RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C MAK10Q02197 733 aa2.82□□□□□ -1.96
SOK1YDR006C FMP30Q02883 468 aa2.82□□□□□ -1.96
SOK1YDR006C RLI1Q03195 608 aaKnown RBP2.82□□□□□ -1.96
SOK1YDR006C YLR283WQ05867 314 aa2.82□□□□□ -1.96
SOK1YDR006C SSQ1Q05931 657 aaPredicted RBP2.82□□□□□ -1.96
SOK1YDR006C RIM20Q12033 661 aa2.82□□□□□ -1.96
SOK1YDR006C YPR022CQ12139 1133 aa2.82□□□□□ -1.96
SOK1YDR006C RUP1Q12242 671 aa2.82□□□□□ -1.96
SOK1YDR006C TDH3P00359 332 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SOK1YDR006C ATP2P00830 511 aaKnown RBP2.82□□□□□ -1.96
SOK1YDR006C GAL80P04387 435 aa2.82□□□□□ -1.96
SOK1YDR006C GCD2P12754 651 aaPredicted RBP2.82□□□□□ -1.96
SOK1YDR006C FUS3P16892 353 aaKnown RBP2.82□□□□□ -1.96
SOK1YDR006C SPO7P18410 259 aa2.82□□□□□ -1.96
SOK1YDR006C YCP4P25349 247 aaKnown RBP2.82□□□□□ -1.96
SOK1YDR006C EHD3P28817 500 aa2.82□□□□□ -1.96
SOK1YDR006C TPS2P31688 896 aaKnown RBP2.82□□□□□ -1.96
SOK1YDR006C COT1P32798 439 aa2.82□□□□□ -1.96
SOK1YDR006C TMN3P40071 706 aa2.82□□□□□ -1.96
SOK1YDR006C DOT5P40553 215 aa2.82□□□□□ -1.96
SOK1YDR006C DSN1P40568 576 aa2.82□□□□□ -1.96
SOK1YDR006C EMC2P47133 292 aaKnown RBP2.82□□□□□ -1.96
SOK1YDR006C TWF1P53250 332 aa2.82□□□□□ -1.96
SOK1YDR006C FHN1P53279 174 aa2.82□□□□□ -1.96
SOK1YDR006C NOP13P53883 403 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SOK1YDR006C NUP116Q02630 1113 aa2.82□□□□□ -1.96
SOK1YDR006C SHR3Q02774 210 aa2.82□□□□□ -1.96
SOK1YDR006C YDC1Q02896 317 aa2.82□□□□□ -1.96
SOK1YDR006C GCN5Q03330 439 aa2.82□□□□□ -1.96
SOK1YDR006C YMR111CQ04461 462 aaPredicted RBP2.82□□□□□ -1.96
SOK1YDR006C GIM5Q04493 163 aa2.82□□□□□ -1.96
SOK1YDR006C YDR109CQ04585 715 aa2.82□□□□□ -1.96
SOK1YDR006C MRPL1Q04599 285 aa2.82□□□□□ -1.96
SOK1YDR006C VPS38Q05919 439 aa2.82□□□□□ -1.96
SOK1YDR006C SSA3P09435 649 aaKnown RBP2.81□□□□□ -1.96
SOK1YDR006C MATALPHA1P0CY06 175 aa2.81□□□□□ -1.96
SOK1YDR006C HMLALPHA1P0CY07 175 aa2.81□□□□□ -1.96
SOK1YDR006C RPS7AP26786 190 aaKnown RBP2.81□□□□□ -1.96
SOK1YDR006C GLG1P36143 616 aa2.81□□□□□ -1.96
SOK1YDR006C YPK3P38070 525 aa2.81□□□□□ -1.96
SOK1YDR006C ARO9P38840 513 aaPredicted RBP2.81□□□□□ -1.96
SOK1YDR006C YHR210CP38893 341 aa2.81□□□□□ -1.96
SOK1YDR006C YIL089WP40500 205 aa2.81□□□□□ -1.96
SOK1YDR006C OPT1P40897 799 aa2.81□□□□□ -1.96
SOK1YDR006C BNA6P43619 295 aa2.81□□□□□ -1.96
SOK1YDR006C STB2P46679 850 aa2.81□□□□□ -1.96
SOK1YDR006C GLG2P47011 380 aa2.81□□□□□ -1.96
SOK1YDR006C IMD4P50094 524 aaKnown RBP2.81□□□□□ -1.96
SOK1YDR006C INP52P50942 1183 aa2.81□□□□□ -1.96
SOK1YDR006C TRM112P53738 135 aaPredicted RBP2.81□□□□□ -1.96
SOK1YDR006C MRPL22P53881 309 aa2.81□□□□□ -1.96
SOK1YDR006C ESBP6P53918 673 aa2.81□□□□□ -1.96
SOK1YDR006C RPN9Q04062 393 aaKnown RBP2.81□□□□□ -1.96
SOK1YDR006C NAT4Q04751 285 aa2.81□□□□□ -1.96
SOK1YDR006C YLR224WQ05947 369 aa2.81□□□□□ -1.96
SOK1YDR006C MCM21Q06675 368 aa2.81□□□□□ -1.96
SOK1YDR006C CRT10Q08226 957 aa2.81□□□□□ -1.96
SOK1YDR006C YPL277CQ08989 487 aa2.81□□□□□ -1.96
SOK1YDR006C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SOK1YDR006C INP53Q12271 1107 aa2.81□□□□□ -1.96
SOK1YDR006C SEC7P11075 2009 aaKnown RBP2.81□□□□□ -1.96
SOK1YDR006C PET122P10355 254 aa2.81□□□□□ -1.96
SOK1YDR006C RSR1P13856 272 aa2.81□□□□□ -1.96
SOK1YDR006C LRE1P25579 583 aaKnown RBP2.81□□□□□ -1.96
SOK1YDR006C YCR015CP25616 317 aa2.81□□□□□ -1.96
SOK1YDR006C YUR1P26725 428 aa2.81□□□□□ -1.96
SOK1YDR006C CDC15P27636 974 aa2.81□□□□□ -1.96
SOK1YDR006C PDB1P32473 366 aaKnown RBP2.81□□□□□ -1.96
SOK1YDR006C SPO23P33757 523 aa2.81□□□□□ -1.96
SOK1YDR006C BMH2P34730 273 aaKnown RBP2.81□□□□□ -1.96
SOK1YDR006C MRPL37P36532 105 aa2.81□□□□□ -1.96
SOK1YDR006C YHB1P39676 399 aaKnown RBP2.81□□□□□ -1.96
SOK1YDR006C AFG3P39925 761 aa2.81□□□□□ -1.96
SOK1YDR006C CAB2P40506 365 aa2.81□□□□□ -1.96
SOK1YDR006C YGR117CP53270 476 aa2.81□□□□□ -1.96
SOK1YDR006C SLI1P53304 468 aa2.81□□□□□ -1.96
SOK1YDR006C CDA2Q06703 312 aa2.81□□□□□ -1.96
SOK1YDR006C DCI1Q08558 271 aa2.81□□□□□ -1.96
SOK1YDR006C RPS10AQ08745 105 aaPredicted RBP2.81□□□□□ -1.96
SOK1YDR006C SRO7Q12038 1033 aa2.81□□□□□ -1.96
SOK1YDR006C HUA2Q12134 243 aa2.81□□□□□ -1.96
SOK1YDR006C BRR1Q99177 341 aaPredicted RBP2.81□□□□□ -1.96
SOK1YDR006C PTP1P25044 335 aa2.8□□□□□ -1.96
SOK1YDR006C SRB5P32585 307 aa2.8□□□□□ -1.96
SOK1YDR006C TOA2P32774 122 aa2.8□□□□□ -1.96
SOK1YDR006C BCS1P32839 456 aa2.8□□□□□ -1.96
SOK1YDR006C OCT1P35999 772 aa2.8□□□□□ -1.96
SOK1YDR006C CHK1P38147 527 aa2.8□□□□□ -1.96
SOK1YDR006C FAD1P38913 306 aa2.8□□□□□ -1.96
SOK1YDR006C PET100P38958 111 aa2.8□□□□□ -1.96
SOK1YDR006C YER121WP40076 114 aa2.8□□□□□ -1.96
SOK1YDR006C PFK26P40433 827 aaKnown RBP2.8□□□□□ -1.96
SOK1YDR006C YIR042CP40586 236 aa2.8□□□□□ -1.96
SOK1YDR006C AIM22P47051 409 aa2.8□□□□□ -1.96
SOK1YDR006C DIA1P54005 336 aa2.8□□□□□ -1.96
SOK1YDR006C IRC4Q03036 179 aa2.8□□□□□ -1.96
SOK1YDR006C CMS1Q07897 291 aaKnown RBP2.8□□□□□ -1.96
SOK1YDR006C YLR040CQ07988 224 aa2.8□□□□□ -1.96
SOK1YDR006C MLH3Q12083 715 aa2.8□□□□□ -1.96
SOK1YDR006C BAG7Q12128 409 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms