RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 MTG1Q9BT17 334 aaPredicted RBP24.03■■□□□ 1.44
SRSF1-206ENST00000583741 A0A0D9SFI3 127 aa24.02■■□□□ 1.44
SRSF1-206ENST00000583741 NBPF20Q3BBV1 942 aa24.02■■□□□ 1.44
SRSF1-206ENST00000583741 FAM47CQ5HY64 1035 aa24.02■■□□□ 1.44
SRSF1-206ENST00000583741 RNF207Q6ZRF8 634 aa24.02■■□□□ 1.44
SRSF1-206ENST00000583741 COPS5Q92905 334 aa24.02■■□□□ 1.44
SRSF1-206ENST00000583741 EVI5LQ96CN4 794 aa24.02■■□□□ 1.44
SRSF1-206ENST00000583741 HELLSQ9NRZ9 838 aa24.02■■□□□ 1.44
SRSF1-206ENST00000583741 CA3P07451 260 aa24.01■■□□□ 1.43
SRSF1-206ENST00000583741 EDNRBP24530 442 aa24.01■■□□□ 1.43
SRSF1-206ENST00000583741 RPS6P62753 249 aaKnown RBP24.01■■□□□ 1.43
SRSF1-206ENST00000583741 PPP2R5BQ15173 497 aa24.01■■□□□ 1.43
SRSF1-206ENST00000583741 GPHNQ9NQX3 736 aaPredicted RBP24.01■■□□□ 1.43
SRSF1-206ENST00000583741 TCP11L1Q9NUJ3 509 aa24.01■■□□□ 1.43
SRSF1-206ENST00000583741 RAPGEFL1Q9UHV5 662 aa24.01■■□□□ 1.43
SRSF1-206ENST00000583741 PTPRSQ13332 1948 aa24.01■■□□□ 1.43
SRSF1-206ENST00000583741 RFXAPO00287 272 aa24■■□□□ 1.43
SRSF1-206ENST00000583741 TFF2Q03403 129 aa24■■□□□ 1.43
SRSF1-206ENST00000583741 PDE4DQ08499 809 aa24■■□□□ 1.43
SRSF1-206ENST00000583741 ZNF543Q08ER8 600 aa24■■□□□ 1.43
SRSF1-206ENST00000583741 TMEM67Q5HYA8 995 aa24■■□□□ 1.43
SRSF1-206ENST00000583741 NECAB3Q96P71 396 aaPredicted RBP24■■□□□ 1.43
SRSF1-206ENST00000583741 TRIP12Q14669 1992 aaPredicted RBP24■■□□□ 1.43
SRSF1-206ENST00000583741 A6NJR5 290 aa24■■□□□ 1.43
SRSF1-206ENST00000583741 HAND2P61296 217 aa24■■□□□ 1.43
SRSF1-206ENST00000583741 ZNF589Q86UQ0 364 aaPredicted RBP24■■□□□ 1.43
SRSF1-206ENST00000583741 SCFD2Q8WU76 684 aa24■■□□□ 1.43
SRSF1-206ENST00000583741 CERS4Q9HA82 394 aa24■■□□□ 1.43
SRSF1-206ENST00000583741 WDR19Q8NEZ3 1342 aa23.99■■□□□ 1.43
SRSF1-206ENST00000583741 EPOPA6NHQ4 379 aa23.99■■□□□ 1.43
SRSF1-206ENST00000583741 ARHGEF15O94989 841 aa23.99■■□□□ 1.43
SRSF1-206ENST00000583741 SNHG28P0DPA3 235 aa23.99■■□□□ 1.43
SRSF1-206ENST00000583741 HSPD1P10809 573 aaKnown RBP23.99■■□□□ 1.43
SRSF1-206ENST00000583741 NFRKBQ6P4R8 1299 aa23.99■■□□□ 1.43
SRSF1-206ENST00000583741 IL27Q8NEV9 243 aa23.99■■□□□ 1.43
SRSF1-206ENST00000583741 RAD50Q92878 1312 aa23.98■■□□□ 1.43
SRSF1-206ENST00000583741 PITPNM1O00562 1244 aa23.98■■□□□ 1.43
SRSF1-206ENST00000583741 NKRFO15226 690 aaKnown RBP eCLIP23.98■■□□□ 1.43
SRSF1-206ENST00000583741 ARIH2O95376 493 aa23.98■■□□□ 1.43
SRSF1-206ENST00000583741 IQCF3P0C7M6 154 aa23.98■■□□□ 1.43
SRSF1-206ENST00000583741 BRDTQ58F21 947 aaPredicted RBP23.98■■□□□ 1.43
SRSF1-206ENST00000583741 DNERQ8NFT8 737 aa23.98■■□□□ 1.43
SRSF1-206ENST00000583741 MTCH2Q9Y6C9 303 aa23.98■■□□□ 1.43
SRSF1-206ENST00000583741 ZMYM6O95789 1325 aa23.97■■□□□ 1.43
SRSF1-206ENST00000583741 TXNP10599 105 aaKnown RBP23.97■■□□□ 1.43
SRSF1-206ENST00000583741 ACTN1P12814 892 aa23.97■■□□□ 1.43
SRSF1-206ENST00000583741 BMP1P13497 986 aa23.97■■□□□ 1.43
SRSF1-206ENST00000583741 RFC2P35250 354 aa23.97■■□□□ 1.43
SRSF1-206ENST00000583741 MCMDC2Q4G0Z9 681 aa23.97■■□□□ 1.43
SRSF1-206ENST00000583741 TBC1D10CQ8IV04 446 aa23.97■■□□□ 1.43
SRSF1-206ENST00000583741 SLC9A7Q96T83 725 aa23.97■■□□□ 1.43
SRSF1-206ENST00000583741 TSPYL2Q9H2G4 693 aaPredicted RBP23.97■■□□□ 1.43
SRSF1-206ENST00000583741 TRIM6-TRIM34B2RNG4 842 aa23.96■■□□□ 1.43
SRSF1-206ENST00000583741 SDSP20132 328 aa23.96■■□□□ 1.43
SRSF1-206ENST00000583741 KCNQ1P51787 676 aa23.96■■□□□ 1.43
SRSF1-206ENST00000583741 USH1GQ495M9 461 aa23.96■■□□□ 1.43
SRSF1-206ENST00000583741 CPVLQ9H3G5 476 aa23.96■■□□□ 1.43
SRSF1-206ENST00000583741 PNMA2Q9UL42 364 aa23.96■■□□□ 1.43
SRSF1-206ENST00000583741 COL4A4P53420 1690 aaPredicted RBP23.96■■□□□ 1.43
SRSF1-206ENST00000583741 KIAA1217Q5T5P2 1943 aa23.95■■□□□ 1.43
SRSF1-206ENST00000583741 KPNA6O60684 536 aa23.95■■□□□ 1.42
SRSF1-206ENST00000583741 GOLGA8HP0CJ92 632 aa23.95■■□□□ 1.42
SRSF1-206ENST00000583741 POU3F3P20264 500 aaPredicted RBP23.95■■□□□ 1.42
SRSF1-206ENST00000583741 NMIQ13287 307 aaPredicted RBP23.95■■□□□ 1.42
SRSF1-206ENST00000583741 KRT40Q6A162 431 aa23.95■■□□□ 1.42
SRSF1-206ENST00000583741 MPHOSPH6Q99547 160 aaKnown RBP23.95■■□□□ 1.42
SRSF1-206ENST00000583741 LAMA4Q16363 1823 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 CHMP4BP1P59074 171 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 TAP1Q03518 808 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 PTPN11Q06124 597 aaPredicted RBP23.94■■□□□ 1.42
SRSF1-206ENST00000583741 SKIV2LQ15477 1246 aaKnown RBP23.94■■□□□ 1.42
SRSF1-206ENST00000583741 C8orf34Q49A92 452 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 RETREG2Q8NC44 543 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 TTC14Q96N46 770 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 CTAGE1Q96RT6 745 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 FTOQ9C0B1 505 aaKnown RBP eCLIP23.94■■□□□ 1.42
SRSF1-206ENST00000583741 NEDD4P46934 1319 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 MYH6P13533 1939 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 MFSD6Q6ZSS7 791 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 SPRED2Q7Z698 418 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 HERC6Q8IVU3 1022 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 PHOSPHO2Q8TCD6 241 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 RILPL2Q969X0 211 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 ZKSCAN3Q9BRR0 538 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 NOD1Q9Y239 953 aa23.94■■□□□ 1.42
SRSF1-206ENST00000583741 CCDC171Q6TFL3 1326 aa23.93■■□□□ 1.42
SRSF1-206ENST00000583741 BFSP2Q13515 415 aa23.93■■□□□ 1.42
SRSF1-206ENST00000583741 CCDC62Q6P9F0 684 aa23.93■■□□□ 1.42
SRSF1-206ENST00000583741 ARNTL2Q8WYA1 636 aa23.93■■□□□ 1.42
SRSF1-206ENST00000583741 TBC1D5Q92609 795 aa23.93■■□□□ 1.42
SRSF1-206ENST00000583741 UBA5Q9GZZ9 404 aa23.93■■□□□ 1.42
SRSF1-206ENST00000583741 GTPBP6O43824 516 aaPredicted RBP23.92■■□□□ 1.42
SRSF1-206ENST00000583741 PTGISQ16647 500 aa23.92■■□□□ 1.42
SRSF1-206ENST00000583741 RGS22Q8NE09 1264 aa23.92■■□□□ 1.42
SRSF1-206ENST00000583741 AFG1LQ8WV93 481 aa23.92■■□□□ 1.42
SRSF1-206ENST00000583741 BRWD1Q9NSI6 2320 aa23.91■■□□□ 1.42
SRSF1-206ENST00000583741 RBAK-RBAKDNI3L0D1 243 aa23.91■■□□□ 1.42
SRSF1-206ENST00000583741 CDC45O75419 566 aa23.91■■□□□ 1.42
SRSF1-206ENST00000583741 MMP3P08254 477 aa23.91■■□□□ 1.42
SRSF1-206ENST00000583741 GPNMBQ14956 572 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms