RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 SEC63Q9UGP8 760 aaKnown RBP20.66■□□□□ 0.9
CMTM3-204ENST00000562357 LCTP09848 1927 aa20.65■□□□□ 0.9
CMTM3-204ENST00000562357 PNMA6FA0A0J9YX94 578 aa20.65■□□□□ 0.9
CMTM3-204ENST00000562357 SH2B2O14492 632 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-204ENST00000562357 LIFRP42702 1097 aa20.65■□□□□ 0.9
CMTM3-204ENST00000562357 KRT32Q14532 448 aa20.65■□□□□ 0.9
CMTM3-204ENST00000562357 SYNE3Q6ZMZ3 975 aa20.65■□□□□ 0.9
CMTM3-204ENST00000562357 TBC1D5Q92609 795 aa20.65■□□□□ 0.9
CMTM3-204ENST00000562357 BADQ92934 168 aa20.65■□□□□ 0.9
CMTM3-204ENST00000562357 RRP36Q96EU6 259 aaKnown RBP20.65■□□□□ 0.9
CMTM3-204ENST00000562357 TAAR1Q96RJ0 339 aa20.65■□□□□ 0.9
CMTM3-204ENST00000562357 POLR3EQ9NVU0 708 aa20.65■□□□□ 0.9
CMTM3-204ENST00000562357 SLC12A7Q9Y666 1083 aa20.65■□□□□ 0.9
CMTM3-204ENST00000562357 RANBP2P49792 3224 aaKnown RBP20.64■□□□□ 0.89
CMTM3-204ENST00000562357 TRIM43BA6NCK2 446 aa20.64■□□□□ 0.89
CMTM3-204ENST00000562357 GCOM1H8Y6P7 765 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-204ENST00000562357 KIAA0355O15063 1070 aa20.64■□□□□ 0.89
CMTM3-204ENST00000562357 POLR2MP0CAP2 368 aa20.64■□□□□ 0.89
CMTM3-204ENST00000562357 TXNP10599 105 aaKnown RBP20.64■□□□□ 0.89
CMTM3-204ENST00000562357 EIF2AK2P19525 551 aaKnown RBP20.64■□□□□ 0.89
CMTM3-204ENST00000562357 HSD17B4P51659 736 aa20.64■□□□□ 0.89
CMTM3-204ENST00000562357 LRIT3Q3SXY7 679 aa20.64■□□□□ 0.89
CMTM3-204ENST00000562357 SH3RF1Q7Z6J0 888 aa20.64■□□□□ 0.89
CMTM3-204ENST00000562357 TRIM43Q96BQ3 446 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-204ENST00000562357 NEK1Q96PY6 1258 aa20.64■□□□□ 0.89
CMTM3-204ENST00000562357 MYL10Q9BUA6 226 aa20.64■□□□□ 0.89
CMTM3-204ENST00000562357 COL20A1Q9P218 1284 aa20.64■□□□□ 0.89
CMTM3-204ENST00000562357 PPP1R11O60927 126 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-204ENST00000562357 SMARCA1P28370 1054 aa20.63■□□□□ 0.89
CMTM3-204ENST00000562357 FAAP100Q0VG06 881 aa20.63■□□□□ 0.89
CMTM3-204ENST00000562357 SEPT14Q6ZU15 432 aa20.63■□□□□ 0.89
CMTM3-204ENST00000562357 PIBF1Q8WXW3 757 aa20.63■□□□□ 0.89
CMTM3-204ENST00000562357 SPZ1Q9BXG8 430 aa20.63■□□□□ 0.89
CMTM3-204ENST00000562357 PXMP2Q9NR77 195 aa20.63■□□□□ 0.89
CMTM3-204ENST00000562357 CYTH3O43739 400 aa20.62■□□□□ 0.89
CMTM3-204ENST00000562357 KPNA6O60684 536 aa20.62■□□□□ 0.89
CMTM3-204ENST00000562357 EIF3JO75822 258 aaKnown RBP20.62■□□□□ 0.89
CMTM3-204ENST00000562357 CDK7P50613 346 aa20.62■□□□□ 0.89
CMTM3-204ENST00000562357 GHRHRQ02643 423 aa20.62■□□□□ 0.89
CMTM3-204ENST00000562357 ITGA7Q13683 1181 aa20.62■□□□□ 0.89
CMTM3-204ENST00000562357 TMEM63BQ5T3F8 832 aa20.62■□□□□ 0.89
CMTM3-204ENST00000562357 MYH6P13533 1939 aa20.62■□□□□ 0.89
CMTM3-204ENST00000562357 NR3C2P08235 984 aa20.61■□□□□ 0.89
CMTM3-204ENST00000562357 MYL3P08590 195 aa20.61■□□□□ 0.89
CMTM3-204ENST00000562357 HMGB1P09429 215 aaKnown RBP20.61■□□□□ 0.89
CMTM3-204ENST00000562357 PTGS1P23219 599 aa20.61■□□□□ 0.89
CMTM3-204ENST00000562357 LRRC2Q9BYS8 371 aa20.61■□□□□ 0.89
CMTM3-204ENST00000562357 SOX1O00570 391 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-204ENST00000562357 OPLAHO14841 1288 aa20.6■□□□□ 0.89
CMTM3-204ENST00000562357 REC8O95072 547 aa20.6■□□□□ 0.89
CMTM3-204ENST00000562357 HOXA13P31271 388 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-204ENST00000562357 FGD1P98174 961 aa20.6■□□□□ 0.89
CMTM3-204ENST00000562357 FPGSQ05932 587 aa20.6■□□□□ 0.89
CMTM3-204ENST00000562357 SLC35G1Q2M3R5 365 aa20.6■□□□□ 0.89
CMTM3-204ENST00000562357 DHX32Q7L7V1 743 aaKnown RBP20.6■□□□□ 0.89
CMTM3-204ENST00000562357 MICU3Q86XE3 530 aa20.6■□□□□ 0.89
CMTM3-204ENST00000562357 FAM126BQ8IXS8 530 aa20.6■□□□□ 0.89
CMTM3-204ENST00000562357 CUL5Q93034 780 aa20.6■□□□□ 0.89
CMTM3-204ENST00000562357 LRCH3Q96II8 777 aa20.6■□□□□ 0.89
CMTM3-204ENST00000562357 MTG1Q9BT17 334 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-204ENST00000562357 MRVI1Q9Y6F6 885 aa20.6■□□□□ 0.89
CMTM3-204ENST00000562357 TIMP1P01033 207 aa20.59■□□□□ 0.89
CMTM3-204ENST00000562357 GH1P01241 217 aa20.59■□□□□ 0.89
CMTM3-204ENST00000562357 MYCLP12524 364 aaPredicted RBP20.59■□□□□ 0.89
CMTM3-204ENST00000562357 RXRAP19793 462 aa20.59■□□□□ 0.89
CMTM3-204ENST00000562357 TSGA10IPQ3SY00 556 aa20.59■□□□□ 0.89
CMTM3-204ENST00000562357 GPR153Q6NV75 609 aa20.59■□□□□ 0.89
CMTM3-204ENST00000562357 SGMS1Q86VZ5 419 aa20.59■□□□□ 0.89
CMTM3-204ENST00000562357 FCHSD1Q86WN1 690 aa20.59■□□□□ 0.89
CMTM3-204ENST00000562357 PDCD2LQ9BRP1 358 aa20.59■□□□□ 0.89
CMTM3-204ENST00000562357 TBX21Q9UL17 535 aa20.59■□□□□ 0.89
CMTM3-204ENST00000562357 LTBP2Q14767 1821 aa20.59■□□□□ 0.89
CMTM3-204ENST00000562357 DNAH12Q6ZR08 3092 aa20.58■□□□□ 0.89
CMTM3-204ENST00000562357 CCND2P30279 289 aa20.58■□□□□ 0.89
CMTM3-204ENST00000562357 PSMC6P62333 389 aa20.58■□□□□ 0.89
CMTM3-204ENST00000562357 PURAQ00577 322 aaKnown RBP20.58■□□□□ 0.89
CMTM3-204ENST00000562357 KCNV1Q6PIU1 500 aa20.58■□□□□ 0.89
CMTM3-204ENST00000562357 FANCBQ8NB91 859 aa20.58■□□□□ 0.89
CMTM3-204ENST00000562357 SLC43A3Q8NBI5 491 aa20.58■□□□□ 0.89
CMTM3-204ENST00000562357 COPS5Q92905 334 aa20.58■□□□□ 0.89
CMTM3-204ENST00000562357 RBM28Q9NW13 759 aaKnown RBP20.58■□□□□ 0.89
CMTM3-204ENST00000562357 A6NJR5 290 aa20.57■□□□□ 0.88
CMTM3-204ENST00000562357 ARIH2O95376 493 aa20.57■□□□□ 0.88
CMTM3-204ENST00000562357 PLEKHA8P1O95397 391 aa20.57■□□□□ 0.88
CMTM3-204ENST00000562357 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-204ENST00000562357 LY6KQ17RY6 165 aa20.57■□□□□ 0.88
CMTM3-204ENST00000562357 CCDC62Q6P9F0 684 aa20.57■□□□□ 0.88
CMTM3-204ENST00000562357 RAB11FIP4Q86YS3 637 aa20.57■□□□□ 0.88
CMTM3-204ENST00000562357 TMEM199Q8N511 208 aa20.57■□□□□ 0.88
CMTM3-204ENST00000562357 SMARCC2Q8TAQ2 1214 aa20.57■□□□□ 0.88
CMTM3-204ENST00000562357 SUPT20HL2P0C7V6 817 aa20.56■□□□□ 0.88
CMTM3-204ENST00000562357 ITGB8P26012 769 aa20.56■□□□□ 0.88
CMTM3-204ENST00000562357 PPIGQ13427 754 aaKnown RBP eCLIP20.56■□□□□ 0.88
CMTM3-204ENST00000562357 PGM5Q15124 567 aa20.56■□□□□ 0.88
CMTM3-204ENST00000562357 SHHQ15465 462 aa20.56■□□□□ 0.88
CMTM3-204ENST00000562357 GNPTABQ3T906 1256 aa20.56■□□□□ 0.88
CMTM3-204ENST00000562357 FAM47CQ5HY64 1035 aa20.56■□□□□ 0.88
CMTM3-204ENST00000562357 ERICH6BQ5W0A0 696 aa20.56■□□□□ 0.88
CMTM3-204ENST00000562357 MFSD5Q6N075 450 aa20.56■□□□□ 0.88
CMTM3-204ENST00000562357 APOA5Q6Q788 366 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms