RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 LY9Q9HBG7 655 aa22.26■■□□□ 1.15
CTSA-217ENST00000607482 POLR3EQ9NVU0 708 aa22.26■■□□□ 1.15
CTSA-217ENST00000607482 SLC12A7Q9Y666 1083 aa22.26■■□□□ 1.15
CTSA-217ENST00000607482 KIAA0355O15063 1070 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 CALM1P0DP23 149 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 CALM2P0DP24 149 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 CALM3P0DP25 149 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 PTGS1P23219 599 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 NKX3-2P78367 333 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 FAAP100Q0VG06 881 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 ITGA7Q13683 1181 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 NECTIN1Q15223 517 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 LRIT3Q3SXY7 679 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 LRCH3Q96II8 777 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 LZTS2Q9BRK4 669 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 MYL10Q9BUA6 226 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 SEZ6LQ9BYH1 1024 aa22.25■■□□□ 1.15
CTSA-217ENST00000607482 GCOM1H8Y6P7 765 aaPredicted RBP22.24■■□□□ 1.15
CTSA-217ENST00000607482 SOX1O00570 391 aaPredicted RBP22.24■■□□□ 1.15
CTSA-217ENST00000607482 CTAGE5O15320 804 aa22.24■■□□□ 1.15
CTSA-217ENST00000607482 POLR2MP0CAP2 368 aa22.24■■□□□ 1.15
CTSA-217ENST00000607482 MYCLP12524 364 aaPredicted RBP22.24■■□□□ 1.15
CTSA-217ENST00000607482 EDNRBP24530 442 aa22.24■■□□□ 1.15
CTSA-217ENST00000607482 CHMP4BP1P59074 171 aa22.24■■□□□ 1.15
CTSA-217ENST00000607482 FGD1P98174 961 aa22.24■■□□□ 1.15
CTSA-217ENST00000607482 FPGSQ05932 587 aa22.24■■□□□ 1.15
CTSA-217ENST00000607482 TMEM63BQ5T3F8 832 aa22.24■■□□□ 1.15
CTSA-217ENST00000607482 RIOX1Q9H6W3 641 aa22.24■■□□□ 1.15
CTSA-217ENST00000607482 MAP3K20Q9NYL2 800 aaKnown RBP22.24■■□□□ 1.15
CTSA-217ENST00000607482 MYH6P13533 1939 aa22.23■■□□□ 1.15
CTSA-217ENST00000607482 RBM47A0AV96 593 aaKnown RBP22.23■■□□□ 1.15
CTSA-217ENST00000607482 SH2B2O14492 632 aaPredicted RBP22.23■■□□□ 1.15
CTSA-217ENST00000607482 HOXA13P31271 388 aaPredicted RBP22.23■■□□□ 1.15
CTSA-217ENST00000607482 FCHSD1Q86WN1 690 aa22.23■■□□□ 1.15
CTSA-217ENST00000607482 SAMD3Q8N6K7 520 aa22.23■■□□□ 1.15
CTSA-217ENST00000607482 MTMR8Q96EF0 704 aa22.23■■□□□ 1.15
CTSA-217ENST00000607482 NEK1Q96PY6 1258 aa22.23■■□□□ 1.15
CTSA-217ENST00000607482 MAP3K14Q99558 947 aa22.23■■□□□ 1.15
CTSA-217ENST00000607482 KPNA6O60684 536 aa22.22■■□□□ 1.15
CTSA-217ENST00000607482 EIF3JO75822 258 aaKnown RBP22.22■■□□□ 1.15
CTSA-217ENST00000607482 TIMP1P01033 207 aa22.22■■□□□ 1.15
CTSA-217ENST00000607482 CDK7P50613 346 aa22.22■■□□□ 1.15
CTSA-217ENST00000607482 KRT32Q14532 448 aa22.22■■□□□ 1.15
CTSA-217ENST00000607482 FAM47CQ5HY64 1035 aa22.22■■□□□ 1.15
CTSA-217ENST00000607482 CUL5Q93034 780 aa22.22■■□□□ 1.15
CTSA-217ENST00000607482 MTG1Q9BT17 334 aaPredicted RBP22.22■■□□□ 1.15
CTSA-217ENST00000607482 LRRC2Q9BYS8 371 aa22.22■■□□□ 1.15
CTSA-217ENST00000607482 PXMP2Q9NR77 195 aa22.22■■□□□ 1.15
CTSA-217ENST00000607482 COL20A1Q9P218 1284 aa22.22■■□□□ 1.15
CTSA-217ENST00000607482 PPP1R11O60927 126 aaPredicted RBP22.21■■□□□ 1.15
CTSA-217ENST00000607482 NR3C2P08235 984 aa22.21■■□□□ 1.15
CTSA-217ENST00000607482 LIFRP42702 1097 aa22.21■■□□□ 1.15
CTSA-217ENST00000607482 HSD17B4P51659 736 aa22.21■■□□□ 1.15
CTSA-217ENST00000607482 PSMC6P62333 389 aa22.21■■□□□ 1.15
CTSA-217ENST00000607482 TMEM199Q8N511 208 aa22.21■■□□□ 1.15
CTSA-217ENST00000607482 NAP1L2Q9ULW6 460 aaPredicted RBP22.21■■□□□ 1.15
CTSA-217ENST00000607482 MRVI1Q9Y6F6 885 aa22.21■■□□□ 1.15
CTSA-217ENST00000607482 GH1P01241 217 aa22.2■■□□□ 1.14
CTSA-217ENST00000607482 SHHQ15465 462 aa22.2■■□□□ 1.14
CTSA-217ENST00000607482 FAM126BQ8IXS8 530 aa22.2■■□□□ 1.14
CTSA-217ENST00000607482 COPS5Q92905 334 aa22.2■■□□□ 1.14
CTSA-217ENST00000607482 PPP1R12CQ9BZL4 782 aa22.2■■□□□ 1.14
CTSA-217ENST00000607482 LCTP09848 1927 aa22.19■■□□□ 1.14
CTSA-217ENST00000607482 CYTH3O43739 400 aa22.19■■□□□ 1.14
CTSA-217ENST00000607482 RXRAP19793 462 aa22.19■■□□□ 1.14
CTSA-217ENST00000607482 CCND2P30279 289 aa22.19■■□□□ 1.14
CTSA-217ENST00000607482 LY6KQ17RY6 165 aa22.19■■□□□ 1.14
CTSA-217ENST00000607482 MICU3Q86XE3 530 aa22.19■■□□□ 1.14
CTSA-217ENST00000607482 RAB11FIP4Q86YS3 637 aa22.19■■□□□ 1.14
CTSA-217ENST00000607482 SMARCC2Q8TAQ2 1214 aa22.19■■□□□ 1.14
CTSA-217ENST00000607482 RNPC3Q96LT9 517 aaKnown RBP22.19■■□□□ 1.14
CTSA-217ENST00000607482 SPZ1Q9BXG8 430 aa22.19■■□□□ 1.14
CTSA-217ENST00000607482 LRRC37A2A6NM11 1700 aa22.19■■□□□ 1.14
CTSA-217ENST00000607482 HMGB1P09429 215 aaKnown RBP22.18■■□□□ 1.14
CTSA-217ENST00000607482 SUPT20HL2P0C7V6 817 aa22.18■■□□□ 1.14
CTSA-217ENST00000607482 ITGB8P26012 769 aa22.18■■□□□ 1.14
CTSA-217ENST00000607482 SMARCA1P28370 1054 aa22.18■■□□□ 1.14
CTSA-217ENST00000607482 PURAQ00577 322 aaKnown RBP22.18■■□□□ 1.14
CTSA-217ENST00000607482 PPIGQ13427 754 aaKnown RBP eCLIP22.18■■□□□ 1.143e-15■■■□□ 17.7
CTSA-217ENST00000607482 MFSD5Q6N075 450 aa22.18■■□□□ 1.14
CTSA-217ENST00000607482 GPR153Q6NV75 609 aa22.18■■□□□ 1.14
CTSA-217ENST00000607482 CCDC82Q8N4S0 544 aa22.18■■□□□ 1.14
CTSA-217ENST00000607482 DEFB123Q8N688 67 aa22.18■■□□□ 1.14
CTSA-217ENST00000607482 TBX21Q9UL17 535 aa22.18■■□□□ 1.14
CTSA-217ENST00000607482 NOD1Q9Y239 953 aa22.18■■□□□ 1.14
CTSA-217ENST00000607482 REC8O95072 547 aa22.17■■□□□ 1.14
CTSA-217ENST00000607482 C9orf50Q5SZB4 431 aa22.17■■□□□ 1.14
CTSA-217ENST00000607482 KCNV1Q6PIU1 500 aa22.17■■□□□ 1.14
CTSA-217ENST00000607482 DHX32Q7L7V1 743 aaKnown RBP22.17■■□□□ 1.14
CTSA-217ENST00000607482 DHX37Q8IY37 1157 aaKnown RBP22.17■■□□□ 1.14
CTSA-217ENST00000607482 CMTR1Q8N1G2 835 aaKnown RBP22.17■■□□□ 1.14
CTSA-217ENST00000607482 FANCBQ8NB91 859 aa22.17■■□□□ 1.14
CTSA-217ENST00000607482 AFG1LQ8WV93 481 aa22.17■■□□□ 1.14
CTSA-217ENST00000607482 PDCD2LQ9BRP1 358 aa22.17■■□□□ 1.14
CTSA-217ENST00000607482 TRPV6Q9H1D0 765 aa22.17■■□□□ 1.14
CTSA-217ENST00000607482 HIPK3Q9H422 1215 aa22.17■■□□□ 1.14
CTSA-217ENST00000607482 LAMA3Q16787 3333 aa22.16■■□□□ 1.14
CTSA-217ENST00000607482 A6NJR5 290 aa22.16■■□□□ 1.14
CTSA-217ENST00000607482 OPLAHO14841 1288 aa22.16■■□□□ 1.14
CTSA-217ENST00000607482 ARIH2O95376 493 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms