RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C AVT4P50944 713 aa2.55□□□□□ -2
ASM4YDL088C YML131WQ03102 365 aa2.55□□□□□ -2
ASM4YDL088C YMR018WQ04364 514 aa2.55□□□□□ -2
ASM4YDL088C HUA2Q12134 243 aa2.55□□□□□ -2
ASM4YDL088C YBR126W-AQ8TGU7 68 aa2.55□□□□□ -2
ASM4YDL088C MES1P00958 751 aaKnown RBP2.54□□□□□ -2
ASM4YDL088C ISY1P21374 235 aaPredicted RBP2.54□□□□□ -2
ASM4YDL088C CHS3P29465 1165 aa2.54□□□□□ -2
ASM4YDL088C WWM1P43582 211 aaKnown RBP2.54□□□□□ -2
ASM4YDL088C VID30P53076 958 aa2.54□□□□□ -2
ASM4YDL088C YLR152CP54072 576 aa2.54□□□□□ -2
ASM4YDL088C TSR1Q07381 788 aaKnown RBP2.54□□□□□ -2
ASM4YDL088C THP3Q12049 470 aaKnown RBP2.54□□□□□ -2
ASM4YDL088C NAT1P12945 854 aaKnown RBP2.53□□□□□ -2
ASM4YDL088C SDH3P33421 198 aa2.53□□□□□ -2
ASM4YDL088C MSR1P38714 643 aa2.53□□□□□ -2
ASM4YDL088C GOR1P53839 350 aa2.53□□□□□ -2
ASM4YDL088C YLR108CQ12259 485 aa2.53□□□□□ -2
ASM4YDL088C RKM5Q12367 367 aa2.53□□□□□ -2
ASM4YDL088C SOD1P00445 154 aaKnown RBP2.53□□□□□ -2.01
ASM4YDL088C RPL19AP0CX82 189 aaKnown RBP2.53□□□□□ -2.01
ASM4YDL088C RPL19BP0CX83 189 aaPredicted RBP2.53□□□□□ -2.01
ASM4YDL088C RVS161P25343 265 aaKnown RBP2.53□□□□□ -2.01
ASM4YDL088C CRM1P30822 1084 aaKnown RBP2.53□□□□□ -2.01
ASM4YDL088C PRS1P32895 427 aaKnown RBP2.53□□□□□ -2.01
ASM4YDL088C POP6P53218 158 aa2.53□□□□□ -2.01
ASM4YDL088C TOF1P53840 1238 aa2.53□□□□□ -2.01
ASM4YDL088C HEF3P53978 1044 aaKnown RBP2.53□□□□□ -2.01
ASM4YDL088C MRPL35Q06678 367 aa2.53□□□□□ -2.01
ASM4YDL088C SSP2Q08646 371 aa2.53□□□□□ -2.01
ASM4YDL088C BRR1Q99177 341 aaPredicted RBP2.53□□□□□ -2.01
ASM4YDL088C ADH2P00331 348 aaKnown RBP2.52□□□□□ -2.01
ASM4YDL088C BUB3P26449 341 aa2.52□□□□□ -2.01
ASM4YDL088C GLC7P32598 312 aaKnown RBP2.52□□□□□ -2.01
ASM4YDL088C SPR1P32603 445 aa2.52□□□□□ -2.01
ASM4YDL088C MFT1P33441 392 aaKnown RBP2.52□□□□□ -2.01
ASM4YDL088C POP1P41812 875 aa2.52□□□□□ -2.01
ASM4YDL088C IMD4P50094 524 aaKnown RBP2.52□□□□□ -2.01
ASM4YDL088C APJ1P53940 528 aa2.52□□□□□ -2.01
ASM4YDL088C YPL199CQ08954 240 aa2.52□□□□□ -2.01
ASM4YDL088C RBD2Q12270 262 aa2.52□□□□□ -2.01
ASM4YDL088C NOP58Q12499 511 aaKnown RBP2.52□□□□□ -2.01
ASM4YDL088C PIM1P36775 1133 aa2.51□□□□□ -2.01
ASM4YDL088C REE1P40893 198 aa2.51□□□□□ -2.01
ASM4YDL088C GCD10P41814 478 aa2.51□□□□□ -2.01
ASM4YDL088C AIM22P47051 409 aa2.51□□□□□ -2.01
ASM4YDL088C IBD2P53892 351 aa2.51□□□□□ -2.01
ASM4YDL088C KEL3Q08979 651 aaPredicted RBP2.51□□□□□ -2.01
ASM4YDL088C COR1P07256 457 aa2.5□□□□□ -2.01
ASM4YDL088C HSC82P15108 705 aaKnown RBP2.5□□□□□ -2.01
ASM4YDL088C PET123P17558 318 aa2.5□□□□□ -2.01
ASM4YDL088C VPS24P36095 224 aaKnown RBP2.5□□□□□ -2.01
ASM4YDL088C ISC1P40015 477 aaKnown RBP2.5□□□□□ -2.01
ASM4YDL088C DUO1P53168 247 aaKnown RBP2.5□□□□□ -2.01
ASM4YDL088C OGG1P53397 376 aaPredicted RBP2.5□□□□□ -2.01
ASM4YDL088C YEH1Q07804 573 aa2.5□□□□□ -2.01
ASM4YDL088C YAR066WP0CX18 203 aa2.49□□□□□ -2.01
ASM4YDL088C YHR214WP0CX19 203 aa2.49□□□□□ -2.01
ASM4YDL088C PRP2P20095 876 aaPredicted RBP2.49□□□□□ -2.01
ASM4YDL088C ELO2P25358 347 aa2.49□□□□□ -2.01
ASM4YDL088C YCR100CP25606 316 aa2.49□□□□□ -2.01
ASM4YDL088C PWP2P25635 923 aaKnown RBP2.49□□□□□ -2.01
ASM4YDL088C RRT5P43607 289 aa2.49□□□□□ -2.01
ASM4YDL088C ART5P53244 586 aaKnown RBP2.49□□□□□ -2.01
ASM4YDL088C SHY1P53266 389 aa2.49□□□□□ -2.01
ASM4YDL088C NGL3Q03210 505 aa2.49□□□□□ -2.01
ASM4YDL088C YMR027WQ04371 470 aa2.49□□□□□ -2.01
ASM4YDL088C HRI1Q05905 244 aaKnown RBP2.49□□□□□ -2.01
ASM4YDL088C YPT6Q99260 215 aa2.49□□□□□ -2.01
ASM4YDL088C RAV1P47104 1357 aa2.49□□□□□ -2.01
ASM4YDL088C CDC60P26637 1090 aaKnown RBP2.49□□□□□ -2.01
ASM4YDL088C TCD2P36101 447 aaKnown RBP2.49□□□□□ -2.01
ASM4YDL088C CBP4P37267 147 aa2.49□□□□□ -2.01
ASM4YDL088C CCT6P39079 546 aa2.49□□□□□ -2.01
ASM4YDL088C MBB1P39534 108 aa2.49□□□□□ -2.01
ASM4YDL088C ERP2P39704 215 aa2.49□□□□□ -2.01
ASM4YDL088C RLM1Q12224 676 aa2.49□□□□□ -2.01
ASM4YDL088C LEU4P06208 619 aaKnown RBP2.48□□□□□ -2.01
ASM4YDL088C CDC16P09798 840 aa2.48□□□□□ -2.01
ASM4YDL088C SAM1P10659 382 aaKnown RBP2.48□□□□□ -2.01
ASM4YDL088C SAM2P19358 384 aaKnown RBP2.48□□□□□ -2.01
ASM4YDL088C DAL2P25335 343 aa2.48□□□□□ -2.01
ASM4YDL088C SLX1P38324 304 aa2.48□□□□□ -2.01
ASM4YDL088C TMA108P40462 946 aa2.48□□□□□ -2.01
ASM4YDL088C OST1P41543 476 aaKnown RBP2.48□□□□□ -2.01
ASM4YDL088C NCA3P46955 337 aa2.48□□□□□ -2.01
ASM4YDL088C URB2P47108 1174 aa2.48□□□□□ -2.01
ASM4YDL088C ATP11P32453 318 aa2.47□□□□□ -2.01
ASM4YDL088C STB6P36085 766 aa2.47□□□□□ -2.01
ASM4YDL088C FUI1P38196 639 aa2.47□□□□□ -2.01
ASM4YDL088C PEX25Q02969 394 aa2.47□□□□□ -2.01
ASM4YDL088C ODC1Q03028 310 aa2.47□□□□□ -2.01
ASM4YDL088C MUM3Q08750 479 aa2.47□□□□□ -2.01
ASM4YDL088C WTM1Q12363 437 aaKnown RBP2.47□□□□□ -2.01
ASM4YDL088C SEC53P07283 254 aaKnown RBP2.46□□□□□ -2.02
ASM4YDL088C UTH1P36135 365 aa2.46□□□□□ -2.02
ASM4YDL088C REG2P38232 338 aa2.46□□□□□ -2.02
ASM4YDL088C FLC2P39719 783 aa2.46□□□□□ -2.02
ASM4YDL088C PRM5P40476 318 aa2.46□□□□□ -2.02
ASM4YDL088C SYG1P40528 902 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms