RNA–Protein interactions for RNA: YDR030C

RAD28, Transcript of Protein involved in DNA repair, yeast

Gene RAD28, Length 1,521 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD28	YDR030C	GCN5	Q03330	439 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	TAF12	Q03761	539 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	YDR132C	Q03900	495 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	BLS1	Q06071	122 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	REH1	Q06709	432 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	YDL121C	Q07541	149 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	PSR1	Q07800	427 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	UBR2	Q07963	1872 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	SGT1	Q08446	395 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	TRE2	Q08693	809 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	GET4	Q12125	312 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	RMD5	Q12508	421 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	SAS5	Q99314	248 aa		4.55	□□□□□ -1.68
RAD28	YDR030C	MSS18	P08593	268 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	SUI3	P09064	285 aa	Known RBP	4.54	□□□□□ -1.68
RAD28	YDR030C	AMD1	P15274	810 aa	Known RBP	4.54	□□□□□ -1.68
RAD28	YDR030C	TYR1	P20049	452 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	AAT2	P23542	418 aa	Known RBP	4.54	□□□□□ -1.68
RAD28	YDR030C	YCR099C	P25657	155 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	BUB2	P26448	306 aa	Predicted RBP	4.54	□□□□□ -1.68
RAD28	YDR030C	PHO91	P27514	894 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	NGG1	P32494	702 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	KAR9	P32526	644 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	IMP3	P32899	183 aa	Predicted RBP	4.54	□□□□□ -1.68
RAD28	YDR030C	SKT5	P34226	696 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	CTF13	P35203	478 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	IST2	P38250	946 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	TDP1	P38319	544 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	SRP72	P38688	640 aa	Known RBP	4.54	□□□□□ -1.68
RAD28	YDR030C	CYC2	P38909	366 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	UBP7	P40453	1071 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	OPT1	P40897	799 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	CAF16	P43569	289 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	BST1	P43571	1029 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	BUD13	P46947	266 aa	Predicted RBP	4.54	□□□□□ -1.68
RAD28	YDR030C	PMT3	P47190	753 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	PRP24	P49960	444 aa	Known RBP	4.54	□□□□□ -1.68
RAD28	YDR030C	SAP4	P53036	818 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	VPS62	P53285	467 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	GPI1	P53306	609 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	IBD2	P53892	351 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	PIR3	Q03180	325 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	GAS3	Q03655	524 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	HEL2	Q05580	639 aa	Known RBP	4.54	□□□□□ -1.68
RAD28	YDR030C	GMC2	Q06201	188 aa		4.54	□□□□□ -1.68
RAD28	YDR030C	MAS1	P10507	462 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	SEC63	P14906	663 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	CCA1	P21269	546 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	RVS161	P25343	265 aa	Known RBP	4.53	□□□□□ -1.68
RAD28	YDR030C	DCC1	P25559	380 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	MF(ALPHA)2	P32435	120 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	UGP1	P32861	499 aa	Known RBP	4.53	□□□□□ -1.68
RAD28	YDR030C	YKR051W	P36142	418 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	STB5	P38699	743 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	NUP60	P39705	539 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	ECM10	P39987	644 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	IMA5	P40884	581 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	UFE1	P41834	346 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	YRB1	P41920	201 aa	Known RBP	4.53	□□□□□ -1.68
RAD28	YDR030C	BNA3	P47039	444 aa	Known RBP	4.53	□□□□□ -1.68
RAD28	YDR030C	RAI1	P53063	387 aa	Known RBP	4.53	□□□□□ -1.68
RAD28	YDR030C	TMA20	P89886	181 aa	Predicted RBP	4.53	□□□□□ -1.68
RAD28	YDR030C	YML131W	Q03102	365 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	GOT1	Q03554	138 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	HER2	Q03557	464 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	PLB2	Q03674	706 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	ROT1	Q03691	256 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	YMR226C	Q05016	267 aa	Known RBP	4.53	□□□□□ -1.68
RAD28	YDR030C	ECM30	Q06673	1274 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	YLR413W	Q06689	675 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	YLR012C	Q07927	99 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
RAD28	YDR030C	ULA1	Q12059	462 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	YLR049C	Q12110	428 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	MRH1	Q12117	320 aa	Predicted RBP	4.53	□□□□□ -1.68
RAD28	YDR030C	HUA2	Q12134	243 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	YOR342C	Q12182	319 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	PSY3	Q12318	242 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	AHA1	Q12449	350 aa	Known RBP	4.53	□□□□□ -1.68
RAD28	YDR030C	YLR149C	Q99296	730 aa		4.53	□□□□□ -1.68
RAD28	YDR030C	BCY1	P07278	416 aa	Known RBP	4.52	□□□□□ -1.69
RAD28	YDR030C	HSF1	P10961	833 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	SNF4	P12904	322 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	PHO81	P17442	1178 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	PHO3	P24031	467 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	ERG6	P25087	383 aa	Known RBP	4.52	□□□□□ -1.69
RAD28	YDR030C	RBK1	P25332	333 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	PGS1	P25578	521 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	SPB1	P25582	841 aa	Predicted RBP	4.52	□□□□□ -1.69
RAD28	YDR030C	PCL2	P25693	308 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	TOD6	P34219	525 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	GCS1	P35197	352 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	FRE2	P36033	711 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	ECM4	P36156	370 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	KTR4	P38131	464 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	EFM1	P38732	585 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	FAA2	P39518	744 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	ZRG8	P40021	1076 aa		4.52	□□□□□ -1.69
RAD28	YDR030C	ARB1	P40024	610 aa	Known RBP	4.52	□□□□□ -1.69
RAD28	YDR030C	ALG8	P40351	577 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms