RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 ZBBXA8MT70 800 aa19.41■□□□□ 0.7
NEK9-211ENST00000557673 B4E1Z4 1266 aa19.41■□□□□ 0.7
NEK9-211ENST00000557673 KDM4AO75164 1064 aa19.41■□□□□ 0.7
NEK9-211ENST00000557673 REC8O95072 547 aa19.41■□□□□ 0.7
NEK9-211ENST00000557673 ATP2A2P16615 1042 aaKnown RBP19.41■□□□□ 0.7
NEK9-211ENST00000557673 ALDH5A1P51649 535 aaPredicted RBP19.41■□□□□ 0.7
NEK9-211ENST00000557673 BAATQ14032 418 aaPredicted RBP19.41■□□□□ 0.7
NEK9-211ENST00000557673 YBX2Q9Y2T7 364 aaKnown RBP19.41■□□□□ 0.7
NEK9-211ENST00000557673 TAF6LQ9Y6J9 622 aa19.41■□□□□ 0.7
NEK9-211ENST00000557673 PTPDC1A2A3K4 754 aa19.4■□□□□ 0.7
NEK9-211ENST00000557673 B4DLN1 442 aa19.4■□□□□ 0.7
NEK9-211ENST00000557673 NKRFO15226 690 aaKnown RBP eCLIP19.4■□□□□ 0.7
NEK9-211ENST00000557673 KPNA6O60684 536 aa19.4■□□□□ 0.7
NEK9-211ENST00000557673 ACTN1P12814 892 aa19.4■□□□□ 0.7
NEK9-211ENST00000557673 SLC16A2P36021 539 aa19.4■□□□□ 0.7
NEK9-211ENST00000557673 MRPL12P52815 198 aaKnown RBP19.4■□□□□ 0.7
NEK9-211ENST00000557673 PURAQ00577 322 aaKnown RBP19.4■□□□□ 0.7
NEK9-211ENST00000557673 SYDE2Q5VT97 1194 aa19.4■□□□□ 0.7
NEK9-211ENST00000557673 ADAMTS19Q8TE59 1207 aa19.4■□□□□ 0.7
NEK9-211ENST00000557673 TTC14Q96N46 770 aa19.4■□□□□ 0.7
NEK9-211ENST00000557673 MTG1Q9BT17 334 aaPredicted RBP19.4■□□□□ 0.7
NEK9-211ENST00000557673 GPCPD1Q9NPB8 672 aa19.4■□□□□ 0.7
NEK9-211ENST00000557673 DDX49Q9Y6V7 483 aaKnown RBP19.4■□□□□ 0.7
NEK9-211ENST00000557673 TNKSO95271 1327 aa19.4■□□□□ 0.7
NEK9-211ENST00000557673 RBM47A0AV96 593 aaKnown RBP19.39■□□□□ 0.69
NEK9-211ENST00000557673 SLC27A2O14975 620 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 PDHBP11177 359 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 PTGS1P23219 599 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 RFC2P35250 354 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 NT5C2P49902 561 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 RABGGTBP53611 331 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 NECTIN1Q15223 517 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 AAK1Q2M2I8 961 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 CREB3L3Q68CJ9 461 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 STOX1Q6ZVD7 989 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 OR6J1Q8NGC5 347 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 SCLYQ96I15 445 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 CNNM2Q9H8M5 875 aa19.39■□□□□ 0.69
NEK9-211ENST00000557673 MUC3AQ02505 3323 aa19.38■□□□□ 0.69
NEK9-211ENST00000557673 MYL3P08590 195 aa19.38■□□□□ 0.69
NEK9-211ENST00000557673 PDE4DQ08499 809 aa19.38■□□□□ 0.69
NEK9-211ENST00000557673 TMEM67Q5HYA8 995 aa19.38■□□□□ 0.69
NEK9-211ENST00000557673 TMEM63BQ5T3F8 832 aa19.38■□□□□ 0.69
NEK9-211ENST00000557673 PURBQ96QR8 312 aaKnown RBP19.38■□□□□ 0.69
NEK9-211ENST00000557673 UHRF1Q96T88 793 aaPredicted RBP19.38■□□□□ 0.69
NEK9-211ENST00000557673 TRMT13Q9NUP7 481 aaKnown RBP19.38■□□□□ 0.69
NEK9-211ENST00000557673 NFIBO00712 420 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 SNHG28P0DPA3 235 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 CYP2C9P11712 490 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 COL9A1P20849 921 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 ZNF543Q08ER8 600 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 PPP2R5BQ15173 497 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 NFRKBQ6P4R8 1299 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 RNF207Q6ZRF8 634 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 IQCA1Q86XH1 822 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 DGKHQ86XP1 1220 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 RETREG2Q8NC44 543 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 DNERQ8NFT8 737 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 SCFD2Q8WU76 684 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 ZSWIM5Q9P217 1185 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 LRRC37A2A6NM11 1700 aa19.37■□□□□ 0.69
NEK9-211ENST00000557673 E7EWF7 191 aa19.36■□□□□ 0.69
NEK9-211ENST00000557673 PITPNM1O00562 1244 aa19.36■□□□□ 0.69
NEK9-211ENST00000557673 EPB41L2O43491 1005 aaKnown RBP19.36■□□□□ 0.69
NEK9-211ENST00000557673 GTPBP6O43824 516 aaPredicted RBP19.36■□□□□ 0.69
NEK9-211ENST00000557673 CALML3P27482 149 aa19.36■□□□□ 0.69
NEK9-211ENST00000557673 PTPN11Q06124 597 aaPredicted RBP19.36■□□□□ 0.69
NEK9-211ENST00000557673 C8orf34Q49A92 452 aa19.36■□□□□ 0.69
NEK9-211ENST00000557673 FAM47CQ5HY64 1035 aa19.36■□□□□ 0.69
NEK9-211ENST00000557673 DEFB128Q7Z7B8 93 aa19.36■□□□□ 0.69
NEK9-211ENST00000557673 ENAHQ8N8S7 591 aaPredicted RBP19.36■□□□□ 0.69
NEK9-211ENST00000557673 PHOSPHO2Q8TCD6 241 aa19.36■□□□□ 0.69
NEK9-211ENST00000557673 ZSCAN10Q96SZ4 725 aaPredicted RBP19.36■□□□□ 0.69
NEK9-211ENST00000557673 SLC9A7Q96T83 725 aa19.36■□□□□ 0.69
NEK9-211ENST00000557673 KRT23Q9C075 422 aa19.36■□□□□ 0.69
NEK9-211ENST00000557673 NCOR1O75376 2440 aa19.36■□□□□ 0.69
NEK9-211ENST00000557673 A6NJR5 290 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 KIF28PB7ZC32 967 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 MYOGP15173 224 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 BFSP2Q13515 415 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 TTLL4Q14679 1199 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 NBPF20Q3BBV1 942 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 CCDC178Q5BJE1 867 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 RNF20Q5VTR2 975 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 MICALL1Q8N3F8 863 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 PNMA1Q8ND90 353 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 MAF1Q9H063 256 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 NOD1Q9Y239 953 aa19.35■□□□□ 0.69
NEK9-211ENST00000557673 WDR19Q8NEZ3 1342 aa19.34■□□□□ 0.69
NEK9-211ENST00000557673 GOLGA8HP0CJ92 632 aa19.34■□□□□ 0.69
NEK9-211ENST00000557673 HSPA4P34932 840 aa19.34■□□□□ 0.69
NEK9-211ENST00000557673 RPS6P62753 249 aaKnown RBP19.34■□□□□ 0.69
NEK9-211ENST00000557673 SLC30A10Q6XR72 485 aa19.34■□□□□ 0.69
NEK9-211ENST00000557673 RALYLQ86SE5 291 aaKnown RBP19.34■□□□□ 0.69
NEK9-211ENST00000557673 CLEC4DQ8WXI8 215 aa19.34■□□□□ 0.69
NEK9-211ENST00000557673 ANKS1AQ92625 1134 aa19.34■□□□□ 0.69
NEK9-211ENST00000557673 VWCEQ96DN2 955 aa19.34■□□□□ 0.69
NEK9-211ENST00000557673 CPVLQ9H3G5 476 aa19.34■□□□□ 0.69
NEK9-211ENST00000557673 KAT14Q9H8E8 782 aa19.34■□□□□ 0.69
NEK9-211ENST00000557673 RAPGEFL1Q9UHV5 662 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms