RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	CCT6	P39079	546 aa		1.39	□□□□□ -2.19
HMRA2	YCR096C	KAP123	P40069	1113 aa	Known RBP	1.39	□□□□□ -2.19
HMRA2	YCR096C	PAN6	P40459	309 aa		1.39	□□□□□ -2.19
HMRA2	YCR096C	AVT4	P50944	713 aa		1.39	□□□□□ -2.19
HMRA2	YCR096C	YGR126W	P53274	230 aa		1.39	□□□□□ -2.19
HMRA2	YCR096C	NGL3	Q03210	505 aa		1.39	□□□□□ -2.19
HMRA2	YCR096C	YKU80	Q04437	629 aa		1.39	□□□□□ -2.19
HMRA2	YCR096C	LUC7	Q07508	261 aa	Predicted RBP	1.39	□□□□□ -2.19
HMRA2	YCR096C	YOR365C	Q08844	703 aa		1.39	□□□□□ -2.19
HMRA2	YCR096C	TCO89	Q08921	799 aa		1.39	□□□□□ -2.19
HMRA2	YCR096C	RKM5	Q12367	367 aa		1.39	□□□□□ -2.19
HMRA2	YCR096C	SUC2	P00724	532 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	FUM1	P08417	488 aa	Known RBP	1.38	□□□□□ -2.19
HMRA2	YCR096C	CDC24	P11433	854 aa	Predicted RBP	1.38	□□□□□ -2.19
HMRA2	YCR096C	YCK1	P23291	538 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	YCR007C	P25354	239 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	BOS1	P25385	244 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	SSE2	P32590	693 aa	Known RBP	1.38	□□□□□ -2.19
HMRA2	YCR096C	YBR144C	P34215	104 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	SEF1	P34228	1148 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	MUD2	P36084	527 aa	Known RBP	1.38	□□□□□ -2.19
HMRA2	YCR096C	VPS24	P36095	224 aa	Known RBP	1.38	□□□□□ -2.19
HMRA2	YCR096C	AUR1	P36107	401 aa	Predicted RBP	1.38	□□□□□ -2.19
HMRA2	YCR096C	VID24	P38263	362 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	ICS2	P38284	255 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	1.38	□□□□□ -2.19	not detected
HMRA2	YCR096C	ARC1	P46672	376 aa	Known RBP	1.38	□□□□□ -2.19
HMRA2	YCR096C	AIM22	P47051	409 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	YJR154W	P47181	346 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	MEP3	P53390	489 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	BSC5	P53755	489 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	IPI3	P53877	555 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	YLR108C	Q12259	485 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	SKM1	Q12469	655 aa		1.38	□□□□□ -2.19
HMRA2	YCR096C	HSH49	Q99181	213 aa	Predicted RBP	1.38	□□□□□ -2.19
HMRA2	YCR096C	MF(ALPHA)1	P01149	165 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	PRB1	P09232	635 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	EST1	P17214	699 aa	Predicted RBP	1.37	□□□□□ -2.19
HMRA2	YCR096C	DAL2	P25335	343 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	YIH1	P25637	258 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	CHS3	P29465	1165 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	UTR4	P32626	227 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	MRPL10	P36520	322 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	YHR210C	P38893	341 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	AFG3	P39925	761 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	FAU1	P40099	211 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	DUO1	P53168	247 aa	Known RBP	1.37	□□□□□ -2.19
HMRA2	YCR096C	PEX25	Q02969	394 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	RSN1	Q03516	953 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	CFT2	Q12102	859 aa	Predicted RBP	1.37	□□□□□ -2.19
HMRA2	YCR096C	NBP2	Q12163	236 aa		1.37	□□□□□ -2.19
HMRA2	YCR096C	MES1	P00958	751 aa	Known RBP	1.36	□□□□□ -2.19
HMRA2	YCR096C	TRX2	P22803	104 aa	Known RBP	1.36	□□□□□ -2.19
HMRA2	YCR096C	FRE2	P36033	711 aa		1.36	□□□□□ -2.19
HMRA2	YCR096C	YHR131C	P38835	850 aa		1.36	□□□□□ -2.19
HMRA2	YCR096C	GCD10	P41814	478 aa		1.36	□□□□□ -2.19
HMRA2	YCR096C	FAR3	P46671	204 aa		1.36	□□□□□ -2.19
HMRA2	YCR096C	NCA3	P46955	337 aa		1.36	□□□□□ -2.19
HMRA2	YCR096C	IMD4	P50094	524 aa	Known RBP	1.36	□□□□□ -2.19
HMRA2	YCR096C	KTR5	P53966	522 aa	Predicted RBP	1.36	□□□□□ -2.19
HMRA2	YCR096C	BUD22	Q04347	519 aa	Known RBP	1.36	□□□□□ -2.19
HMRA2	YCR096C	CDC16	P09798	840 aa		1.35	□□□□□ -2.19
HMRA2	YCR096C	ART10	P18634	518 aa	Known RBP	1.35	□□□□□ -2.19
HMRA2	YCR096C	PWP2	P25635	923 aa	Known RBP	1.35	□□□□□ -2.19
HMRA2	YCR096C	NDI1	P32340	513 aa		1.35	□□□□□ -2.19
HMRA2	YCR096C	MCM10	P32354	571 aa		1.35	□□□□□ -2.19
HMRA2	YCR096C	TCM62	P38228	572 aa	Known RBP	1.35	□□□□□ -2.19
HMRA2	YCR096C	CIN4	P39110	191 aa		1.35	□□□□□ -2.19
HMRA2	YCR096C	ART5	P53244	586 aa	Known RBP	1.35	□□□□□ -2.19
HMRA2	YCR096C	YGR127W	P53275	312 aa		1.35	□□□□□ -2.19
HMRA2	YCR096C	GPI1	P53306	609 aa		1.35	□□□□□ -2.19
HMRA2	YCR096C	YPR091C	Q06833	770 aa		1.35	□□□□□ -2.19
HMRA2	YCR096C	THP1	Q08231	455 aa		1.35	□□□□□ -2.19
HMRA2	YCR096C	ETT1	Q08421	412 aa	Known RBP	1.35	□□□□□ -2.19
HMRA2	YCR096C	YBR126W-A	Q8TGU7	68 aa		1.35	□□□□□ -2.19
HMRA2	YCR096C	PRE8	P23639	250 aa		1.34	□□□□□ -2.19
HMRA2	YCR096C	ATP11	P32453	318 aa		1.34	□□□□□ -2.19
HMRA2	YCR096C	RSM22	P36056	628 aa		1.34	□□□□□ -2.19
HMRA2	YCR096C	DUG2	P38149	878 aa		1.34	□□□□□ -2.19
HMRA2	YCR096C	BNA4	P38169	460 aa		1.34	□□□□□ -2.19
HMRA2	YCR096C	CHS6	P40955	746 aa		1.34	□□□□□ -2.19
HMRA2	YCR096C	RRT5	P43607	289 aa		1.34	□□□□□ -2.19
HMRA2	YCR096C	ZPR1	P53303	486 aa	Known RBP	1.34	□□□□□ -2.19
HMRA2	YCR096C	RBS1	Q05672	457 aa	Known RBP	1.34	□□□□□ -2.19
HMRA2	YCR096C	FMP40	Q08968	688 aa	Predicted RBP	1.34	□□□□□ -2.19
HMRA2	YCR096C	KEL3	Q08979	651 aa	Predicted RBP	1.34	□□□□□ -2.19
HMRA2	YCR096C	RLM1	Q12224	676 aa		1.34	□□□□□ -2.19
HMRA2	YCR096C	PRM7	Q12459	698 aa		1.34	□□□□□ -2.19
HMRA2	YCR096C	YPT6	Q99260	215 aa		1.34	□□□□□ -2.19
HMRA2	YCR096C	COR1	P07256	457 aa		1.33	□□□□□ -2.2
HMRA2	YCR096C	RPS8A	P0CX39	200 aa	Known RBP	1.33	□□□□□ -2.2
HMRA2	YCR096C	RPS8B	P0CX40	200 aa	Known RBP	1.33	□□□□□ -2.2
HMRA2	YCR096C	GLK1	P17709	500 aa	Known RBP	1.33	□□□□□ -2.2
HMRA2	YCR096C	AAC3	P18238	307 aa		1.33	□□□□□ -2.2
HMRA2	YCR096C	SUI2	P20459	304 aa	Known RBP	1.33	□□□□□ -2.2
HMRA2	YCR096C	GLC7	P32598	312 aa	Known RBP	1.33	□□□□□ -2.2
HMRA2	YCR096C	SHP1	P34223	423 aa		1.33	□□□□□ -2.2
HMRA2	YCR096C	TCD2	P36101	447 aa	Known RBP	1.33	□□□□□ -2.2
HMRA2	YCR096C	YBL029W	P38201	376 aa		1.33	□□□□□ -2.2
HMRA2	YCR096C	YMR147W	P40218	223 aa	Known RBP	1.33	□□□□□ -2.2

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms