RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 TFRCP02786 760 aaKnown RBP24.58■■□□□ 1.53
SGMS1-210ENST00000619438 PGK2P07205 417 aa24.58■■□□□ 1.53
SGMS1-210ENST00000619438 SNHG28P0DPA3 235 aa24.58■■□□□ 1.53
SGMS1-210ENST00000619438 ME1P48163 572 aa24.58■■□□□ 1.53
SGMS1-210ENST00000619438 GJA8P48165 433 aa24.58■■□□□ 1.53
SGMS1-210ENST00000619438 CACNB2Q08289 660 aaPredicted RBP24.58■■□□□ 1.53
SGMS1-210ENST00000619438 BTNL9Q6UXG8 535 aa24.58■■□□□ 1.53
SGMS1-210ENST00000619438 ANKRD35Q8N283 1001 aa24.58■■□□□ 1.53
SGMS1-210ENST00000619438 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.58■■□□□ 1.53
SGMS1-210ENST00000619438 FLRT1Q9NZU1 646 aa24.58■■□□□ 1.53
SGMS1-210ENST00000619438 KIF28PB7ZC32 967 aa24.57■■□□□ 1.52
SGMS1-210ENST00000619438 SSRP1Q08945 709 aaKnown RBP24.57■■□□□ 1.52
SGMS1-210ENST00000619438 SEC23AQ15436 765 aa24.57■■□□□ 1.52
SGMS1-210ENST00000619438 KRT40Q6A162 431 aa24.57■■□□□ 1.52
SGMS1-210ENST00000619438 CHST13Q8NET6 341 aa24.57■■□□□ 1.52
SGMS1-210ENST00000619438 U2AF1L4Q8WU68 220 aaKnown RBP24.57■■□□□ 1.52
SGMS1-210ENST00000619438 USP25Q9UHP3 1055 aa24.57■■□□□ 1.52
SGMS1-210ENST00000619438 PCDHA7Q9UN72 937 aa24.57■■□□□ 1.52
SGMS1-210ENST00000619438 SGPL1O95470 568 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 ALAS1P13196 640 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 RXRAP19793 462 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 MSNP26038 577 aaKnown RBP24.56■■□□□ 1.52
SGMS1-210ENST00000619438 U2AF2P26368 475 aaKnown RBP eCLIP24.56■■□□□ 1.522e-6■■■■□ 21.4
SGMS1-210ENST00000619438 RTN1Q16799 776 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 SASS6Q6UVJ0 657 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 GOLPH3LQ9H4A5 285 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 ZKSCAN5Q9Y2L8 839 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 PARP1P09874 1014 aaKnown RBP24.56■■□□□ 1.52
SGMS1-210ENST00000619438 CYP2C19P33261 490 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 STK38Q15208 465 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 CKAP2LQ8IYA6 745 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 MRPS27Q92552 414 aaKnown RBP24.56■■□□□ 1.52
SGMS1-210ENST00000619438 PHKBQ93100 1093 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 TRERF1Q96PN7 1200 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 UBA5Q9GZZ9 404 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 PAK6Q9NQU5 681 aaPredicted RBP24.56■■□□□ 1.52
SGMS1-210ENST00000619438 CCPG1Q9ULG6 757 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 CLIC4Q9Y696 253 aa24.56■■□□□ 1.52
SGMS1-210ENST00000619438 SPTLC2O15270 562 aa24.55■■□□□ 1.52
SGMS1-210ENST00000619438 ADCY5O95622 1261 aa24.55■■□□□ 1.52
SGMS1-210ENST00000619438 CNGA1P29973 690 aa24.55■■□□□ 1.52
SGMS1-210ENST00000619438 TRIM29Q14134 588 aa24.55■■□□□ 1.52
SGMS1-210ENST00000619438 ANO1Q5XXA6 986 aa24.55■■□□□ 1.52
SGMS1-210ENST00000619438 RANBP17Q9H2T7 1088 aaKnown RBP24.55■■□□□ 1.52
SGMS1-210ENST00000619438 GJB4Q9NTQ9 266 aa24.55■■□□□ 1.52
SGMS1-210ENST00000619438 ZNF536O15090 1300 aa24.55■■□□□ 1.52
SGMS1-210ENST00000619438 ZNF500O60304 480 aaPredicted RBP24.54■■□□□ 1.52
SGMS1-210ENST00000619438 KINO60870 393 aaKnown RBP24.54■■□□□ 1.52
SGMS1-210ENST00000619438 TKFCQ3LXA3 575 aa24.54■■□□□ 1.52
SGMS1-210ENST00000619438 ASPRV1Q53RT3 343 aa24.54■■□□□ 1.52
SGMS1-210ENST00000619438 MAP3K21Q5TCX8 1036 aa24.54■■□□□ 1.52
SGMS1-210ENST00000619438 OLFML2BQ68BL8 750 aa24.54■■□□□ 1.52
SGMS1-210ENST00000619438 ZNF654Q8IZM8 581 aa24.54■■□□□ 1.52
SGMS1-210ENST00000619438 FMR1NBQ8N0W7 255 aaPredicted RBP24.54■■□□□ 1.52
SGMS1-210ENST00000619438 FSIP1Q8NA03 581 aa24.54■■□□□ 1.52
SGMS1-210ENST00000619438 MAML3Q96JK9 1138 aa24.54■■□□□ 1.52
SGMS1-210ENST00000619438 MYL10Q9BUA6 226 aa24.54■■□□□ 1.52
SGMS1-210ENST00000619438 ACAD9Q9H845 621 aa24.54■■□□□ 1.52
SGMS1-210ENST00000619438 RNF146Q9NTX7 359 aa24.54■■□□□ 1.52
SGMS1-210ENST00000619438 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.54■■□□□ 1.52
SGMS1-210ENST00000619438 ICAM1P05362 532 aa24.53■■□□□ 1.52
SGMS1-210ENST00000619438 TRIM22Q8IYM9 498 aa24.53■■□□□ 1.52
SGMS1-210ENST00000619438 AIFM3Q96NN9 605 aa24.53■■□□□ 1.52
SGMS1-210ENST00000619438 SLC39A14Q15043 492 aa24.53■■□□□ 1.52
SGMS1-210ENST00000619438 SF3A1Q15459 793 aaKnown RBP24.53■■□□□ 1.52
SGMS1-210ENST00000619438 CCDC144CPQ8IYA2 1237 aa24.53■■□□□ 1.52
SGMS1-210ENST00000619438 FANCBQ8NB91 859 aa24.53■■□□□ 1.52
SGMS1-210ENST00000619438 SLC26A6Q9BXS9 759 aa24.53■■□□□ 1.52
SGMS1-210ENST00000619438 CPVLQ9H3G5 476 aa24.53■■□□□ 1.52
SGMS1-210ENST00000619438 DIS3Q9Y2L1 958 aaKnown RBP24.53■■□□□ 1.52
SGMS1-210ENST00000619438 ZNFX1Q9P2E3 1918 aaKnown RBP24.52■■□□□ 1.52
SGMS1-210ENST00000619438 CCND3P30281 292 aaPredicted RBP24.52■■□□□ 1.52
SGMS1-210ENST00000619438 ZNF792Q3KQV3 632 aa24.52■■□□□ 1.52
SGMS1-210ENST00000619438 ANO6Q4KMQ2 910 aa24.52■■□□□ 1.52
SGMS1-210ENST00000619438 SHISA4Q96DD7 197 aa24.52■■□□□ 1.52
SGMS1-210ENST00000619438 VAT1LQ9HCJ6 419 aa24.52■■□□□ 1.52
SGMS1-210ENST00000619438 PPP6R2O75170 966 aa24.51■■□□□ 1.51
SGMS1-210ENST00000619438 DEXIO95424 95 aa24.51■■□□□ 1.51
SGMS1-210ENST00000619438 CATIPQ7Z7H3 387 aa24.51■■□□□ 1.51
SGMS1-210ENST00000619438 CBX8Q9HC52 389 aa24.51■■□□□ 1.51
SGMS1-210ENST00000619438 PNMA2Q9UL42 364 aa24.51■■□□□ 1.51
SGMS1-210ENST00000619438 CAPN2P17655 700 aa24.5■■□□□ 1.51
SGMS1-210ENST00000619438 CMA1P23946 247 aa24.5■■□□□ 1.51
SGMS1-210ENST00000619438 AXDND1Q5T1B0 1012 aaPredicted RBP24.5■■□□□ 1.51
SGMS1-210ENST00000619438 ADGRF4Q8IZF3 695 aa24.5■■□□□ 1.51
SGMS1-210ENST00000619438 TINF2Q9BSI4 451 aa24.5■■□□□ 1.51
SGMS1-210ENST00000619438 KLRF2D3W0D1 207 aa24.49■■□□□ 1.51
SGMS1-210ENST00000619438 PTMAP06454 111 aaKnown RBP24.49■■□□□ 1.51
SGMS1-210ENST00000619438 CALM1P0DP23 149 aa24.49■■□□□ 1.51
SGMS1-210ENST00000619438 CALM2P0DP24 149 aa24.49■■□□□ 1.51
SGMS1-210ENST00000619438 CALM3P0DP25 149 aa24.49■■□□□ 1.51
SGMS1-210ENST00000619438 PRAMEF19Q5SWL8 479 aa24.49■■□□□ 1.51
SGMS1-210ENST00000619438 STAG2Q8N3U4 1231 aa24.49■■□□□ 1.51
SGMS1-210ENST00000619438 RNF26Q9BY78 433 aaPredicted RBP24.49■■□□□ 1.51
SGMS1-210ENST00000619438 ZNF236Q9UL36 1845 aa24.48■■□□□ 1.51
SGMS1-210ENST00000619438 POTEB2H3BUK9 544 aa24.48■■□□□ 1.51
SGMS1-210ENST00000619438 MMP1P03956 469 aa24.48■■□□□ 1.51
SGMS1-210ENST00000619438 STX1AQ16623 288 aa24.48■■□□□ 1.51
SGMS1-210ENST00000619438 MUM1L1Q5H9M0 696 aa24.48■■□□□ 1.51
SGMS1-210ENST00000619438 NSMFQ6X4W1 530 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms