RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 SIT1Q9Y3P8 196 aa7□□□□□ -1.29
RPRD1A-203ENST00000585879 C7orf72A4D263 438 aa6.99□□□□□ -1.29
RPRD1A-203ENST00000585879 C2orf71A6NGG8 1288 aa6.99□□□□□ -1.29
RPRD1A-203ENST00000585879 PDIA4P13667 645 aaKnown RBP6.99□□□□□ -1.29
RPRD1A-203ENST00000585879 CCDC27Q2M243 656 aa6.99□□□□□ -1.29
RPRD1A-203ENST00000585879 PRR31Q5SQ13 230 aa6.99□□□□□ -1.29
RPRD1A-203ENST00000585879 FBXW10Q5XX13 1052 aa6.99□□□□□ -1.29
RPRD1A-203ENST00000585879 MIB1Q86YT6 1006 aa6.99□□□□□ -1.29
RPRD1A-203ENST00000585879 BCL2L13Q9BXK5 485 aa6.99□□□□□ -1.29
RPRD1A-203ENST00000585879 SCAND2PQ9GZW5 306 aaPredicted RBP6.99□□□□□ -1.29
RPRD1A-203ENST00000585879 MROH6A6NGR9 719 aa6.98□□□□□ -1.29
RPRD1A-203ENST00000585879 NTRK1P04629 796 aa6.98□□□□□ -1.29
RPRD1A-203ENST00000585879 PAMP19021 973 aa6.98□□□□□ -1.29
RPRD1A-203ENST00000585879 DPY19L1Q2PZI1 675 aa6.98□□□□□ -1.29
RPRD1A-203ENST00000585879 ZNF326Q5BKZ1 582 aaKnown RBP6.98□□□□□ -1.29
RPRD1A-203ENST00000585879 ETV3LQ6ZN32 361 aa6.98□□□□□ -1.29
RPRD1A-203ENST00000585879 Q8N1X5 172 aa6.98□□□□□ -1.29
RPRD1A-203ENST00000585879 ARHGEF39Q8N4T4 335 aa6.98□□□□□ -1.29
RPRD1A-203ENST00000585879 PLEKHO2Q8TD55 490 aa6.98□□□□□ -1.29
RPRD1A-203ENST00000585879 GIPC2Q8TF65 315 aa6.98□□□□□ -1.29
RPRD1A-203ENST00000585879 CGGBP1Q9UFW8 167 aaPredicted RBP6.98□□□□□ -1.29
RPRD1A-203ENST00000585879 TRBV23OR9-2A0A075B6M9 112 aa6.97□□□□□ -1.29
RPRD1A-203ENST00000585879 NPHP3-ACAD11A0A0J9YXS1 232 aa6.97□□□□□ -1.29
RPRD1A-203ENST00000585879 C6P13671 934 aa6.97□□□□□ -1.29
RPRD1A-203ENST00000585879 GRB10Q13322 594 aa6.97□□□□□ -1.29
RPRD1A-203ENST00000585879 CDSNQ15517 529 aa6.97□□□□□ -1.29
RPRD1A-203ENST00000585879 C9orf131Q5VYM1 1079 aa6.97□□□□□ -1.29
RPRD1A-203ENST00000585879 CHST13Q8NET6 341 aa6.97□□□□□ -1.29
RPRD1A-203ENST00000585879 USP33Q8TEY7 942 aa6.97□□□□□ -1.29
RPRD1A-203ENST00000585879 RCC1LQ96I51 464 aaKnown RBP6.97□□□□□ -1.29
RPRD1A-203ENST00000585879 GBP3Q9H0R5 595 aa6.97□□□□□ -1.29
RPRD1A-203ENST00000585879 NPHS1O60500 1241 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 EPHX1P07099 455 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 RBM10P98175 930 aaKnown RBP6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 AMPD2Q01433 879 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 GNPTABQ3T906 1256 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 HEATR6Q6AI08 1181 aaKnown RBP6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 MCTP2Q6DN12 878 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 BORAQ6PGQ7 559 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 LIMS2Q7Z4I7 341 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 FAM124AQ86V42 546 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 DCP2Q8IU60 420 aaKnown RBP6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 FAM26EQ8N5C1 309 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 TTLL6Q8N841 843 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 TMEM87AQ8NBN3 555 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 ST6GALNAC2Q9UJ37 374 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 SLC12A7Q9Y666 1083 aa6.96□□□□□ -1.3
RPRD1A-203ENST00000585879 SGSM2O43147 1006 aa6.95□□□□□ -1.3
RPRD1A-203ENST00000585879 FUCA1P04066 466 aa6.95□□□□□ -1.3
RPRD1A-203ENST00000585879 TACR2P21452 398 aa6.95□□□□□ -1.3
RPRD1A-203ENST00000585879 ITGA1P56199 1179 aa6.95□□□□□ -1.3
RPRD1A-203ENST00000585879 SPRED1Q7Z699 444 aa6.95□□□□□ -1.3
RPRD1A-203ENST00000585879 TXNDC5Q8NBS9 432 aaKnown RBP6.95□□□□□ -1.3
RPRD1A-203ENST00000585879 FGD4Q96M96 766 aa6.95□□□□□ -1.3
RPRD1A-203ENST00000585879 PHAXQ9H814 394 aaKnown RBP6.95□□□□□ -1.3
RPRD1A-203ENST00000585879 TSC22D4Q9Y3Q8 395 aa6.95□□□□□ -1.3
RPRD1A-203ENST00000585879 PPM1BO75688 479 aa6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 SLPIP03973 132 aa6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 ZNF76P36508 570 aa6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 ACVRL1P37023 503 aa6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 ZNF394Q53GI3 561 aa6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 MBLAC2Q68D91 279 aa6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 CRIP3Q6Q6R5 217 aa6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 GLB1LQ6UWU2 654 aa6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 SH3RF3Q8TEJ3 882 aaPredicted RBP6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 KLHL6Q8WZ60 621 aa6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 DPF3Q92784 378 aa6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 ZNF536O15090 1300 aa6.94□□□□□ -1.3
RPRD1A-203ENST00000585879 B4GALT3O60512 393 aa6.93□□□□□ -1.3
RPRD1A-203ENST00000585879 CD300LDQ6UXZ3 194 aa6.93□□□□□ -1.3
RPRD1A-203ENST00000585879 ADAT2Q7Z6V5 191 aaKnown RBP6.93□□□□□ -1.3
RPRD1A-203ENST00000585879 STK32CQ86UX6 486 aa6.93□□□□□ -1.3
RPRD1A-203ENST00000585879 ZNF513Q8N8E2 541 aaPredicted RBP6.93□□□□□ -1.3
RPRD1A-203ENST00000585879 C19orf47Q8N9M1 422 aaKnown RBP6.93□□□□□ -1.3
RPRD1A-203ENST00000585879 COPS5Q92905 334 aa6.93□□□□□ -1.3
RPRD1A-203ENST00000585879 MMP19Q99542 508 aa6.93□□□□□ -1.3
RPRD1A-203ENST00000585879 PPP4R1LQ9P1A2 415 aa6.93□□□□□ -1.3
RPRD1A-203ENST00000585879 PCDHB10Q9UN67 800 aa6.93□□□□□ -1.3
RPRD1A-203ENST00000585879 PCDHGB7Q9Y5F8 929 aa6.93□□□□□ -1.3
RPRD1A-203ENST00000585879 C9orf118A6NHY6 69 aa6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 OVOL3O00110 214 aa6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 DDX3XO00571 662 aaKnown RBP eCLIP6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 LAMTOR5O43504 91 aa6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 GDF5P43026 501 aa6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 HMGA2P52926 109 aa6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 FANCCQ00597 558 aa6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 SLC7A5Q01650 507 aa6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 CCDC81Q6ZN84 652 aa6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 LCORQ96JN0 433 aaPredicted RBP6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 AP5M1Q9H0R1 490 aa6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 CD248Q9HCU0 757 aa6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 MARCH2Q9P0N8 246 aa6.92□□□□□ -1.3
RPRD1A-203ENST00000585879 A0A1W2PQH9 124 aa6.91□□□□□ -1.3
RPRD1A-203ENST00000585879 CYR61O00622 381 aa6.91□□□□□ -1.3
RPRD1A-203ENST00000585879 ZNF28P17035 718 aa6.91□□□□□ -1.3
RPRD1A-203ENST00000585879 SLC6A11P48066 632 aa6.91□□□□□ -1.3
RPRD1A-203ENST00000585879 COL9A2Q14055 689 aaPredicted RBP6.91□□□□□ -1.3
RPRD1A-203ENST00000585879 ICAM4Q14773 271 aa6.91□□□□□ -1.3
RPRD1A-203ENST00000585879 SURF1Q15526 300 aa6.91□□□□□ -1.3
RPRD1A-203ENST00000585879 ZC3H18Q86VM9 953 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms