□□□□ -1.59
LCB2	YDR062W	PTC6	P25646	442 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	ARG2	P40360	574 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	NUP84	P52891	726 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	UTP6	Q02354	440 aa	Known RBP	5.12	□□□□□ -1.59
LCB2	YDR062W	RNT1	Q02555	471 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	WAR1	Q03631	944 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	EMI2	Q04409	500 aa	Known RBP	5.12	□□□□□ -1.59
LCB2	YDR062W	ARO10	Q06408	635 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	NDL1	Q06568	189 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	ECM30	Q06673	1274 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	CYK3	Q07533	885 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	GSH2	Q08220	491 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	AHA1	Q12449	350 aa	Known RBP	5.12	□□□□□ -1.59
LCB2	YDR062W	STE3	P06783	470 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	ALG7	P07286	448 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	PRP6	P19735	899 aa	Predicted RBP	5.12	□□□□□ -1.59
LCB2	YDR062W	GMH1	P36125	273 aa		5.12	□□□□□ -1.59
LCB2	YDR062W	ASC1	P38011	319 aa	Known RBP	5.12	□□□□□ -1.59
LCB2	YDR062W	MNN10	P50108	393 aa	Known RBP	5.12	□□□□□ -1.59
LCB2	YDR062W	YMR178W	Q03219	274 aa	Known RBP	5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms