RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ERGIC2Q96RQ1 377 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 MMTAG2Q9BU76 263 aaKnown RBP15.84■□□□□ 0.13
CDH1-209ENST00000566510 TSGA10Q9BZW7 698 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 NDST4Q9H3R1 872 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 PCDHA13Q9Y5I0 950 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 CAPN6Q9Y6Q1 641 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 COL16A1Q07092 1604 aaPredicted RBP15.84■□□□□ 0.13
CDH1-209ENST00000566510 ANO9A1A5B4 782 aa15.83■□□□□ 0.13
CDH1-209ENST00000566510 TARSL2A2RTX5 802 aaKnown RBP15.83■□□□□ 0.13
CDH1-209ENST00000566510 GGCXP38435 758 aa15.83■□□□□ 0.13
CDH1-209ENST00000566510 CALCRLQ16602 461 aa15.83■□□□□ 0.13
CDH1-209ENST00000566510 VWA3BQ502W6 1294 aa15.83■□□□□ 0.13
CDH1-209ENST00000566510 SELENOOQ9BVL4 669 aa15.83■□□□□ 0.13
CDH1-209ENST00000566510 TRIM34Q9BYJ4 488 aa15.83■□□□□ 0.13
CDH1-209ENST00000566510 VIPAS39Q9H9C1 493 aa15.83■□□□□ 0.13
CDH1-209ENST00000566510 ARHGAP20Q9P2F6 1191 aa15.83■□□□□ 0.13
CDH1-209ENST00000566510 RSPH14Q9UHP6 348 aa15.83■□□□□ 0.13
CDH1-209ENST00000566510 FRMPD2Q68DX3 1309 aaPredicted RBP15.83■□□□□ 0.13
CDH1-209ENST00000566510 RREB1Q92766 1687 aa15.83■□□□□ 0.12
CDH1-209ENST00000566510 EIF4A3P38919 411 aaKnown RBP15.83■□□□□ 0.12
CDH1-209ENST00000566510 KIF11P52732 1056 aa15.83■□□□□ 0.12
CDH1-209ENST00000566510 SEMA3FQ13275 785 aa15.83■□□□□ 0.12
CDH1-209ENST00000566510 NFIXQ14938 502 aa15.83■□□□□ 0.12
CDH1-209ENST00000566510 TMED8Q6PL24 325 aaPredicted RBP15.83■□□□□ 0.12
CDH1-209ENST00000566510 ZNF662Q6ZS27 426 aa15.83■□□□□ 0.12
CDH1-209ENST00000566510 PTF1AQ7RTS3 328 aa15.83■□□□□ 0.12
CDH1-209ENST00000566510 ZSCAN29Q8IWY8 852 aaPredicted RBP15.83■□□□□ 0.12
CDH1-209ENST00000566510 TRIM58Q8NG06 486 aa15.83■□□□□ 0.12
CDH1-209ENST00000566510 SPZ1Q9BXG8 430 aa15.83■□□□□ 0.12
CDH1-209ENST00000566510 NARFQ9UHQ1 456 aa15.83■□□□□ 0.12
CDH1-209ENST00000566510 RRP15Q9Y3B9 282 aaKnown RBP15.83■□□□□ 0.12
CDH1-209ENST00000566510 JRKLQ9Y4A0 524 aa15.83■□□□□ 0.12
CDH1-209ENST00000566510 MYMKA6NI61 221 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 PPP1R2P41236 205 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 BTDP43251 543 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 LRRC41Q15345 812 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 CCDC181Q5TID7 509 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 CCNI2Q6ZMN8 369 aaPredicted RBP15.82■□□□□ 0.12
CDH1-209ENST00000566510 TEX11Q8IYF3 940 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 BBXQ8WY36 941 aaPredicted RBP15.82■□□□□ 0.12
CDH1-209ENST00000566510 CEP95Q96GE4 821 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 PLAGL2Q9UPG8 496 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 A0A1W2PQJ5 194 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 POTEMA6NI47 508 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 LDHCP07864 332 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 SLC7A5Q01650 507 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 EZH2Q15910 746 aaKnown RBP15.82■□□□□ 0.12
CDH1-209ENST00000566510 FAM98CQ17RN3 349 aaKnown RBP15.82■□□□□ 0.12
CDH1-209ENST00000566510 CACNA2D4Q7Z3S7 1137 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 LARP4BQ92615 738 aaKnown RBP15.82■□□□□ 0.12
CDH1-209ENST00000566510 COA7Q96BR5 231 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 SMARCAL1Q9NZC9 954 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 SNX12Q9UMY4 172 aa15.82■□□□□ 0.12
CDH1-209ENST00000566510 LRRC53A6NM62 1247 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 USP17L5A8MUK1 530 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 TM4SF1P30408 202 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 EIF6P56537 245 aaKnown RBP15.81■□□□□ 0.12
CDH1-209ENST00000566510 CENPPQ6IPU0 288 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 NFRKBQ6P4R8 1299 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 SRLQ86TD4 932 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 HDAC7Q8WUI4 952 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 UIMC1Q96RL1 719 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 TSPYL1Q9H0U9 437 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 DNA2P51530 1060 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 GRB10Q13322 594 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 TMEM266Q2M3C6 531 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 FIGNQ5HY92 759 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 ZNF804AQ7Z570 1209 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 CCDC155Q8N6L0 562 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 ALS2CR12Q96Q35 445 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 LRRC1Q9BTT6 524 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 RASSF4Q9H2L5 321 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 GOLGA6BA6NDN3 693 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 MARCH6O60337 910 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 TDP2O95551 362 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 AARSP49588 968 aaKnown RBP eCLIP15.81■□□□□ 0.12
CDH1-209ENST00000566510 TDRD12Q587J7 1177 aaKnown RBP15.81■□□□□ 0.12
CDH1-209ENST00000566510 LRRC31Q6UY01 552 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 CREG2Q8IUH2 290 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 PURBQ96QR8 312 aaKnown RBP15.81■□□□□ 0.12
CDH1-209ENST00000566510 SH2D4AQ9H788 454 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 BLOC1S4Q9NUP1 217 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 EHD2Q9NZN4 543 aa15.81■□□□□ 0.12
CDH1-209ENST00000566510 ROBO3Q96MS0 1386 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 ANKRD65E5RJM6 399 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 NCK2O43639 380 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 SLC37A4O43826 429 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 SSBP05455 408 aaKnown RBP eCLIP15.8■□□□□ 0.12
CDH1-209ENST00000566510 MAGEA1P43355 309 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 CDK17Q00537 523 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 MAN2A1Q16706 1144 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 SPATA31A5Q5VU36 1347 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 SND1Q7KZF4 910 aaKnown RBP eCLIP15.8■□□□□ 0.128e-7■■■■□ 21
CDH1-209ENST00000566510 CCDC84Q86UT8 332 aaPredicted RBP15.8■□□□□ 0.12
CDH1-209ENST00000566510 SPATA31A7Q8IWB4 1347 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 SNX29Q8TEQ0 813 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 NLRC4Q9NPP4 1024 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 MAST2Q6P0Q8 1798 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 VGLL3A8MV65 326 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 BUB1O43683 1085 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms