RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 A6NJR5 290 aa17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 TRIM6-TRIM34B2RNG4 842 aa17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 NKRFO15226 690 aaKnown RBP eCLIP17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 ARHGEF15O94989 841 aa17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 PFKMP08237 780 aa17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 COL9A1P20849 921 aa17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 RRP1P56182 461 aaKnown RBP17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 BRDTQ58F21 947 aaPredicted RBP17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 NFRKBQ6P4R8 1299 aa17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 DNERQ8NFT8 737 aa17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 RILPL2Q969X0 211 aa17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 NECAB3Q96P71 396 aaPredicted RBP17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 UHRF1Q96T88 793 aaPredicted RBP17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 RAPGEFL1Q9UHV5 662 aa17.39■□□□□ 0.37
TMEM106C-216ENST00000551305 NEDD4P46934 1319 aa17.38■□□□□ 0.37
TMEM106C-216ENST00000551305 CCDC171Q6TFL3 1326 aa17.38■□□□□ 0.37
TMEM106C-216ENST00000551305 WDR19Q8NEZ3 1342 aa17.38■□□□□ 0.37
TMEM106C-216ENST00000551305 TFF2Q03403 129 aa17.38■□□□□ 0.37
TMEM106C-216ENST00000551305 KRT40Q6A162 431 aa17.38■□□□□ 0.37
TMEM106C-216ENST00000551305 RETREG2Q8NC44 543 aa17.38■□□□□ 0.37
TMEM106C-216ENST00000551305 TAAR1Q96RJ0 339 aa17.38■□□□□ 0.37
TMEM106C-216ENST00000551305 MPHOSPH6Q99547 160 aaKnown RBP17.38■□□□□ 0.37
TMEM106C-216ENST00000551305 FTOQ9C0B1 505 aaKnown RBP eCLIP17.38■□□□□ 0.37
TMEM106C-216ENST00000551305 LNPKQ9C0E8 428 aa17.38■□□□□ 0.37
TMEM106C-216ENST00000551305 PNMA2Q9UL42 364 aa17.38■□□□□ 0.37
TMEM106C-216ENST00000551305 ZMYM6O95789 1325 aa17.37■□□□□ 0.37
TMEM106C-216ENST00000551305 RAD50Q92878 1312 aa17.37■□□□□ 0.37
TMEM106C-216ENST00000551305 KPNA6O60684 536 aa17.37■□□□□ 0.37
TMEM106C-216ENST00000551305 ACTN1P12814 892 aa17.37■□□□□ 0.37
TMEM106C-216ENST00000551305 LY6KQ17RY6 165 aa17.37■□□□□ 0.37
TMEM106C-216ENST00000551305 SEPT14Q6ZU15 432 aa17.37■□□□□ 0.37
TMEM106C-216ENST00000551305 MTCH2Q9Y6C9 303 aa17.37■□□□□ 0.37
TMEM106C-216ENST00000551305 SCN10AQ9Y5Y9 1956 aa17.37■□□□□ 0.37
TMEM106C-216ENST00000551305 RFC2P35250 354 aa17.36■□□□□ 0.37
TMEM106C-216ENST00000551305 HDAC1Q13547 482 aaPredicted RBP17.36■□□□□ 0.37
TMEM106C-216ENST00000551305 SKIV2LQ15477 1246 aaKnown RBP17.36■□□□□ 0.37
TMEM106C-216ENST00000551305 CCDC62Q6P9F0 684 aa17.36■□□□□ 0.37
TMEM106C-216ENST00000551305 IL27Q8NEV9 243 aa17.36■□□□□ 0.37
TMEM106C-216ENST00000551305 AFG1LQ8WV93 481 aa17.36■□□□□ 0.37
TMEM106C-216ENST00000551305 TSPYL2Q9H2G4 693 aaPredicted RBP17.36■□□□□ 0.37
TMEM106C-216ENST00000551305 COL20A1Q9P218 1284 aa17.36■□□□□ 0.37
TMEM106C-216ENST00000551305 NOD1Q9Y239 953 aa17.36■□□□□ 0.37
TMEM106C-216ENST00000551305 CHD7Q9P2D1 2997 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 B4DLN1 442 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 PITPNM1O00562 1244 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 PCP11498 1178 aaKnown RBP17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 BMP1P13497 986 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 SDSP20132 328 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 MRPL12P52815 198 aaKnown RBP17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 PTPN11Q06124 597 aaPredicted RBP17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 CDC37Q16543 378 aaPredicted RBP17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 PTGISQ16647 500 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 GPATCH4Q5T3I0 446 aaKnown RBP17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 CHST3Q7LGC8 479 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 SPRED2Q7Z698 418 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 DGKHQ86XP1 1220 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 HERC6Q8IVU3 1022 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 RGS22Q8NE09 1264 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 PHOSPHO2Q8TCD6 241 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 SYTL5Q8TDW5 730 aaPredicted RBP17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 ARNTL2Q8WYA1 636 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 ESR2Q92731 530 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 CTAGE1Q96RT6 745 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 SLC9A7Q96T83 725 aa17.35■□□□□ 0.37
TMEM106C-216ENST00000551305 ZNF213O14771 459 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 MMP3P08254 477 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 KCNQ1P51787 676 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 TAP1Q03518 808 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 BFSP2Q13515 415 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 GPNMBQ14956 572 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 GDF6Q6KF10 455 aaPredicted RBP17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 B4GALNT3Q6L9W6 998 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 TMCO2Q7Z6W1 182 aaPredicted RBP17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 ADGRF4Q8IZF3 695 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 PNMA1Q8ND90 353 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 KAT2BQ92831 832 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 RNF41Q9H4P4 317 aaPredicted RBP17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 VAT1LQ9HCJ6 419 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 MUC3AQ02505 3323 aa17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 TCF20Q9UGU0 1960 aaKnown RBP17.34■□□□□ 0.37
TMEM106C-216ENST00000551305 KDM4AO75164 1064 aa17.33■□□□□ 0.36
TMEM106C-216ENST00000551305 ARHGAP1Q07960 439 aa17.33■□□□□ 0.36
TMEM106C-216ENST00000551305 ABCB11O95342 1321 aa17.33■□□□□ 0.36
TMEM106C-216ENST00000551305 B4E1Z4 1266 aa17.32■□□□□ 0.36
TMEM106C-216ENST00000551305 GTPBP6O43824 516 aaPredicted RBP17.32■□□□□ 0.36
TMEM106C-216ENST00000551305 GH1P01241 217 aa17.32■□□□□ 0.36
TMEM106C-216ENST00000551305 POU3F3P20264 500 aaPredicted RBP17.32■□□□□ 0.36
TMEM106C-216ENST00000551305 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
TMEM106C-216ENST00000551305 TICAM2Q86XR7 235 aa17.32■□□□□ 0.36
TMEM106C-216ENST00000551305 NSUN6Q8TEA1 469 aaKnown RBP17.32■□□□□ 0.36
TMEM106C-216ENST00000551305 DHX38Q92620 1227 aaKnown RBP17.32■□□□□ 0.36
TMEM106C-216ENST00000551305 KAT14Q9H8E8 782 aa17.32■□□□□ 0.36
TMEM106C-216ENST00000551305 TET1Q8NFU7 2136 aa17.32■□□□□ 0.36
TMEM106C-216ENST00000551305 LCHNA4D1U4 455 aa17.31■□□□□ 0.36
TMEM106C-216ENST00000551305 KIF28PB7ZC32 967 aa17.31■□□□□ 0.36
TMEM106C-216ENST00000551305 EIF2AK2P19525 551 aaKnown RBP17.31■□□□□ 0.36
TMEM106C-216ENST00000551305 STXBP2Q15833 593 aa17.31■□□□□ 0.36
TMEM106C-216ENST00000551305 TCTN1Q2MV58 587 aa17.31■□□□□ 0.36
TMEM106C-216ENST00000551305 CWC27Q6UX04 472 aaKnown RBP17.31■□□□□ 0.36
TMEM106C-216ENST00000551305 ANKS1AQ92625 1134 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms