RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 AEBP2Q6ZN18 517 aaPredicted RBP31.92■■■□□ 2.7
RPRD1A-203ENST00000585879 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
RPRD1A-203ENST00000585879 SENP3Q9H4L4 574 aaPredicted RBP27.2■■□□□ 1.94
RPRD1A-203ENST00000585879 PHF23Q9BUL5 403 aaPredicted RBP26.85■■□□□ 1.89
RPRD1A-203ENST00000585879 FOXD1Q16676 465 aa25.38■■□□□ 1.65
RPRD1A-203ENST00000585879 PLPPR3Q6T4P5 718 aa24.11■■□□□ 1.45
RPRD1A-203ENST00000585879 MSH5O43196 834 aa23.75■■□□□ 1.39
RPRD1A-203ENST00000585879 PPP6R1Q9UPN7 881 aa23.69■■□□□ 1.38
RPRD1A-203ENST00000585879 PIAS4Q8N2W9 510 aaPredicted RBP23.66■■□□□ 1.38
RPRD1A-203ENST00000585879 ADRA2BP18089 450 aa23.58■■□□□ 1.37
RPRD1A-203ENST00000585879 POTEDQ86YR6 584 aa23.31■■□□□ 1.32
RPRD1A-203ENST00000585879 MAPK8IP2Q13387 824 aaPredicted RBP21.69■■□□□ 1.06
RPRD1A-203ENST00000585879 DMRT2Q9Y5R5 561 aa21.58■■□□□ 1.05
RPRD1A-203ENST00000585879 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
RPRD1A-203ENST00000585879 PPP4R3CPQ6ZMV5 832 aa21.12■□□□□ 0.97
RPRD1A-203ENST00000585879 HOXD11P31277 338 aaPredicted RBP20.78■□□□□ 0.92
RPRD1A-203ENST00000585879 CNKSR2Q8WXI2 1034 aa20.74■□□□□ 0.91
RPRD1A-203ENST00000585879 DCAF8L1A6NGE4 600 aa20.6■□□□□ 0.89
RPRD1A-203ENST00000585879 RNF216Q9NWF9 866 aaPredicted RBP20.58■□□□□ 0.89
RPRD1A-203ENST00000585879 CACNB1Q02641 598 aaPredicted RBP20.39■□□□□ 0.85
RPRD1A-203ENST00000585879 RNF39Q9H2S5 420 aa20.29■□□□□ 0.84
RPRD1A-203ENST00000585879 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
RPRD1A-203ENST00000585879 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
RPRD1A-203ENST00000585879 NPM3O75607 178 aaKnown RBP20.01■□□□□ 0.79
RPRD1A-203ENST00000585879 C1QBPQ07021 282 aaKnown RBP19.98■□□□□ 0.79
RPRD1A-203ENST00000585879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.72■□□□□ 0.75
RPRD1A-203ENST00000585879 KCNA4P22459 653 aa19.56■□□□□ 0.72
RPRD1A-203ENST00000585879 U3KPZ7 1027 aaPredicted RBP19.36■□□□□ 0.69
RPRD1A-203ENST00000585879 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
RPRD1A-203ENST00000585879 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.64
RPRD1A-203ENST00000585879 CAPN15O75808 1086 aa19■□□□□ 0.63
RPRD1A-203ENST00000585879 DSG3P32926 999 aa18.98■□□□□ 0.63
RPRD1A-203ENST00000585879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
RPRD1A-203ENST00000585879 APLP2Q06481 763 aa18.75■□□□□ 0.59
RPRD1A-203ENST00000585879 HNRNPUL2Q1KMD3 747 aaKnown RBP18.75■□□□□ 0.59
RPRD1A-203ENST00000585879 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
RPRD1A-203ENST00000585879 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
RPRD1A-203ENST00000585879 SAMD1Q6SPF0 538 aaPredicted RBP18.65■□□□□ 0.58
RPRD1A-203ENST00000585879 ABCB7O75027 752 aa18.57■□□□□ 0.56
RPRD1A-203ENST00000585879 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
RPRD1A-203ENST00000585879 SLC4A1APQ9BWU0 796 aaKnown RBP18.43■□□□□ 0.54
RPRD1A-203ENST00000585879 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
RPRD1A-203ENST00000585879 POTEHQ6S545 545 aa18.25■□□□□ 0.51
RPRD1A-203ENST00000585879 POLA2Q14181 598 aa18.2■□□□□ 0.5
RPRD1A-203ENST00000585879 ATF5Q9Y2D1 282 aaPredicted RBP18.09■□□□□ 0.49
RPRD1A-203ENST00000585879 RBM42Q9BTD8 480 aaKnown RBP18.07■□□□□ 0.48
RPRD1A-203ENST00000585879 ZBTB22O15209 634 aa18.02■□□□□ 0.48
RPRD1A-203ENST00000585879 ZBTB12Q9Y330 459 aaPredicted RBP17.81■□□□□ 0.44
RPRD1A-203ENST00000585879 ATXN8OSP0DMR3 200 aa17.73■□□□□ 0.43
RPRD1A-203ENST00000585879 CHRDL2Q6WN34 429 aa17.71■□□□□ 0.43
RPRD1A-203ENST00000585879 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
RPRD1A-203ENST00000585879 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
RPRD1A-203ENST00000585879 REM2Q8IYK8 340 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-203ENST00000585879 FBLN2P98095 1184 aa17.33■□□□□ 0.36
RPRD1A-203ENST00000585879 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
RPRD1A-203ENST00000585879 SPDYE2BA6NHP3 402 aa17.29■□□□□ 0.36
RPRD1A-203ENST00000585879 SPDYE6P0CI01 402 aa17.29■□□□□ 0.36
RPRD1A-203ENST00000585879 SPDYE2Q495Y8 402 aa17.29■□□□□ 0.36
RPRD1A-203ENST00000585879 PIP4P2Q8N4L2 257 aa17.28■□□□□ 0.36
RPRD1A-203ENST00000585879 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
RPRD1A-203ENST00000585879 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
RPRD1A-203ENST00000585879 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
RPRD1A-203ENST00000585879 SSUH2Q9Y2M2 353 aa17.08■□□□□ 0.32
RPRD1A-203ENST00000585879 SP7Q8TDD2 431 aaPredicted RBP17.07■□□□□ 0.32
RPRD1A-203ENST00000585879 ZNF692Q9BU19 519 aaPredicted RBP17.04■□□□□ 0.32
RPRD1A-203ENST00000585879 SPDYE1Q8NFV5 336 aaPredicted RBP16.98■□□□□ 0.31
RPRD1A-203ENST00000585879 HAX1O00165 279 aa16.94■□□□□ 0.3
RPRD1A-203ENST00000585879 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
RPRD1A-203ENST00000585879 PRKAR2AP13861 404 aaKnown RBP16.84■□□□□ 0.29
RPRD1A-203ENST00000585879 EVX2Q03828 476 aa16.79■□□□□ 0.28
RPRD1A-203ENST00000585879 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
RPRD1A-203ENST00000585879 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
RPRD1A-203ENST00000585879 PRR29P0C7W0 189 aa16.65■□□□□ 0.26
RPRD1A-203ENST00000585879 C19orf67A6NJJ6 358 aa16.64■□□□□ 0.25
RPRD1A-203ENST00000585879 CHADLQ6NUI6 762 aa16.63■□□□□ 0.25
RPRD1A-203ENST00000585879 FARP1Q9Y4F1 1045 aaPredicted RBP16.4■□□□□ 0.22
RPRD1A-203ENST00000585879 GABBR2O75899 941 aa16.39■□□□□ 0.21
RPRD1A-203ENST00000585879 SPDYE4A6NLX3 237 aa16.37■□□□□ 0.21
RPRD1A-203ENST00000585879 STAG3Q9UJ98 1225 aa16.32■□□□□ 0.2
RPRD1A-203ENST00000585879 CD44P16070 742 aaKnown RBP16.3■□□□□ 0.2
RPRD1A-203ENST00000585879 CREBZFQ9NS37 354 aa16.27■□□□□ 0.2
RPRD1A-203ENST00000585879 CLCN6P51797 869 aa16.12■□□□□ 0.17
RPRD1A-203ENST00000585879 ZNF579Q8NAF0 562 aaKnown RBP16.08■□□□□ 0.16
RPRD1A-203ENST00000585879 POTEIP0CG38 1075 aa16.07■□□□□ 0.16
RPRD1A-203ENST00000585879 PROM2Q8N271 834 aa16.05■□□□□ 0.16
RPRD1A-203ENST00000585879 ZRANB1Q9UGI0 708 aa16.05■□□□□ 0.16
RPRD1A-203ENST00000585879 MNX1P50219 401 aaPredicted RBP16.01■□□□□ 0.15
RPRD1A-203ENST00000585879 LHX8Q68G74 356 aa16■□□□□ 0.15
RPRD1A-203ENST00000585879 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
RPRD1A-203ENST00000585879 DCBLD2Q96PD2 775 aa15.9■□□□□ 0.14
RPRD1A-203ENST00000585879 GALR2O43603 387 aaPredicted RBP15.88■□□□□ 0.13
RPRD1A-203ENST00000585879 PAK3O75914 559 aaPredicted RBP15.88■□□□□ 0.13
RPRD1A-203ENST00000585879 PHF12Q96QT6 1004 aa15.83■□□□□ 0.12
RPRD1A-203ENST00000585879 MS4A3Q96HJ5 214 aa15.64■□□□□ 0.09
RPRD1A-203ENST00000585879 TSPYL2Q9H2G4 693 aaPredicted RBP15.62■□□□□ 0.09
RPRD1A-203ENST00000585879 CCDC61Q9Y6R9 512 aa15.62■□□□□ 0.09
RPRD1A-203ENST00000585879 MIER1Q8N108 512 aa15.6■□□□□ 0.09
RPRD1A-203ENST00000585879 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
RPRD1A-203ENST00000585879 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
RPRD1A-203ENST00000585879 ASTLQ6HA08 431 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms