RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 KPNA6O60684 536 aa23.32■■□□□ 1.32
SMG8-204ENST00000580498 TXNP10599 105 aaKnown RBP23.32■■□□□ 1.32
SMG8-204ENST00000580498 BADQ92934 168 aa23.32■■□□□ 1.32
SMG8-204ENST00000580498 LY9Q9HBG7 655 aa23.32■■□□□ 1.32
SMG8-204ENST00000580498 TAF6LQ9Y6J9 622 aa23.32■■□□□ 1.32
SMG8-204ENST00000580498 GCOM1H8Y6P7 765 aaPredicted RBP23.31■■□□□ 1.32
SMG8-204ENST00000580498 KIAA0355O15063 1070 aa23.31■■□□□ 1.32
SMG8-204ENST00000580498 POLR2MP0CAP2 368 aa23.31■■□□□ 1.32
SMG8-204ENST00000580498 SMARCA1P28370 1054 aa23.31■■□□□ 1.32
SMG8-204ENST00000580498 LIFRP42702 1097 aa23.31■■□□□ 1.32
SMG8-204ENST00000580498 ANTXR2P58335 489 aa23.31■■□□□ 1.32
SMG8-204ENST00000580498 CXCL17Q6UXB2 119 aa23.31■■□□□ 1.32
SMG8-204ENST00000580498 CUL5Q93034 780 aa23.31■■□□□ 1.32
SMG8-204ENST00000580498 PIGSQ96S52 555 aa23.31■■□□□ 1.32
SMG8-204ENST00000580498 SH2B2O14492 632 aaPredicted RBP23.3■■□□□ 1.32
SMG8-204ENST00000580498 HMGB1P09429 215 aaKnown RBP23.3■■□□□ 1.32
SMG8-204ENST00000580498 FGD1P98174 961 aa23.3■■□□□ 1.32
SMG8-204ENST00000580498 ITGA7Q13683 1181 aa23.3■■□□□ 1.32
SMG8-204ENST00000580498 GPR153Q6NV75 609 aa23.3■■□□□ 1.32
SMG8-204ENST00000580498 NEK1Q96PY6 1258 aa23.3■■□□□ 1.32
SMG8-204ENST00000580498 TAAR1Q96RJ0 339 aa23.3■■□□□ 1.32
SMG8-204ENST00000580498 SPZ1Q9BXG8 430 aa23.3■■□□□ 1.32
SMG8-204ENST00000580498 DDX49Q9Y6V7 483 aaKnown RBP23.3■■□□□ 1.32
SMG8-204ENST00000580498 LTBP2Q14767 1821 aa23.29■■□□□ 1.32
SMG8-204ENST00000580498 EIF3JO75822 258 aaKnown RBP23.29■■□□□ 1.32
SMG8-204ENST00000580498 EIF2AK2P19525 551 aaKnown RBP23.29■■□□□ 1.32
SMG8-204ENST00000580498 HSD17B4P51659 736 aa23.29■■□□□ 1.32
SMG8-204ENST00000580498 KCNV1Q6PIU1 500 aa23.29■■□□□ 1.32
SMG8-204ENST00000580498 SEPT14Q6ZU15 432 aa23.29■■□□□ 1.32
SMG8-204ENST00000580498 TRIM43BA6NCK2 446 aa23.28■■□□□ 1.32
SMG8-204ENST00000580498 REC8O95072 547 aa23.28■■□□□ 1.32
SMG8-204ENST00000580498 MYL3P08590 195 aa23.28■■□□□ 1.32
SMG8-204ENST00000580498 FPGSQ05932 587 aa23.28■■□□□ 1.32
SMG8-204ENST00000580498 FAAP100Q0VG06 881 aa23.28■■□□□ 1.32
SMG8-204ENST00000580498 SH3RF1Q7Z6J0 888 aa23.28■■□□□ 1.32
SMG8-204ENST00000580498 TRIM43Q96BQ3 446 aaPredicted RBP23.28■■□□□ 1.32
SMG8-204ENST00000580498 MTG1Q9BT17 334 aaPredicted RBP23.28■■□□□ 1.32
SMG8-204ENST00000580498 SENP2Q9HC62 589 aa23.28■■□□□ 1.32
SMG8-204ENST00000580498 PXMP2Q9NR77 195 aa23.28■■□□□ 1.32
SMG8-204ENST00000580498 CTAGE5O15320 804 aa23.27■■□□□ 1.32
SMG8-204ENST00000580498 TIMP1P01033 207 aa23.27■■□□□ 1.32
SMG8-204ENST00000580498 GH1P01241 217 aa23.27■■□□□ 1.32
SMG8-204ENST00000580498 NR3C2P08235 984 aa23.27■■□□□ 1.32
SMG8-204ENST00000580498 CDK7P50613 346 aa23.27■■□□□ 1.32
SMG8-204ENST00000580498 IRX5P78411 483 aaPredicted RBP23.27■■□□□ 1.32
SMG8-204ENST00000580498 TMEM199Q8N511 208 aa23.27■■□□□ 1.32
SMG8-204ENST00000580498 TBC1D5Q92609 795 aa23.27■■□□□ 1.32
SMG8-204ENST00000580498 MRVI1Q9Y6F6 885 aa23.27■■□□□ 1.32
SMG8-204ENST00000580498 BAZ2BQ9UIF8 2168 aaKnown RBP23.27■■□□□ 1.32
SMG8-204ENST00000580498 CENPBP07199 599 aaPredicted RBP23.26■■□□□ 1.31
SMG8-204ENST00000580498 SUPT20HL2P0C7V6 817 aa23.26■■□□□ 1.31
SMG8-204ENST00000580498 GHRHRQ02643 423 aa23.26■■□□□ 1.31
SMG8-204ENST00000580498 PPIGQ13427 754 aaKnown RBP eCLIP23.26■■□□□ 1.31
SMG8-204ENST00000580498 SKAP1Q86WV1 359 aa23.26■■□□□ 1.31
SMG8-204ENST00000580498 PIBF1Q8WXW3 757 aa23.26■■□□□ 1.31
SMG8-204ENST00000580498 MYL10Q9BUA6 226 aa23.26■■□□□ 1.31
SMG8-204ENST00000580498 RBM28Q9NW13 759 aaKnown RBP23.26■■□□□ 1.31
SMG8-204ENST00000580498 DNAH12Q6ZR08 3092 aa23.26■■□□□ 1.31
SMG8-204ENST00000580498 MYCLP12524 364 aaPredicted RBP23.25■■□□□ 1.31
SMG8-204ENST00000580498 CCND2P30279 289 aa23.25■■□□□ 1.31
SMG8-204ENST00000580498 DHX32Q7L7V1 743 aaKnown RBP23.25■■□□□ 1.31
SMG8-204ENST00000580498 FAM126BQ8IXS8 530 aa23.25■■□□□ 1.31
SMG8-204ENST00000580498 SMARCC2Q8TAQ2 1214 aa23.25■■□□□ 1.31
SMG8-204ENST00000580498 COL20A1Q9P218 1284 aa23.25■■□□□ 1.31
SMG8-204ENST00000580498 CYTH3O43739 400 aa23.24■■□□□ 1.31
SMG8-204ENST00000580498 PPP1R11O60927 126 aaPredicted RBP23.24■■□□□ 1.31
SMG8-204ENST00000580498 HOXA13P31271 388 aaPredicted RBP23.24■■□□□ 1.31
SMG8-204ENST00000580498 GNPTABQ3T906 1256 aa23.24■■□□□ 1.31
SMG8-204ENST00000580498 ERICH6BQ5W0A0 696 aa23.24■■□□□ 1.31
SMG8-204ENST00000580498 SGMS1Q86VZ5 419 aa23.24■■□□□ 1.31
SMG8-204ENST00000580498 FCHSD1Q86WN1 690 aa23.24■■□□□ 1.31
SMG8-204ENST00000580498 MICU3Q86XE3 530 aa23.24■■□□□ 1.31
SMG8-204ENST00000580498 TBX21Q9UL17 535 aa23.24■■□□□ 1.31
SMG8-204ENST00000580498 KIAA1217Q5T5P2 1943 aa23.23■■□□□ 1.31
SMG8-204ENST00000580498 STAM2O75886 525 aa23.23■■□□□ 1.31
SMG8-204ENST00000580498 PURAQ00577 322 aaKnown RBP23.23■■□□□ 1.31
SMG8-204ENST00000580498 TSGA10IPQ3SY00 556 aa23.23■■□□□ 1.31
SMG8-204ENST00000580498 FAM47CQ5HY64 1035 aa23.23■■□□□ 1.31
SMG8-204ENST00000580498 MFSD5Q6N075 450 aa23.23■■□□□ 1.31
SMG8-204ENST00000580498 FANCBQ8NB91 859 aa23.23■■□□□ 1.31
SMG8-204ENST00000580498 SLC43A3Q8NBI5 491 aa23.23■■□□□ 1.31
SMG8-204ENST00000580498 LRCH3Q96II8 777 aa23.23■■□□□ 1.31
SMG8-204ENST00000580498 PDCD2LQ9BRP1 358 aa23.23■■□□□ 1.31
SMG8-204ENST00000580498 A6NJR5 290 aa23.22■■□□□ 1.31
SMG8-204ENST00000580498 CASTP20810 708 aaKnown RBP23.22■■□□□ 1.31
SMG8-204ENST00000580498 LAMC2Q13753 1193 aa23.22■■□□□ 1.31
SMG8-204ENST00000580498 RNPC3Q96LT9 517 aaKnown RBP23.22■■□□□ 1.31
SMG8-204ENST00000580498 LRRC2Q9BYS8 371 aa23.22■■□□□ 1.31
SMG8-204ENST00000580498 MTIF3Q9H2K0 278 aaKnown RBP23.22■■□□□ 1.31
SMG8-204ENST00000580498 HIPK3Q9H422 1215 aa23.22■■□□□ 1.31
SMG8-204ENST00000580498 SOX1O00570 391 aaPredicted RBP23.21■■□□□ 1.31
SMG8-204ENST00000580498 ZBTB43O43298 467 aa23.21■■□□□ 1.31
SMG8-204ENST00000580498 TGFB3P10600 412 aa23.21■■□□□ 1.31
SMG8-204ENST00000580498 PSMC6P62333 389 aa23.21■■□□□ 1.31
SMG8-204ENST00000580498 PTPN11Q06124 597 aaPredicted RBP23.21■■□□□ 1.31
SMG8-204ENST00000580498 PGM5Q15124 567 aa23.21■■□□□ 1.31
SMG8-204ENST00000580498 SHHQ15465 462 aa23.21■■□□□ 1.31
SMG8-204ENST00000580498 DGKDQ16760 1214 aa23.21■■□□□ 1.31
SMG8-204ENST00000580498 LY6KQ17RY6 165 aa23.21■■□□□ 1.31
SMG8-204ENST00000580498 CCDC62Q6P9F0 684 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms