RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 C8orf76Q96K31 380 aa11.54□□□□□ -0.56
USP3-216ENST00000559873 MCOLN1Q9GZU1 580 aa11.54□□□□□ -0.56
USP3-216ENST00000559873 PCDHA4Q9UN74 947 aa11.54□□□□□ -0.56
USP3-216ENST00000559873 PLXNA1Q9UIW2 1896 aa11.54□□□□□ -0.56
USP3-216ENST00000559873 SOWAHBA6NEL2 793 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 MEIS2O14770 477 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 STAM2O75886 525 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 PRKAR2AP13861 404 aaKnown RBP11.53□□□□□ -0.56
USP3-216ENST00000559873 FDPSP14324 419 aaKnown RBP11.53□□□□□ -0.56
USP3-216ENST00000559873 EIF2AK2P19525 551 aaKnown RBP11.53□□□□□ -0.56
USP3-216ENST00000559873 KRT2P35908 639 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 GNL2Q13823 731 aaKnown RBP11.53□□□□□ -0.56
USP3-216ENST00000559873 STXBP2Q15833 593 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 CCL14Q16627 93 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 UBE2SQ16763 222 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 GNPTABQ3T906 1256 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 XRRA1Q6P2D8 792 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 BLIDQ8IZY5 108 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 ARMC5Q96C12 935 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 AIFM3Q96NN9 605 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 ABHD16BQ9H3Z7 469 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 VTA1Q9NP79 307 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 PXMP2Q9NR77 195 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.53□□□□□ -0.56
USP3-216ENST00000559873 COL20A1Q9P218 1284 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 ZHX1Q9UKY1 873 aaPredicted RBP11.53□□□□□ -0.56
USP3-216ENST00000559873 FRMPD4Q14CM0 1322 aa11.53□□□□□ -0.56
USP3-216ENST00000559873 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.56
USP3-216ENST00000559873 H3BQV1 296 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 MSCO60682 206 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 EDNRBP24530 442 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 GJB2P29033 226 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 CCND2P30279 289 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 CYP2C19P33261 490 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 ANP32AP39687 249 aaKnown RBP11.52□□□□□ -0.57
USP3-216ENST00000559873 PGM5Q15124 567 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 IFFO2Q5TF58 517 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 KRT40Q6A162 431 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 KRT25Q7Z3Z0 450 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 MORC4Q8TE76 937 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 SH3TC2Q8TF17 1288 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 TBC1D5Q92609 795 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 FGD4Q96M96 766 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 TAAR1Q96RJ0 339 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 PDCD2LQ9BRP1 358 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 PHF20Q9BVI0 1012 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 ANO3Q9BYT9 981 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 HMX1Q9NP08 348 aaPredicted RBP11.52□□□□□ -0.57
USP3-216ENST00000559873 FLRT1Q9NZU1 646 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 RPTORQ8N122 1335 aa11.52□□□□□ -0.57
USP3-216ENST00000559873 ZNFX1Q9P2E3 1918 aaKnown RBP11.52□□□□□ -0.57
USP3-216ENST00000559873 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
USP3-216ENST00000559873 EIF3JO75822 258 aaKnown RBP11.51□□□□□ -0.57
USP3-216ENST00000559873 MMP1P03956 469 aa11.51□□□□□ -0.57
USP3-216ENST00000559873 NR3C2P08235 984 aa11.51□□□□□ -0.57
USP3-216ENST00000559873 CYBAP13498 195 aa11.51□□□□□ -0.57
USP3-216ENST00000559873 PDIA4P13667 645 aaKnown RBP11.51□□□□□ -0.57
USP3-216ENST00000559873 CLK2P49760 499 aaKnown RBP11.51□□□□□ -0.57
USP3-216ENST00000559873 MAP3K21Q5TCX8 1036 aa11.51□□□□□ -0.57
USP3-216ENST00000559873 JAKMIP3Q5VZ66 844 aa11.51□□□□□ -0.57
USP3-216ENST00000559873 PCNX4Q63HM2 1172 aa11.51□□□□□ -0.57
USP3-216ENST00000559873 ZNF333Q96JL9 665 aa11.51□□□□□ -0.57
USP3-216ENST00000559873 PCDHA6Q9UN73 950 aa11.51□□□□□ -0.57
USP3-216ENST00000559873 KCNJ14Q9UNX9 436 aa11.51□□□□□ -0.57
USP3-216ENST00000559873 PCDHA8Q9Y5H6 950 aa11.51□□□□□ -0.57
USP3-216ENST00000559873 LCTP09848 1927 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 MYCLP12524 364 aaPredicted RBP11.5□□□□□ -0.57
USP3-216ENST00000559873 AKR1A1P14550 325 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 CAPN2P17655 700 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 CNGA1P29973 690 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 SREBF1P36956 1147 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 FOSBP53539 338 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 CACNB2Q08289 660 aaPredicted RBP11.5□□□□□ -0.57
USP3-216ENST00000559873 ACVR2BQ13705 512 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 NONOQ15233 471 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP3-216ENST00000559873 KCNV1Q6PIU1 500 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 NLRX1Q86UT6 975 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 FBXO16Q8IX29 292 aaPredicted RBP11.5□□□□□ -0.57
USP3-216ENST00000559873 DIS3L2Q8IYB7 885 aaKnown RBP11.5□□□□□ -0.57
USP3-216ENST00000559873 TNS4Q8IZW8 715 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 FBXO18Q8NFZ0 1043 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 SCFD2Q8WU76 684 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 CDHR1Q96JP9 859 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 PURBQ96QR8 312 aaKnown RBP11.5□□□□□ -0.57
USP3-216ENST00000559873 NAP1L4Q99733 375 aaKnown RBP11.5□□□□□ -0.57
USP3-216ENST00000559873 TMEM106CQ9BVX2 250 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■■■■■ 28.5
USP3-216ENST00000559873 ASTN1O14525 1302 aa11.5□□□□□ -0.57
USP3-216ENST00000559873 LRRC37A2A6NM11 1700 aa11.49□□□□□ -0.57
USP3-216ENST00000559873 SEPT4O43236 478 aa11.49□□□□□ -0.57
USP3-216ENST00000559873 SNAI1O95863 264 aaPredicted RBP11.49□□□□□ -0.57
USP3-216ENST00000559873 IGHA2P01877 340 aa11.49□□□□□ -0.57
USP3-216ENST00000559873 ZNF76P36508 570 aa11.49□□□□□ -0.57
USP3-216ENST00000559873 ARHGAP4P98171 946 aa11.49□□□□□ -0.57
USP3-216ENST00000559873 SETQ01105 290 aaPredicted RBP11.49□□□□□ -0.57
USP3-216ENST00000559873 TTLL4Q14679 1199 aa11.49□□□□□ -0.57
USP3-216ENST00000559873 COL13A1Q5TAT6 717 aaPredicted RBP11.49□□□□□ -0.57
USP3-216ENST00000559873 LARP1BQ659C4 914 aaKnown RBP11.49□□□□□ -0.57
USP3-216ENST00000559873 EEPD1Q7L9B9 569 aa11.49□□□□□ -0.57
USP3-216ENST00000559873 VSIG10LQ86VR7 867 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms