RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ERICH6BQ5W0A0 696 aa19.39■□□□□ 0.69
USB1-211ENST00000565662 STOX1Q6ZVD7 989 aa19.39■□□□□ 0.69
USB1-211ENST00000565662 EEPD1Q7L9B9 569 aa19.39■□□□□ 0.69
USB1-211ENST00000565662 ZNF654Q8IZM8 581 aa19.39■□□□□ 0.69
USB1-211ENST00000565662 STAG2Q8N3U4 1231 aa19.39■□□□□ 0.69
USB1-211ENST00000565662 OR6J1Q8NGC5 347 aa19.39■□□□□ 0.69
USB1-211ENST00000565662 SYTL5Q8TDW5 730 aaPredicted RBP19.39■□□□□ 0.69
USB1-211ENST00000565662 LY9Q9HBG7 655 aa19.39■□□□□ 0.69
USB1-211ENST00000565662 VAT1LQ9HCJ6 419 aa19.39■□□□□ 0.69
USB1-211ENST00000565662 MYADML2A6NDP7 307 aa19.38■□□□□ 0.69
USB1-211ENST00000565662 EIF3JO75822 258 aaKnown RBP19.38■□□□□ 0.69
USB1-211ENST00000565662 CFBP00751 764 aa19.38■□□□□ 0.69
USB1-211ENST00000565662 SUPT20HL2P0C7V6 817 aa19.38■□□□□ 0.69
USB1-211ENST00000565662 SLC43A3Q8NBI5 491 aa19.38■□□□□ 0.69
USB1-211ENST00000565662 RRP36Q96EU6 259 aaKnown RBP19.38■□□□□ 0.69
USB1-211ENST00000565662 DNAH12Q6ZR08 3092 aa19.38■□□□□ 0.69
USB1-211ENST00000565662 GCOM1H8Y6P7 765 aaPredicted RBP19.37■□□□□ 0.69
USB1-211ENST00000565662 CTAGE5O15320 804 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 POLR2MP0CAP2 368 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 TXNP10599 105 aaKnown RBP19.37■□□□□ 0.69
USB1-211ENST00000565662 RCAN1P53805 252 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 ANTXR2P58335 489 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 FPGSQ05932 587 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 PTPN11Q06124 597 aaPredicted RBP19.37■□□□□ 0.69
USB1-211ENST00000565662 FAAP100Q0VG06 881 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 PPIGQ13427 754 aaKnown RBP eCLIP19.37■□□□□ 0.693e-8■□□□□ 8.7
USB1-211ENST00000565662 TSGA10IPQ3SY00 556 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 SGMS1Q86VZ5 419 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 HOMER1Q86YM7 354 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 CUL5Q93034 780 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 CPVLQ9H3G5 476 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 SLC12A7Q9Y666 1083 aa19.37■□□□□ 0.69
USB1-211ENST00000565662 SH2B2O14492 632 aaPredicted RBP19.36■□□□□ 0.69
USB1-211ENST00000565662 REC8O95072 547 aa19.36■□□□□ 0.69
USB1-211ENST00000565662 TIMP1P01033 207 aa19.36■□□□□ 0.69
USB1-211ENST00000565662 ITGA7Q13683 1181 aa19.36■□□□□ 0.69
USB1-211ENST00000565662 FAM126BQ8IXS8 530 aa19.36■□□□□ 0.69
USB1-211ENST00000565662 TMEM199Q8N511 208 aa19.36■□□□□ 0.69
USB1-211ENST00000565662 BADQ92934 168 aa19.36■□□□□ 0.69
USB1-211ENST00000565662 MTG1Q9BT17 334 aaPredicted RBP19.36■□□□□ 0.69
USB1-211ENST00000565662 MTIF3Q9H2K0 278 aaKnown RBP19.36■□□□□ 0.69
USB1-211ENST00000565662 PXMP2Q9NR77 195 aa19.36■□□□□ 0.69
USB1-211ENST00000565662 PDGFCQ9NRA1 345 aa19.36■□□□□ 0.69
USB1-211ENST00000565662 RBM28Q9NW13 759 aaKnown RBP19.36■□□□□ 0.69
USB1-211ENST00000565662 TBX21Q9UL17 535 aa19.36■□□□□ 0.69
USB1-211ENST00000565662 TRIM43BA6NCK2 446 aa19.35■□□□□ 0.69
USB1-211ENST00000565662 A6NJR5 290 aa19.35■□□□□ 0.69
USB1-211ENST00000565662 GH1P01241 217 aa19.35■□□□□ 0.69
USB1-211ENST00000565662 TGFB3P10600 412 aa19.35■□□□□ 0.69
USB1-211ENST00000565662 BEX3Q00994 111 aa19.35■□□□□ 0.69
USB1-211ENST00000565662 GNPTABQ3T906 1256 aa19.35■□□□□ 0.69
USB1-211ENST00000565662 FAM109BQ6ICB4 259 aaPredicted RBP19.35■□□□□ 0.69
USB1-211ENST00000565662 MFSD5Q6N075 450 aa19.35■□□□□ 0.69
USB1-211ENST00000565662 CXCL17Q6UXB2 119 aa19.35■□□□□ 0.69
USB1-211ENST00000565662 EMID1Q96A84 441 aaPredicted RBP19.35■□□□□ 0.69
USB1-211ENST00000565662 TRIM43Q96BQ3 446 aaPredicted RBP19.35■□□□□ 0.69
USB1-211ENST00000565662 NEK1Q96PY6 1258 aa19.35■□□□□ 0.69
USB1-211ENST00000565662 KATNAL1Q9BW62 490 aa19.35■□□□□ 0.69
USB1-211ENST00000565662 hCG_1984214I3L0E3 225 aa19.34■□□□□ 0.69
USB1-211ENST00000565662 EIF5BO60841 1220 aaKnown RBP19.34■□□□□ 0.69
USB1-211ENST00000565662 NR3C2P08235 984 aa19.34■□□□□ 0.69
USB1-211ENST00000565662 CCND2P30279 289 aa19.34■□□□□ 0.69
USB1-211ENST00000565662 PURAQ00577 322 aaKnown RBP19.34■□□□□ 0.69
USB1-211ENST00000565662 XRRA1Q6P2D8 792 aa19.34■□□□□ 0.69
USB1-211ENST00000565662 NFRKBQ6P4R8 1299 aa19.34■□□□□ 0.69
USB1-211ENST00000565662 PSRC1Q6PGN9 363 aaPredicted RBP19.34■□□□□ 0.69
USB1-211ENST00000565662 ZNF713Q8N859 430 aaPredicted RBP19.34■□□□□ 0.69
USB1-211ENST00000565662 PURBQ96QR8 312 aaKnown RBP19.34■□□□□ 0.69
USB1-211ENST00000565662 PIGSQ96S52 555 aa19.34■□□□□ 0.69
USB1-211ENST00000565662 SCN10AQ9Y5Y9 1956 aa19.33■□□□□ 0.69
USB1-211ENST00000565662 TMEM265A0A087WTH1 108 aa19.33■□□□□ 0.68
USB1-211ENST00000565662 CD4P01730 458 aa19.33■□□□□ 0.68
USB1-211ENST00000565662 CHST3Q7LGC8 479 aa19.33■□□□□ 0.68
USB1-211ENST00000565662 TAAR1Q96RJ0 339 aa19.33■□□□□ 0.68
USB1-211ENST00000565662 PDCD2LQ9BRP1 358 aa19.33■□□□□ 0.68
USB1-211ENST00000565662 MRVI1Q9Y6F6 885 aa19.33■□□□□ 0.68
USB1-211ENST00000565662 PFKMP08237 780 aa19.32■□□□□ 0.68
USB1-211ENST00000565662 EIF2AK2P19525 551 aaKnown RBP19.32■□□□□ 0.68
USB1-211ENST00000565662 CASTP20810 708 aaKnown RBP19.32■□□□□ 0.68
USB1-211ENST00000565662 SMAD3P84022 425 aaKnown RBP19.32■□□□□ 0.68
USB1-211ENST00000565662 LAMC2Q13753 1193 aa19.32■□□□□ 0.68
USB1-211ENST00000565662 CCDC62Q6P9F0 684 aa19.32■□□□□ 0.68
USB1-211ENST00000565662 DHX32Q7L7V1 743 aaKnown RBP19.32■□□□□ 0.68
USB1-211ENST00000565662 EHMT1Q9H9B1 1298 aa19.32■□□□□ 0.68
USB1-211ENST00000565662 TAF6LQ9Y6J9 622 aa19.32■□□□□ 0.68
USB1-211ENST00000565662 FRMPD4Q14CM0 1322 aa19.31■□□□□ 0.68
USB1-211ENST00000565662 CCDC196A0A1B0GTZ2 297 aa19.31■□□□□ 0.68
USB1-211ENST00000565662 PIK3CDO00329 1044 aa19.31■□□□□ 0.68
USB1-211ENST00000565662 CYTH3O43739 400 aa19.31■□□□□ 0.68
USB1-211ENST00000565662 DGKDQ16760 1214 aa19.31■□□□□ 0.68
USB1-211ENST00000565662 SH3RF1Q7Z6J0 888 aa19.31■□□□□ 0.68
USB1-211ENST00000565662 CCDC155Q8N6L0 562 aa19.31■□□□□ 0.68
USB1-211ENST00000565662 RNPC3Q96LT9 517 aaKnown RBP19.31■□□□□ 0.68
USB1-211ENST00000565662 GLT8D2Q9H1C3 349 aa19.31■□□□□ 0.68
USB1-211ENST00000565662 HIPK3Q9H422 1215 aa19.31■□□□□ 0.68
USB1-211ENST00000565662 COL20A1Q9P218 1284 aa19.31■□□□□ 0.68
USB1-211ENST00000565662 OPLAHO14841 1288 aa19.3■□□□□ 0.68
USB1-211ENST00000565662 PPP1R11O60927 126 aaPredicted RBP19.3■□□□□ 0.68
USB1-211ENST00000565662 MYL3P08590 195 aa19.3■□□□□ 0.68
USB1-211ENST00000565662 PSMA5P28066 241 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms