RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A YDL057WQ07379 328 aa3.3□□□□□ -1.88
RIM1YCR028C-A YEH1Q07804 573 aa3.3□□□□□ -1.88
RIM1YCR028C-A SDH5Q08230 162 aa3.3□□□□□ -1.88
RIM1YCR028C-A SEM1O94742 89 aa3.29□□□□□ -1.88
RIM1YCR028C-A PHO2P07269 559 aa3.29□□□□□ -1.88
RIM1YCR028C-A RPS19AP07280 144 aaKnown RBP3.29□□□□□ -1.88
RIM1YCR028C-A RPS19BP07281 144 aaPredicted RBP3.29□□□□□ -1.88
RIM1YCR028C-A RPS24AP0CX31 135 aaKnown RBP3.29□□□□□ -1.88
RIM1YCR028C-A RPS24BP0CX32 135 aaKnown RBP3.29□□□□□ -1.88
RIM1YCR028C-A ART10P18634 518 aaKnown RBP3.29□□□□□ -1.88
RIM1YCR028C-A TYR1P20049 452 aa3.29□□□□□ -1.88
RIM1YCR028C-A PEP3P27801 918 aa3.29□□□□□ -1.88
RIM1YCR028C-A TIF3P34167 436 aaKnown RBP3.29□□□□□ -1.88
RIM1YCR028C-A FLC2P39719 783 aa3.29□□□□□ -1.88
RIM1YCR028C-A IKS1P47042 667 aa3.29□□□□□ -1.88
RIM1YCR028C-A UPF3P48412 387 aaKnown RBP3.29□□□□□ -1.88
RIM1YCR028C-A APT1P49435 187 aaKnown RBP3.29□□□□□ -1.88
RIM1YCR028C-A RSC1P53236 928 aa3.29□□□□□ -1.88
RIM1YCR028C-A YGR126WP53274 230 aa3.29□□□□□ -1.88
RIM1YCR028C-A BUD32P53323 261 aa3.29□□□□□ -1.88
RIM1YCR028C-A RHO4Q00246 291 aa3.29□□□□□ -1.88
RIM1YCR028C-A CSI1Q04368 295 aa3.29□□□□□ -1.88
RIM1YCR028C-A YTH1Q06102 208 aaPredicted RBP3.29□□□□□ -1.88
RIM1YCR028C-A THI20Q08224 551 aa3.29□□□□□ -1.88
RIM1YCR028C-A YPT6Q99260 215 aa3.29□□□□□ -1.88
RIM1YCR028C-A ROM2P51862 1356 aaKnown RBP3.28□□□□□ -1.88
RIM1YCR028C-A MRS3P10566 314 aa3.28□□□□□ -1.88
RIM1YCR028C-A SGV1P23293 657 aaKnown RBP3.28□□□□□ -1.88
RIM1YCR028C-A SAC6P32599 642 aaKnown RBP3.28□□□□□ -1.88
RIM1YCR028C-A ECM15P35195 104 aa3.28□□□□□ -1.88
RIM1YCR028C-A YKL023WP36103 277 aaKnown RBP3.28□□□□□ -1.88
RIM1YCR028C-A NOP4P37838 685 aaKnown RBP3.28□□□□□ -1.88
RIM1YCR028C-A CIN4P39110 191 aa3.28□□□□□ -1.88
RIM1YCR028C-A YTA12P40341 825 aa3.28□□□□□ -1.88
RIM1YCR028C-A ALG5P40350 334 aa3.28□□□□□ -1.88
RIM1YCR028C-A HYR1P40581 163 aaKnown RBP3.28□□□□□ -1.88
RIM1YCR028C-A MDG1P53885 366 aa3.28□□□□□ -1.88
RIM1YCR028C-A YMR087WQ04299 284 aa3.28□□□□□ -1.88
RIM1YCR028C-A NCE102Q12207 173 aaRIP-Chip data3.28□□□□□ -1.88not detected
RIM1YCR028C-A DNF3Q12674 1656 aa3.27□□□□□ -1.89
RIM1YCR028C-A MLP1Q02455 1875 aaKnown RBP3.27□□□□□ -1.89
RIM1YCR028C-A APE1P14904 514 aa3.27□□□□□ -1.89
RIM1YCR028C-A TPM1P17536 199 aaKnown RBP3.27□□□□□ -1.89
RIM1YCR028C-A SGF29P25554 259 aa3.27□□□□□ -1.89
RIM1YCR028C-A RPN12P32496 274 aa3.27□□□□□ -1.89
RIM1YCR028C-A SEF1P34228 1148 aa3.27□□□□□ -1.89
RIM1YCR028C-A OSH3P38713 996 aaKnown RBP3.27□□□□□ -1.89
RIM1YCR028C-A TCD1P38756 429 aa3.27□□□□□ -1.89
RIM1YCR028C-A CCT6P39079 546 aa3.27□□□□□ -1.89
RIM1YCR028C-A VID30P53076 958 aa3.27□□□□□ -1.89
RIM1YCR028C-A VPS20Q04272 221 aa3.27□□□□□ -1.89
RIM1YCR028C-A RPC11Q04307 110 aaPredicted RBP3.27□□□□□ -1.89
RIM1YCR028C-A CTI6Q08923 506 aa3.27□□□□□ -1.89
RIM1YCR028C-A RCN2Q12044 265 aa3.27□□□□□ -1.89
RIM1YCR028C-A ADE6P38972 1358 aaKnown RBP3.26□□□□□ -1.89
RIM1YCR028C-A HSP104P31539 908 aaKnown RBP3.26□□□□□ -1.89
RIM1YCR028C-A RGT1P32862 1170 aa3.26□□□□□ -1.89
RIM1YCR028C-A SIP2P34164 415 aaKnown RBP3.26□□□□□ -1.89
RIM1YCR028C-A DHH1P39517 506 aaKnown RBP3.26□□□□□ -1.89
RIM1YCR028C-A CSM2P40465 213 aa3.26□□□□□ -1.89
RIM1YCR028C-A SGN1P40561 250 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
RIM1YCR028C-A MRX6P48564 524 aa3.26□□□□□ -1.89
RIM1YCR028C-A VPS38Q05919 439 aa3.26□□□□□ -1.89
RIM1YCR028C-A YJR112W-AQ3E743 109 aa3.26□□□□□ -1.89
RIM1YCR028C-A NCB2Q92317 146 aa3.26□□□□□ -1.89
RIM1YCR028C-A LYS2P07702 1392 aa3.25□□□□□ -1.89
RIM1YCR028C-A SHP1P34223 423 aa3.25□□□□□ -1.89
RIM1YCR028C-A MRPL10P36520 322 aa3.25□□□□□ -1.89
RIM1YCR028C-A REG2P38232 338 aa3.25□□□□□ -1.89
RIM1YCR028C-A MSR1P38714 643 aa3.25□□□□□ -1.89
RIM1YCR028C-A IMD4P50094 524 aaKnown RBP3.25□□□□□ -1.89
RIM1YCR028C-A ALT2P52892 507 aa3.25□□□□□ -1.89
RIM1YCR028C-A TOF2Q02208 771 aa3.25□□□□□ -1.89
RIM1YCR028C-A RPM2Q02773 1202 aa3.25□□□□□ -1.89
RIM1YCR028C-A COQ9Q05779 260 aa3.25□□□□□ -1.89
RIM1YCR028C-A YDL121CQ07541 149 aa3.25□□□□□ -1.89
RIM1YCR028C-A HSH49Q99181 213 aaPredicted RBP3.25□□□□□ -1.89
RIM1YCR028C-A GAL80P04387 435 aa3.24□□□□□ -1.89
RIM1YCR028C-A TOP1P04786 769 aa3.24□□□□□ -1.89
RIM1YCR028C-A RPL15AP05748 204 aaKnown RBP3.24□□□□□ -1.89
RIM1YCR028C-A PEP4P07267 405 aaKnown RBP3.24□□□□□ -1.89
RIM1YCR028C-A CBS1P14066 229 aa3.24□□□□□ -1.89
RIM1YCR028C-A OLE1P21147 510 aaKnown RBP3.24□□□□□ -1.89
RIM1YCR028C-A ATS1P31386 333 aa3.24□□□□□ -1.89
RIM1YCR028C-A NDC1P32500 655 aa3.24□□□□□ -1.89
RIM1YCR028C-A PTR2P32901 601 aa3.24□□□□□ -1.89
RIM1YCR028C-A MPE1P35728 441 aaKnown RBP3.24□□□□□ -1.89
RIM1YCR028C-A TCD2P36101 447 aaKnown RBP3.24□□□□□ -1.89
RIM1YCR028C-A YHR210CP38893 341 aa3.24□□□□□ -1.89
RIM1YCR028C-A VPS52P39904 641 aa3.24□□□□□ -1.89
RIM1YCR028C-A DRN1P53255 507 aaKnown RBP3.24□□□□□ -1.89
RIM1YCR028C-A RBG2P53295 368 aaKnown RBP3.24□□□□□ -1.89
RIM1YCR028C-A SLD5Q03406 294 aa3.24□□□□□ -1.89
RIM1YCR028C-A RTT103Q05543 409 aa3.24□□□□□ -1.89
RIM1YCR028C-A SYO1Q07395 620 aa3.24□□□□□ -1.89
RIM1YCR028C-A THP1Q08231 455 aa3.24□□□□□ -1.89
RIM1YCR028C-A YOR365CQ08844 703 aa3.24□□□□□ -1.89
RIM1YCR028C-A RAD52P06778 471 aaKnown RBP3.23□□□□□ -1.89
RIM1YCR028C-A MRP7P12687 371 aa3.23□□□□□ -1.89
RIM1YCR028C-A MTF1P14908 341 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms