RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C RMD5Q12508 421 aa5.65□□□□□ -1.5
MDH3YDL078C ILS1P09436 1072 aaKnown RBP5.64□□□□□ -1.51
MDH3YDL078C HEM15P16622 393 aa5.64□□□□□ -1.51
MDH3YDL078C THR1P17423 357 aaKnown RBP5.64□□□□□ -1.51
MDH3YDL078C RPA135P22138 1203 aaKnown RBP5.64□□□□□ -1.51
MDH3YDL078C CNA1P23287 553 aa5.64□□□□□ -1.51
MDH3YDL078C OCA4P25366 362 aa5.64□□□□□ -1.51
MDH3YDL078C SPB1P25582 841 aaPredicted RBP5.64□□□□□ -1.51
MDH3YDL078C KAR4P25583 335 aa5.64□□□□□ -1.51
MDH3YDL078C YCR099CP25657 155 aa5.64□□□□□ -1.51
MDH3YDL078C MF(ALPHA)2P32435 120 aa5.64□□□□□ -1.51
MDH3YDL078C NIP1P32497 812 aaKnown RBP5.64□□□□□ -1.51
MDH3YDL078C MIA40P36046 403 aa5.64□□□□□ -1.51
MDH3YDL078C LAS1P36146 502 aaPredicted RBP5.64□□□□□ -1.51
MDH3YDL078C MNN2P38069 597 aa5.64□□□□□ -1.51
MDH3YDL078C VMA22P38784 181 aa5.64□□□□□ -1.51
MDH3YDL078C MEF2P39677 819 aa5.64□□□□□ -1.51
MDH3YDL078C YAL037WP39728 267 aa5.64□□□□□ -1.51
MDH3YDL078C YER034WP40022 185 aaKnown RBP5.64□□□□□ -1.51
MDH3YDL078C DUG1P43616 481 aaKnown RBP5.64□□□□□ -1.51
MDH3YDL078C PET130P47065 347 aa5.64□□□□□ -1.51
MDH3YDL078C ZRG17P53735 605 aa5.64□□□□□ -1.51
MDH3YDL078C SRL4Q03085 281 aa5.64□□□□□ -1.51
MDH3YDL078C VPS16Q03308 798 aa5.64□□□□□ -1.51
MDH3YDL078C DFG5Q05031 458 aa5.64□□□□□ -1.51
MDH3YDL078C CDC123Q05791 360 aa5.64□□□□□ -1.51
MDH3YDL078C GRS2Q06817 618 aa5.64□□□□□ -1.51
MDH3YDL078C SOG2Q08817 791 aa5.64□□□□□ -1.51
MDH3YDL078C HSP26P15992 214 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
MDH3YDL078C SPP381P38282 291 aaPredicted RBP5.63□□□□□ -1.51
MDH3YDL078C PEX18P38855 283 aa5.63□□□□□ -1.51
MDH3YDL078C UME6P39001 836 aa5.63□□□□□ -1.51
MDH3YDL078C SSN3P39073 555 aa5.63□□□□□ -1.51
MDH3YDL078C MNN1P39106 762 aa5.63□□□□□ -1.51
MDH3YDL078C YEL073CP39974 107 aa5.63□□□□□ -1.51
MDH3YDL078C SER3P40054 469 aa5.63□□□□□ -1.51
MDH3YDL078C LSM5P40089 93 aaKnown RBP5.63□□□□□ -1.51
MDH3YDL078C ZIM17P42844 174 aa5.63□□□□□ -1.51
MDH3YDL078C CWC25P53854 179 aaKnown RBP5.63□□□□□ -1.51
MDH3YDL078C ARP4P80428 489 aa5.63□□□□□ -1.51
MDH3YDL078C NAM8Q00539 523 aaKnown RBP5.63□□□□□ -1.51
MDH3YDL078C EGD1Q02642 157 aaKnown RBP5.63□□□□□ -1.51
MDH3YDL078C RVB1Q03940 463 aaKnown RBP5.63□□□□□ -1.51
MDH3YDL078C YDR444WQ04093 687 aa5.63□□□□□ -1.51
MDH3YDL078C DCS1Q06151 350 aa5.63□□□□□ -1.51
MDH3YDL078C SYT1Q06836 1226 aa5.63□□□□□ -1.51
MDH3YDL078C BRX1Q08235 291 aaKnown RBP5.63□□□□□ -1.51
MDH3YDL078C YLR125WQ12138 136 aa5.63□□□□□ -1.51
MDH3YDL078C WTM2Q12206 467 aa5.63□□□□□ -1.51
MDH3YDL078C MDM35O60200 86 aa5.62□□□□□ -1.51
MDH3YDL078C RPP2BP02400 110 aaKnown RBP5.62□□□□□ -1.51
MDH3YDL078C SPS1P08458 490 aa5.62□□□□□ -1.51
MDH3YDL078C ABF1P14164 731 aa5.62□□□□□ -1.51
MDH3YDL078C PRP4P20053 465 aaKnown RBP5.62□□□□□ -1.51
MDH3YDL078C VPS34P22543 875 aa5.62□□□□□ -1.51
MDH3YDL078C YSR3P23501 404 aa5.62□□□□□ -1.51
MDH3YDL078C PHO3P24031 467 aa5.62□□□□□ -1.51
MDH3YDL078C SFP1P32432 683 aa5.62□□□□□ -1.51
MDH3YDL078C RIM1P32445 135 aaKnown RBP5.62□□□□□ -1.51
MDH3YDL078C AFR1P33304 620 aa5.62□□□□□ -1.51
MDH3YDL078C TIP20P33891 701 aa5.62□□□□□ -1.51
MDH3YDL078C YPT52P36018 234 aaKnown RBP5.62□□□□□ -1.51
MDH3YDL078C RCN1P36054 211 aa5.62□□□□□ -1.51
MDH3YDL078C RPF2P36160 344 aaKnown RBP5.62□□□□□ -1.51
MDH3YDL078C MRPL37P36532 105 aa5.62□□□□□ -1.51
MDH3YDL078C YBR238CP38330 731 aaKnown RBP5.62□□□□□ -1.51
MDH3YDL078C LEU5P38702 357 aa5.62□□□□□ -1.51
MDH3YDL078C DED81P38707 554 aaKnown RBP5.62□□□□□ -1.51
MDH3YDL078C YHI9P38765 294 aa5.62□□□□□ -1.51
MDH3YDL078C MBP1P39678 833 aa5.62□□□□□ -1.51
MDH3YDL078C HAT2P39984 401 aa5.62□□□□□ -1.51
MDH3YDL078C GIM4P40005 111 aaKnown RBP5.62□□□□□ -1.51
MDH3YDL078C MEP1P40260 492 aa5.62□□□□□ -1.51
MDH3YDL078C ALA1P40825 983 aaKnown RBP5.62□□□□□ -1.51
MDH3YDL078C SSU1P41930 458 aa5.62□□□□□ -1.51
MDH3YDL078C YGR054WP53235 642 aaKnown RBP5.62□□□□□ -1.51
MDH3YDL078C NRM1P53718 249 aa5.62□□□□□ -1.51
MDH3YDL078C KTR5P53966 522 aaPredicted RBP5.62□□□□□ -1.51
MDH3YDL078C SLT2Q00772 484 aa5.62□□□□□ -1.51
MDH3YDL078C SPP2Q02521 185 aa5.62□□□□□ -1.51
MDH3YDL078C SHR3Q02774 210 aa5.62□□□□□ -1.51
MDH3YDL078C HED1Q03937 162 aa5.62□□□□□ -1.51
MDH3YDL078C RRP17Q04031 235 aaPredicted RBP5.62□□□□□ -1.51
MDH3YDL078C ATG38Q05789 226 aaKnown RBP5.62□□□□□ -1.51
MDH3YDL078C VHS3Q08438 674 aa5.62□□□□□ -1.51
MDH3YDL078C NUS1Q12063 375 aa5.62□□□□□ -1.51
MDH3YDL078C ERP4Q12450 207 aa5.62□□□□□ -1.51
MDH3YDL078C CSF1Q12150 2958 aa5.62□□□□□ -1.51
MDH3YDL078C STE2D6VTK4 431 aa5.61□□□□□ -1.51
MDH3YDL078C CUP1-1P0CX80 61 aa5.61□□□□□ -1.51
MDH3YDL078C CUP1-2P0CX81 61 aa5.61□□□□□ -1.51
MDH3YDL078C PWP1P21304 576 aaKnown RBP5.61□□□□□ -1.51
MDH3YDL078C CWP1P28319 239 aa5.61□□□□□ -1.51
MDH3YDL078C HRR25P29295 494 aaKnown RBP5.61□□□□□ -1.51
MDH3YDL078C YME1P32795 747 aa5.61□□□□□ -1.51
MDH3YDL078C BEM3P32873 1128 aa5.61□□□□□ -1.51
MDH3YDL078C VPS21P36017 210 aaKnown RBP5.61□□□□□ -1.51
MDH3YDL078C YHR045WP38775 560 aa5.61□□□□□ -1.51
MDH3YDL078C BFR1P38934 470 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
MDH3YDL078C CEM1P39525 442 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 173.6 ms