RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 GRB10Q13322 594 aa24.45■■□□□ 1.5
SPNS3-203ENST00000575185 NFRKBQ6P4R8 1299 aa24.45■■□□□ 1.5
SPNS3-203ENST00000575185 TMCO2Q7Z6W1 182 aaPredicted RBP24.45■■□□□ 1.5
SPNS3-203ENST00000575185 BRWD1Q9NSI6 2320 aa24.45■■□□□ 1.5
SPNS3-203ENST00000575185 PDE4DQ08499 809 aa24.44■■□□□ 1.5
SPNS3-203ENST00000575185 RNF207Q6ZRF8 634 aa24.44■■□□□ 1.5
SPNS3-203ENST00000575185 RETREG2Q8NC44 543 aa24.44■■□□□ 1.5
SPNS3-203ENST00000575185 PHOSPHO2Q8TCD6 241 aa24.44■■□□□ 1.5
SPNS3-203ENST00000575185 TMEM47Q9BQJ4 181 aa24.44■■□□□ 1.5
SPNS3-203ENST00000575185 ANAPC4Q9UJX5 808 aa24.44■■□□□ 1.5
SPNS3-203ENST00000575185 RAD50Q92878 1312 aa24.43■■□□□ 1.5
SPNS3-203ENST00000575185 LOC102724159A0A0B4J2E5 919 aa24.43■■□□□ 1.5
SPNS3-203ENST00000575185 LCHNA4D1U4 455 aa24.43■■□□□ 1.5
SPNS3-203ENST00000575185 A6NJR5 290 aa24.43■■□□□ 1.5
SPNS3-203ENST00000575185 TLL1O43897 1013 aa24.43■■□□□ 1.5
SPNS3-203ENST00000575185 ORC4O43929 436 aa24.43■■□□□ 1.5
SPNS3-203ENST00000575185 LPXNO60711 386 aa24.43■■□□□ 1.5
SPNS3-203ENST00000575185 ARIH2O95376 493 aa24.43■■□□□ 1.5
SPNS3-203ENST00000575185 EDNRBP24530 442 aa24.43■■□□□ 1.5
SPNS3-203ENST00000575185 RPS6P62753 249 aaKnown RBP24.43■■□□□ 1.5
SPNS3-203ENST00000575185 PWP2Q15269 919 aaKnown RBP24.43■■□□□ 1.5
SPNS3-203ENST00000575185 KHSRPQ92945 711 aaKnown RBP eCLIP24.43■■□□□ 1.5
SPNS3-203ENST00000575185 LRFN3Q9BTN0 628 aa24.43■■□□□ 1.5
SPNS3-203ENST00000575185 COG5Q9UP83 839 aa24.43■■□□□ 1.5
SPNS3-203ENST00000575185 KIAA1217Q5T5P2 1943 aa24.42■■□□□ 1.5
SPNS3-203ENST00000575185 AAMPQ13685 434 aa24.42■■□□□ 1.5
SPNS3-203ENST00000575185 RRP12Q5JTH9 1297 aaKnown RBP24.42■■□□□ 1.5
SPNS3-203ENST00000575185 SCFD2Q8WU76 684 aa24.42■■□□□ 1.5
SPNS3-203ENST00000575185 TOMM22Q9NS69 142 aa24.42■■□□□ 1.5
SPNS3-203ENST00000575185 NOD1Q9Y239 953 aa24.42■■□□□ 1.5
SPNS3-203ENST00000575185 NKRFO15226 690 aaKnown RBP eCLIP24.41■■□□□ 1.5
SPNS3-203ENST00000575185 TXNP10599 105 aaKnown RBP24.41■■□□□ 1.5
SPNS3-203ENST00000575185 TOP1P11387 765 aaKnown RBP24.41■■□□□ 1.5
SPNS3-203ENST00000575185 BFSP2Q13515 415 aa24.41■■□□□ 1.5
SPNS3-203ENST00000575185 BRDTQ58F21 947 aaPredicted RBP24.41■■□□□ 1.5
SPNS3-203ENST00000575185 GDPD5Q8WTR4 605 aa24.41■■□□□ 1.5
SPNS3-203ENST00000575185 HLA-CQ95604 372 aa24.41■■□□□ 1.5
SPNS3-203ENST00000575185 CTAGE1Q96RT6 745 aa24.41■■□□□ 1.5
SPNS3-203ENST00000575185 SIP14410 1827 aa24.4■■□□□ 1.5
SPNS3-203ENST00000575185 FGRP09769 529 aa24.4■■□□□ 1.5
SPNS3-203ENST00000575185 PDHBP11177 359 aa24.4■■□□□ 1.5
SPNS3-203ENST00000575185 PTPN11Q06124 597 aaPredicted RBP24.4■■□□□ 1.5
SPNS3-203ENST00000575185 GPNMBQ14956 572 aa24.4■■□□□ 1.5
SPNS3-203ENST00000575185 KIF28PB7ZC32 967 aa24.39■■□□□ 1.49
SPNS3-203ENST00000575185 BAIAP3O94812 1187 aa24.39■■□□□ 1.49
SPNS3-203ENST00000575185 MX1P20591 662 aa24.39■■□□□ 1.49
SPNS3-203ENST00000575185 HOXD11P31277 338 aaPredicted RBP24.39■■□□□ 1.49
SPNS3-203ENST00000575185 WDR5P61964 334 aaKnown RBP24.39■■□□□ 1.49
SPNS3-203ENST00000575185 DEFB103AP81534 67 aa24.39■■□□□ 1.49
SPNS3-203ENST00000575185 PTGISQ16647 500 aa24.39■■□□□ 1.49
SPNS3-203ENST00000575185 TCTN1Q2MV58 587 aa24.39■■□□□ 1.49
SPNS3-203ENST00000575185 GDF6Q6KF10 455 aaPredicted RBP24.39■■□□□ 1.49
SPNS3-203ENST00000575185 KPNA6O60684 536 aa24.38■■□□□ 1.49
SPNS3-203ENST00000575185 KCNJ6P48051 423 aa24.38■■□□□ 1.49
SPNS3-203ENST00000575185 USH1GQ495M9 461 aa24.38■■□□□ 1.49
SPNS3-203ENST00000575185 AFG1LQ8WV93 481 aa24.38■■□□□ 1.49
SPNS3-203ENST00000575185 DHX38Q92620 1227 aaKnown RBP24.38■■□□□ 1.49
SPNS3-203ENST00000575185 SALL3Q9BXA9 1300 aa24.37■■□□□ 1.49
SPNS3-203ENST00000575185 MYH6P13533 1939 aa24.37■■□□□ 1.49
SPNS3-203ENST00000575185 FAM86C2PA6NEL3 165 aa24.37■■□□□ 1.49
SPNS3-203ENST00000575185 ZNF543Q08ER8 600 aa24.37■■□□□ 1.49
SPNS3-203ENST00000575185 DNERQ8NFT8 737 aa24.37■■□□□ 1.49
SPNS3-203ENST00000575185 CRBNQ96SW2 442 aa24.37■■□□□ 1.49
SPNS3-203ENST00000575185 CPVLQ9H3G5 476 aa24.37■■□□□ 1.49
SPNS3-203ENST00000575185 C11orf16Q9NQ32 467 aa24.37■■□□□ 1.49
SPNS3-203ENST00000575185 MTUS1Q9ULD2 1270 aa24.37■■□□□ 1.49
SPNS3-203ENST00000575185 PCDHB15Q9Y5E8 787 aa24.37■■□□□ 1.49
SPNS3-203ENST00000575185 WDR19Q8NEZ3 1342 aa24.36■■□□□ 1.49
SPNS3-203ENST00000575185 MMP3P08254 477 aa24.36■■□□□ 1.49
SPNS3-203ENST00000575185 MPHOSPH6Q99547 160 aaKnown RBP24.36■■□□□ 1.49
SPNS3-203ENST00000575185 CD320Q9NPF0 282 aa24.36■■□□□ 1.49
SPNS3-203ENST00000575185 HCN4Q9Y3Q4 1203 aa24.36■■□□□ 1.49
SPNS3-203ENST00000575185 FGAP02671 866 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 HAND2P61296 217 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 ALX1Q15699 326 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 LY6KQ17RY6 165 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 TMEM31Q5JXX7 168 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 CCDC62Q6P9F0 684 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 LRRC8DQ7L1W4 858 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 CAGE1Q8TC20 777 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 AFAP1L1Q8TED9 768 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 KAT2BQ92831 832 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 FAM227BQ96M60 508 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 TCP11L1Q9NUJ3 509 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 MYH7BA7E2Y1 1941 aa24.35■■□□□ 1.49
SPNS3-203ENST00000575185 A0A0D9SFI3 127 aa24.34■■□□□ 1.49
SPNS3-203ENST00000575185 NBNO60934 754 aa24.34■■□□□ 1.49
SPNS3-203ENST00000575185 GOLGA8HP0CJ92 632 aa24.34■■□□□ 1.49
SPNS3-203ENST00000575185 ARHGAP1Q07960 439 aa24.34■■□□□ 1.49
SPNS3-203ENST00000575185 CHST3Q7LGC8 479 aa24.34■■□□□ 1.49
SPNS3-203ENST00000575185 CCDC155Q8N6L0 562 aa24.34■■□□□ 1.49
SPNS3-203ENST00000575185 TBC1D5Q92609 795 aa24.34■■□□□ 1.49
SPNS3-203ENST00000575185 ZBED2Q9BTP6 218 aa24.34■■□□□ 1.49
SPNS3-203ENST00000575185 SNHG28P0DPA3 235 aa24.33■■□□□ 1.49
SPNS3-203ENST00000575185 SELPP16109 830 aa24.33■■□□□ 1.49
SPNS3-203ENST00000575185 SEPT14Q6ZU15 432 aa24.33■■□□□ 1.49
SPNS3-203ENST00000575185 SESTD1Q86VW0 696 aa24.33■■□□□ 1.49
SPNS3-203ENST00000575185 COL20A1Q9P218 1284 aa24.33■■□□□ 1.49
SPNS3-203ENST00000575185 LAMA4Q16363 1823 aa24.33■■□□□ 1.48
SPNS3-203ENST00000575185 CNKSR3Q6P9H4 555 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms