RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
NUP60YAR002W MCH5Q08777 521 aa3.36□□□□□ -1.87
NUP60YAR002W NUS1Q12063 375 aa3.36□□□□□ -1.87
NUP60YAR002W HAL9Q12180 1030 aa3.36□□□□□ -1.87
NUP60YAR002W UBX3Q12229 455 aa3.36□□□□□ -1.87
NUP60YAR002W ATG34Q12292 412 aa3.36□□□□□ -1.87
NUP60YAR002W YBR182C-AQ8TGU6 64 aa3.36□□□□□ -1.87
NUP60YAR002W YLR149CQ99296 730 aa3.36□□□□□ -1.87
NUP60YAR002W HEM2P05373 342 aa3.35□□□□□ -1.87
NUP60YAR002W SEC53P07283 254 aaKnown RBP3.35□□□□□ -1.87
NUP60YAR002W ABF1P14164 731 aa3.35□□□□□ -1.87
NUP60YAR002W AMD1P15274 810 aaKnown RBP3.35□□□□□ -1.87
NUP60YAR002W PDE1P22434 369 aa3.35□□□□□ -1.87
NUP60YAR002W MIH1P23748 554 aa3.35□□□□□ -1.87
NUP60YAR002W DCC1P25559 380 aa3.35□□□□□ -1.87
NUP60YAR002W YCR099CP25657 155 aa3.35□□□□□ -1.87
NUP60YAR002W CCR4P31384 837 aaKnown RBP3.35□□□□□ -1.87
NUP60YAR002W TFC1P32367 649 aa3.35□□□□□ -1.87
NUP60YAR002W MF(ALPHA)2P32435 120 aa3.35□□□□□ -1.87
NUP60YAR002W DPH5P32469 300 aaPredicted RBP3.35□□□□□ -1.87
NUP60YAR002W PTM1P32857 523 aa3.35□□□□□ -1.87
NUP60YAR002W PTH2P34222 208 aa3.35□□□□□ -1.87
NUP60YAR002W PTC1P35182 281 aa3.35□□□□□ -1.87
NUP60YAR002W THI80P35202 319 aa3.35□□□□□ -1.87
NUP60YAR002W CTF13P35203 478 aa3.35□□□□□ -1.87
NUP60YAR002W SRP72P38688 640 aaKnown RBP3.35□□□□□ -1.87
NUP60YAR002W SFB3P38810 929 aa3.35□□□□□ -1.87
NUP60YAR002W RIX1P38883 763 aaPredicted RBP3.35□□□□□ -1.87
NUP60YAR002W PLB1P39105 664 aa3.35□□□□□ -1.87
NUP60YAR002W COA1P40452 197 aa3.35□□□□□ -1.87
NUP60YAR002W HPM1P40481 377 aa3.35□□□□□ -1.87
NUP60YAR002W GVP36P40531 326 aaKnown RBP3.35□□□□□ -1.87
NUP60YAR002W YIR016WP40572 265 aa3.35□□□□□ -1.87
NUP60YAR002W GCD14P46959 383 aaPredicted RBP3.35□□□□□ -1.87
NUP60YAR002W YGR016WP53209 190 aa3.35□□□□□ -1.87
NUP60YAR002W NOP19P53317 196 aaPredicted RBP3.35□□□□□ -1.87
NUP60YAR002W DYN3Q04949 312 aa3.35□□□□□ -1.87
NUP60YAR002W ATG26Q06321 1198 aa3.35□□□□□ -1.87
NUP60YAR002W ASA1Q06822 443 aa3.35□□□□□ -1.87
NUP60YAR002W YEH2Q07950 538 aa3.35□□□□□ -1.87
NUP60YAR002W ESA1Q08649 445 aa3.35□□□□□ -1.87
NUP60YAR002W TRE2Q08693 809 aa3.35□□□□□ -1.87
NUP60YAR002W MRH1Q12117 320 aaPredicted RBP3.35□□□□□ -1.87
NUP60YAR002W TAF3Q12297 353 aa3.35□□□□□ -1.87
NUP60YAR002W ADF1Q2V2Q1 113 aa3.35□□□□□ -1.87
NUP60YAR002W TUB1P09733 447 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W SCH9P11792 824 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W MTF1P14908 341 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W URA4P20051 364 aa3.34□□□□□ -1.87
NUP60YAR002W MRPS28P21771 286 aa3.34□□□□□ -1.87
NUP60YAR002W MRPL8P22353 238 aa3.34□□□□□ -1.87
NUP60YAR002W PHO3P24031 467 aa3.34□□□□□ -1.87
NUP60YAR002W RBK1P25332 333 aa3.34□□□□□ -1.87
NUP60YAR002W PCL2P25693 308 aa3.34□□□□□ -1.87
NUP60YAR002W HOG1P32485 435 aa3.34□□□□□ -1.87
NUP60YAR002W STE14P32584 239 aa3.34□□□□□ -1.87
NUP60YAR002W YME2P32843 850 aa3.34□□□□□ -1.87
NUP60YAR002W SGE1P33335 543 aa3.34□□□□□ -1.87
NUP60YAR002W SKT5P34226 696 aa3.34□□□□□ -1.87
NUP60YAR002W MRPL40P36534 297 aa3.34□□□□□ -1.87
NUP60YAR002W PDX3P38075 228 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W LDB7P38210 180 aa3.34□□□□□ -1.87
NUP60YAR002W STB5P38699 743 aa3.34□□□□□ -1.87
NUP60YAR002W GND1P38720 489 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W YHR078WP38799 552 aa3.34□□□□□ -1.87
NUP60YAR002W UTP9P38882 575 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W SCS2P40075 244 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W MMF1P40185 145 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W ALG8P40351 577 aa3.34□□□□□ -1.87
NUP60YAR002W SEC27P41811 889 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W TES1P41903 349 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W PET130P47065 347 aa3.34□□□□□ -1.87
NUP60YAR002W YJR154WP47181 346 aa3.34□□□□□ -1.87
NUP60YAR002W AMA1P50082 593 aa3.34□□□□□ -1.87
NUP60YAR002W IMA1P53051 589 aa3.34□□□□□ -1.87
NUP60YAR002W COG1P53079 417 aa3.34□□□□□ -1.87
NUP60YAR002W MET13P53128 600 aa3.34□□□□□ -1.87
NUP60YAR002W EFM5P53200 248 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W GTR2P53290 341 aa3.34□□□□□ -1.87
NUP60YAR002W ARC35P53731 342 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W IBD2P53892 351 aa3.34□□□□□ -1.87
NUP60YAR002W YML131WQ03102 365 aa3.34□□□□□ -1.87
NUP60YAR002W GOT1Q03554 138 aa3.34□□□□□ -1.87
NUP60YAR002W GAS3Q03655 524 aa3.34□□□□□ -1.87
NUP60YAR002W TAF12Q03761 539 aa3.34□□□□□ -1.87
NUP60YAR002W EMI2Q04409 500 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W GSF2Q04697 403 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W RTN1Q04947 295 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W SPC2Q04969 178 aa3.34□□□□□ -1.87
NUP60YAR002W HEL2Q05580 639 aaKnown RBP3.34□□□□□ -1.87
NUP60YAR002W GGA1Q06336 557 aa3.34□□□□□ -1.87
NUP60YAR002W MCP2Q06567 569 aa3.34□□□□□ -1.87
NUP60YAR002W BSP1Q06604 576 aa3.34□□□□□ -1.87
NUP60YAR002W YDL121CQ07541 149 aa3.34□□□□□ -1.87
NUP60YAR002W YOR387CQ08910 206 aa3.34□□□□□ -1.87
NUP60YAR002W GUP2Q08929 609 aa3.34□□□□□ -1.87
NUP60YAR002W YPQ1Q12010 308 aa3.34□□□□□ -1.87
NUP60YAR002W NSL1Q12143 216 aa3.34□□□□□ -1.87
NUP60YAR002W ICT1Q12385 394 aa3.34□□□□□ -1.87
NUP60YAR002W NPC2Q12408 173 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms