RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W MDM12Q92328 271 aa7.02□□□□□ -1.29
TOD6YBL054W PEX1P24004 1043 aa7.01□□□□□ -1.29
TOD6YBL054W DBP2P24783 546 aaKnown RBP7.01□□□□□ -1.29
TOD6YBL054W YBR225WP38321 900 aa7.01□□□□□ -1.29
TOD6YBL054W LEU5P38702 357 aa7.01□□□□□ -1.29
TOD6YBL054W HAT2P39984 401 aa7.01□□□□□ -1.29
TOD6YBL054W NIT1P40447 199 aa7.01□□□□□ -1.29
TOD6YBL054W FKH2P41813 862 aa7.01□□□□□ -1.29
TOD6YBL054W PTR3P43606 678 aa7.01□□□□□ -1.29
TOD6YBL054W GCD14P46959 383 aaPredicted RBP7.01□□□□□ -1.29
TOD6YBL054W NAS6P50086 228 aa7.01□□□□□ -1.29
TOD6YBL054W BOL2P53082 120 aa7.01□□□□□ -1.29
TOD6YBL054W TPN1P53099 579 aa7.01□□□□□ -1.29
TOD6YBL054W GND2P53319 492 aa7.01□□□□□ -1.29
TOD6YBL054W NRD1P53617 575 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29 RIP-Chip
TOD6YBL054W KTR6P54070 446 aa7.01□□□□□ -1.29
TOD6YBL054W YAT1P80235 687 aa7.01□□□□□ -1.29
TOD6YBL054W BLS1Q06071 122 aa7.01□□□□□ -1.29
TOD6YBL054W VTA1Q06263 330 aa7.01□□□□□ -1.29
TOD6YBL054W MRN1Q08925 612 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
TOD6YBL054W ERP3Q12403 225 aa7.01□□□□□ -1.29
TOD6YBL054W SEC53P07283 254 aaKnown RBP7□□□□□ -1.29
TOD6YBL054W FBP1P09201 348 aa7□□□□□ -1.29
TOD6YBL054W DBP3P20447 523 aaKnown RBP7□□□□□ -1.29
TOD6YBL054W SGV1P23293 657 aaKnown RBP7□□□□□ -1.29
TOD6YBL054W GRR1P24814 1151 aa7□□□□□ -1.29
TOD6YBL054W SDH3P33421 198 aa7□□□□□ -1.29
TOD6YBL054W ERV46P39727 415 aa7□□□□□ -1.29
TOD6YBL054W YEL028WP39989 153 aa7□□□□□ -1.29
TOD6YBL054W ARF3P40994 183 aaRIP-Chip data7□□□□□ -1.29not detected
TOD6YBL054W SSY5P47002 699 aa7□□□□□ -1.29
TOD6YBL054W HXT16P47185 567 aa7□□□□□ -1.29
TOD6YBL054W ARH1P48360 493 aa7□□□□□ -1.29
TOD6YBL054W SIW14P53965 281 aa7□□□□□ -1.29
TOD6YBL054W MET14Q02196 202 aa7□□□□□ -1.29
TOD6YBL054W RSC4Q02206 625 aa7□□□□□ -1.29
TOD6YBL054W TRM44Q02648 567 aaKnown RBP7□□□□□ -1.29
TOD6YBL054W EFR3Q03653 782 aaKnown RBP7□□□□□ -1.29
TOD6YBL054W PDR8Q06149 701 aa7□□□□□ -1.29
TOD6YBL054W DBP9Q06218 594 aaKnown RBP7□□□□□ -1.29
TOD6YBL054W HRK1Q08732 759 aaKnown RBP7□□□□□ -1.29
TOD6YBL054W GPB1Q08886 897 aa7□□□□□ -1.29
TOD6YBL054W FEX1Q08913 375 aa7□□□□□ -1.29
TOD6YBL054W MCD1Q12158 566 aa7□□□□□ -1.29
TOD6YBL054W HTA2P04912 132 aa6.99□□□□□ -1.29
TOD6YBL054W NCP1P16603 691 aaKnown RBP6.99□□□□□ -1.29
TOD6YBL054W HXT2P23585 541 aa6.99□□□□□ -1.29
TOD6YBL054W PKC1P24583 1151 aa6.99□□□□□ -1.29
TOD6YBL054W IXR1P33417 597 aa6.99□□□□□ -1.29
TOD6YBL054W SCD5P34758 872 aa6.99□□□□□ -1.29
TOD6YBL054W JEN1P36035 616 aa6.99□□□□□ -1.29
TOD6YBL054W YHR045WP38775 560 aa6.99□□□□□ -1.29
TOD6YBL054W FSH1P38777 243 aaKnown RBP6.99□□□□□ -1.29
TOD6YBL054W DUN1P39009 513 aa6.99□□□□□ -1.29
TOD6YBL054W RSP5P39940 809 aaKnown RBP6.99□□□□□ -1.29
TOD6YBL054W ESL1P40456 1118 aa6.99□□□□□ -1.29
TOD6YBL054W YJL007CP47080 104 aa6.99□□□□□ -1.29
TOD6YBL054W RPS12P48589 143 aaKnown RBP6.99□□□□□ -1.29
TOD6YBL054W YPT32P51996 222 aaKnown RBP6.99□□□□□ -1.29
TOD6YBL054W PET117Q02771 107 aa6.99□□□□□ -1.29
TOD6YBL054W YPL034WQ03083 165 aa6.99□□□□□ -1.29
TOD6YBL054W PEX29Q03370 554 aa6.99□□□□□ -1.29
TOD6YBL054W GOT1Q03554 138 aa6.99□□□□□ -1.29
TOD6YBL054W RPN9Q04062 393 aaKnown RBP6.99□□□□□ -1.29
TOD6YBL054W SPO20Q04359 397 aa6.99□□□□□ -1.29
TOD6YBL054W THP1Q08231 455 aa6.99□□□□□ -1.29
TOD6YBL054W NUS1Q12063 375 aa6.99□□□□□ -1.29
TOD6YBL054W YLR126CQ12288 251 aa6.99□□□□□ -1.29
TOD6YBL054W LSO2Q3E772 92 aaKnown RBP6.99□□□□□ -1.29
TOD6YBL054W IPP1P00817 287 aaKnown RBP6.99□□□□□ -1.29
TOD6YBL054W PER1P25625 357 aa6.99□□□□□ -1.29
TOD6YBL054W RNP1P32385 249 aa6.99□□□□□ -1.29
TOD6YBL054W ANR2P36090 516 aaPredicted RBP6.99□□□□□ -1.29
TOD6YBL054W YBR137WP38276 179 aa6.99□□□□□ -1.29
TOD6YBL054W PRM9P39551 298 aa6.99□□□□□ -1.29
TOD6YBL054W AYR1P40471 297 aa6.99□□□□□ -1.29
TOD6YBL054W ROK1P45818 564 aaPredicted RBP6.99□□□□□ -1.29
TOD6YBL054W RPS7BP48164 190 aaKnown RBP6.99□□□□□ -1.29
TOD6YBL054W GTO1P48239 356 aa6.99□□□□□ -1.29
TOD6YBL054W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
TOD6YBL054W YPL071CQ02864 156 aa6.99□□□□□ -1.29
TOD6YBL054W RRN5Q02983 363 aa6.99□□□□□ -1.29
TOD6YBL054W YMD8Q03697 442 aa6.99□□□□□ -1.29
TOD6YBL054W ARX1Q03862 593 aaKnown RBP6.99□□□□□ -1.29
TOD6YBL054W YDR109CQ04585 715 aa6.99□□□□□ -1.29
TOD6YBL054W DXO1Q06349 442 aa6.99□□□□□ -1.29
TOD6YBL054W MLC2Q06580 163 aa6.99□□□□□ -1.29
TOD6YBL054W RSC3Q06639 885 aa6.99□□□□□ -1.29
TOD6YBL054W MCA1Q08601 432 aa6.99□□□□□ -1.29
TOD6YBL054W FEX2Q08991 375 aa6.99□□□□□ -1.29
TOD6YBL054W PNS1Q12412 539 aa6.99□□□□□ -1.29
TOD6YBL054W RAS2P01120 322 aaKnown RBP6.98□□□□□ -1.29
TOD6YBL054W CBP1P07252 654 aa6.98□□□□□ -1.29
TOD6YBL054W ALG7P07286 448 aa6.98□□□□□ -1.29
TOD6YBL054W PET494P07390 489 aaPredicted RBP6.98□□□□□ -1.29
TOD6YBL054W SDH2P21801 266 aa6.98□□□□□ -1.29
TOD6YBL054W IDP1P21954 428 aaKnown RBP6.98□□□□□ -1.29
TOD6YBL054W PEX34P25584 144 aa6.98□□□□□ -1.29
TOD6YBL054W HYM1P32464 399 aa6.98□□□□□ -1.29
TOD6YBL054W HIS7P33734 552 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms