RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 KCNV1Q6PIU1 500 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 SLC30A10Q6XR72 485 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 PHKBQ93100 1093 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.72■□□□□ 0.116e-7■□□□□ 8.9
SHMT2-234ENST00000557703 PXMP2Q9NR77 195 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-234ENST00000557703 FAM184BQ9ULE4 1060 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 Q9Y3F1 56 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 KIF3AQ9Y496 699 aa15.72■□□□□ 0.11
SHMT2-234ENST00000557703 FRMPD4Q14CM0 1322 aa15.71■□□□□ 0.11
SHMT2-234ENST00000557703 SMCO2A6NFE2 343 aa15.71■□□□□ 0.11
SHMT2-234ENST00000557703 SPDYE3A6NKU9 549 aa15.71■□□□□ 0.11
SHMT2-234ENST00000557703 AKR1A1P14550 325 aa15.71■□□□□ 0.11
SHMT2-234ENST00000557703 ADCY7P51828 1080 aa15.71■□□□□ 0.11
SHMT2-234ENST00000557703 PDE4DQ08499 809 aa15.71■□□□□ 0.11
SHMT2-234ENST00000557703 ANKLE1Q8NAG6 615 aa15.71■□□□□ 0.11
SHMT2-234ENST00000557703 RBBP6Q7Z6E9 1792 aaKnown RBP15.71■□□□□ 0.11
SHMT2-234ENST00000557703 RBM47A0AV96 593 aaKnown RBP15.7■□□□□ 0.1
SHMT2-234ENST00000557703 NKRFO15226 690 aaKnown RBP eCLIP15.7■□□□□ 0.1
SHMT2-234ENST00000557703 SGPL1O95470 568 aa15.7■□□□□ 0.1
SHMT2-234ENST00000557703 NR3C2P08235 984 aa15.7■□□□□ 0.1
SHMT2-234ENST00000557703 ZNF865P0CJ78 1059 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-234ENST00000557703 TGFB3P10600 412 aa15.7■□□□□ 0.1
SHMT2-234ENST00000557703 VSIG10LQ86VR7 867 aa15.7■□□□□ 0.1
SHMT2-234ENST00000557703 TBC1D5Q92609 795 aa15.7■□□□□ 0.1
SHMT2-234ENST00000557703 GPKOWQ92917 476 aaPredicted RBP eCLIP15.7■□□□□ 0.1
SHMT2-234ENST00000557703 TAAR1Q96RJ0 339 aa15.7■□□□□ 0.1
SHMT2-234ENST00000557703 PDCD2LQ9BRP1 358 aa15.7■□□□□ 0.1
SHMT2-234ENST00000557703 LARP6Q9BRS8 491 aaKnown RBP15.7■□□□□ 0.1
SHMT2-234ENST00000557703 UNC93B1Q9H1C4 597 aa15.7■□□□□ 0.1
SHMT2-234ENST00000557703 ORC3Q9UBD5 711 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-234ENST00000557703 DDX20Q9UHI6 824 aaKnown RBP15.7■□□□□ 0.1
SHMT2-234ENST00000557703 hCG_1642624A0A1W2PR95 340 aa15.69■□□□□ 0.1
SHMT2-234ENST00000557703 MAFGO15525 162 aa15.69■□□□□ 0.1
SHMT2-234ENST00000557703 CCND2P30279 289 aa15.69■□□□□ 0.1
SHMT2-234ENST00000557703 CLK2P49760 499 aaKnown RBP15.69■□□□□ 0.1
SHMT2-234ENST00000557703 MTFR1Q15390 333 aa15.69■□□□□ 0.1
SHMT2-234ENST00000557703 DAGLBQ8NCG7 672 aa15.69■□□□□ 0.1
SHMT2-234ENST00000557703 ARRDC4Q8NCT1 418 aa15.69■□□□□ 0.1
SHMT2-234ENST00000557703 NSUN7Q8NE18 718 aaKnown RBP15.69■□□□□ 0.1
SHMT2-234ENST00000557703 SCFD2Q8WU76 684 aa15.69■□□□□ 0.1
SHMT2-234ENST00000557703 CRISPLD2Q9H0B8 497 aa15.69■□□□□ 0.1
SHMT2-234ENST00000557703 ASTN1O14525 1302 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 CCDC85CA6NKD9 419 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 DUSP11O75319 330 aaKnown RBP15.68■□□□□ 0.1
SHMT2-234ENST00000557703 CTDNEP1O95476 244 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 RARBP10826 455 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 TAL1P17542 331 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-234ENST00000557703 CNGA1P29973 690 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 HOXA13P31271 388 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-234ENST00000557703 NKX3-2P78367 333 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 TRIM32Q13049 653 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 PGM5Q15124 567 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 GNPTABQ3T906 1256 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 PCNX4Q63HM2 1172 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 USP17L6PQ6QN14 398 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 FCHSD1Q86WN1 690 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 REXO1Q8N1G1 1221 aaKnown RBP15.68■□□□□ 0.1
SHMT2-234ENST00000557703 U2AF1L4Q8WU68 220 aaKnown RBP15.68■□□□□ 0.1
SHMT2-234ENST00000557703 SNX21Q969T3 373 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 CDHR1Q96JP9 859 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 KATNBL1Q9H079 304 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 SPC25Q9HBM1 224 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 COL20A1Q9P218 1284 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 OGDHLQ9ULD0 1010 aa15.68■□□□□ 0.1
SHMT2-234ENST00000557703 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-234ENST00000557703 LARGE1O95461 756 aa15.67■□□□□ 0.1
SHMT2-234ENST00000557703 NLRP5P59047 1200 aa15.67■□□□□ 0.1
SHMT2-234ENST00000557703 TTLL4Q14679 1199 aa15.67■□□□□ 0.1
SHMT2-234ENST00000557703 CCDC144BQ3MJ40 725 aa15.67■□□□□ 0.1
SHMT2-234ENST00000557703 LHX8Q68G74 356 aa15.67■□□□□ 0.1
SHMT2-234ENST00000557703 TYW1BQ6NUM6 668 aa15.67■□□□□ 0.1
SHMT2-234ENST00000557703 NOL8Q76FK4 1167 aaKnown RBP15.67■□□□□ 0.1
SHMT2-234ENST00000557703 NECAB1Q8N987 351 aa15.67■□□□□ 0.1
SHMT2-234ENST00000557703 TMX3Q96JJ7 454 aa15.67■□□□□ 0.1
SHMT2-234ENST00000557703 DEFB118Q96PH6 123 aa15.67■□□□□ 0.1
SHMT2-234ENST00000557703 BRMS1Q9HCU9 246 aa15.67■□□□□ 0.1
SHMT2-234ENST00000557703 MCM3APO60318 1980 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 TFRCP02786 760 aaKnown RBP15.66■□□□□ 0.1
SHMT2-234ENST00000557703 EIF2AK2P19525 551 aaKnown RBP15.66■□□□□ 0.1
SHMT2-234ENST00000557703 CCND3P30281 292 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-234ENST00000557703 TRIM29Q14134 588 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 DUSP28Q4G0W2 176 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 TAPT1Q6NXT6 567 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 CCDC83Q8IWF9 413 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 TRPV1Q8NER1 839 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 ALG1Q9BT22 464 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 PHF20Q9BVI0 1012 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 ZHX1Q9UKY1 873 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-234ENST00000557703 PCDHA6Q9UN73 950 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 PCDHA4Q9UN74 947 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 PCDHA8Q9Y5H6 950 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 LCTP09848 1927 aa15.66■□□□□ 0.1
SHMT2-234ENST00000557703 CYP3A4P08684 503 aa15.65■□□□□ 0.1
SHMT2-234ENST00000557703 PDIA4P13667 645 aaKnown RBP15.65■□□□□ 0.1
SHMT2-234ENST00000557703 FDPSP14324 419 aaKnown RBP15.65■□□□□ 0.1
SHMT2-234ENST00000557703 ICAM3P32942 547 aa15.65■□□□□ 0.1
SHMT2-234ENST00000557703 SREBF1P36956 1147 aa15.65■□□□□ 0.1
SHMT2-234ENST00000557703 USP11P51784 963 aa15.65■□□□□ 0.1
SHMT2-234ENST00000557703 TNFAIP2Q03169 654 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms