RNA–Protein interactions for RNA: ENST00000549455.1

ATXN2-218, Transcript of ataxin 2, humanhuman

TSL 4

Gene ATXN2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-218ENST00000549455 TTC14Q96N46 770 aa17.03■□□□□ 0.32
ATXN2-218ENST00000549455 ASB2Q96Q27 587 aa17.03■□□□□ 0.32
ATXN2-218ENST00000549455 CPVLQ9H3G5 476 aa17.03■□□□□ 0.32
ATXN2-218ENST00000549455 NEDD4P46934 1319 aa17.02■□□□□ 0.32
ATXN2-218ENST00000549455 PTPRSQ13332 1948 aa17.02■□□□□ 0.32
ATXN2-218ENST00000549455 B4DLN1 442 aa17.02■□□□□ 0.32
ATXN2-218ENST00000549455 SNHG28P0DPA3 235 aa17.02■□□□□ 0.32
ATXN2-218ENST00000549455 TXNP10599 105 aaKnown RBP17.02■□□□□ 0.32
ATXN2-218ENST00000549455 ACTN1P12814 892 aa17.02■□□□□ 0.32
ATXN2-218ENST00000549455 EDNRBP24530 442 aa17.02■□□□□ 0.32
ATXN2-218ENST00000549455 MRPL12P52815 198 aaKnown RBP17.02■□□□□ 0.32
ATXN2-218ENST00000549455 DNERQ8NFT8 737 aa17.02■□□□□ 0.32
ATXN2-218ENST00000549455 ADAMTS19Q8TE59 1207 aa17.02■□□□□ 0.32
ATXN2-218ENST00000549455 LNPKQ9C0E8 428 aa17.02■□□□□ 0.32
ATXN2-218ENST00000549455 RNF41Q9H4P4 317 aaPredicted RBP17.02■□□□□ 0.32
ATXN2-218ENST00000549455 NOD1Q9Y239 953 aa17.02■□□□□ 0.32
ATXN2-218ENST00000549455 CHD7Q9P2D1 2997 aa17.02■□□□□ 0.31
ATXN2-218ENST00000549455 TET1Q8NFU7 2136 aa17.02■□□□□ 0.31
ATXN2-218ENST00000549455 PCP11498 1178 aaKnown RBP17.01■□□□□ 0.31
ATXN2-218ENST00000549455 MRPS5P82675 430 aaKnown RBP17.01■□□□□ 0.31
ATXN2-218ENST00000549455 HDAC1Q13547 482 aaPredicted RBP17.01■□□□□ 0.31
ATXN2-218ENST00000549455 GPATCH4Q5T3I0 446 aaKnown RBP17.01■□□□□ 0.31
ATXN2-218ENST00000549455 NFRKBQ6P4R8 1299 aa17.01■□□□□ 0.31
ATXN2-218ENST00000549455 RETREG2Q8NC44 543 aa17.01■□□□□ 0.31
ATXN2-218ENST00000549455 ESR2Q92731 530 aa17.01■□□□□ 0.31
ATXN2-218ENST00000549455 UBA5Q9GZZ9 404 aa17.01■□□□□ 0.31
ATXN2-218ENST00000549455 MYH7BA7E2Y1 1941 aa17■□□□□ 0.31
ATXN2-218ENST00000549455 A6NJR5 290 aa17■□□□□ 0.31
ATXN2-218ENST00000549455 KPNA6O60684 536 aa17■□□□□ 0.31
ATXN2-218ENST00000549455 ARIH2O95376 493 aa17■□□□□ 0.31
ATXN2-218ENST00000549455 CA3P07451 260 aa17■□□□□ 0.31
ATXN2-218ENST00000549455 RFC2P35250 354 aa17■□□□□ 0.31
ATXN2-218ENST00000549455 MFAP1P55081 439 aaKnown RBP17■□□□□ 0.31
ATXN2-218ENST00000549455 CDC37Q16543 378 aaPredicted RBP17■□□□□ 0.31
ATXN2-218ENST00000549455 TMEM67Q5HYA8 995 aa17■□□□□ 0.31
ATXN2-218ENST00000549455 FTOQ9C0B1 505 aaKnown RBP eCLIP17■□□□□ 0.31
ATXN2-218ENST00000549455 TSPYL2Q9H2G4 693 aaPredicted RBP17■□□□□ 0.31
ATXN2-218ENST00000549455 CERS4Q9HA82 394 aa17■□□□□ 0.31
ATXN2-218ENST00000549455 PITPNM1O00562 1244 aa16.99■□□□□ 0.31
ATXN2-218ENST00000549455 ZNF213O14771 459 aa16.99■□□□□ 0.31
ATXN2-218ENST00000549455 IQCF3P0C7M6 154 aa16.99■□□□□ 0.31
ATXN2-218ENST00000549455 PTPN11Q06124 597 aaPredicted RBP16.99■□□□□ 0.31
ATXN2-218ENST00000549455 SKIV2LQ15477 1246 aaKnown RBP16.99■□□□□ 0.31
ATXN2-218ENST00000549455 B4GALNT3Q6L9W6 998 aa16.99■□□□□ 0.31
ATXN2-218ENST00000549455 TICAM2Q86XR7 235 aa16.99■□□□□ 0.31
ATXN2-218ENST00000549455 PNMA1Q8ND90 353 aa16.99■□□□□ 0.31
ATXN2-218ENST00000549455 SLC9A7Q96T83 725 aa16.99■□□□□ 0.31
ATXN2-218ENST00000549455 UHRF1Q96T88 793 aaPredicted RBP16.99■□□□□ 0.31
ATXN2-218ENST00000549455 KAT14Q9H8E8 782 aa16.99■□□□□ 0.31
ATXN2-218ENST00000549455 COL4A4P53420 1690 aaPredicted RBP16.99■□□□□ 0.31
ATXN2-218ENST00000549455 PRRC2BQ5JSZ5 2229 aaKnown RBP16.98■□□□□ 0.31
ATXN2-218ENST00000549455 ABCB11O95342 1321 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 NCOR1O75376 2440 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 RFXAPO00287 272 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 DHX16O60231 1041 aaKnown RBP16.98■□□□□ 0.31
ATXN2-218ENST00000549455 KDM4AO75164 1064 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 SDSP20132 328 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 BFSP2Q13515 415 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 SEPT14Q6ZU15 432 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 DGKHQ86XP1 1220 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 AFG1LQ8WV93 481 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 TBC1D5Q92609 795 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 TAAR1Q96RJ0 339 aa16.98■□□□□ 0.31
ATXN2-218ENST00000549455 GTPBP6O43824 516 aaPredicted RBP16.97■□□□□ 0.31
ATXN2-218ENST00000549455 GH1P01241 217 aa16.97■□□□□ 0.31
ATXN2-218ENST00000549455 MMP3P08254 477 aa16.97■□□□□ 0.31
ATXN2-218ENST00000549455 PTGISQ16647 500 aa16.97■□□□□ 0.31
ATXN2-218ENST00000549455 LY6KQ17RY6 165 aa16.97■□□□□ 0.31
ATXN2-218ENST00000549455 IQCA1Q86XH1 822 aa16.97■□□□□ 0.31
ATXN2-218ENST00000549455 CCDC155Q8N6L0 562 aa16.97■□□□□ 0.31
ATXN2-218ENST00000549455 RGS22Q8NE09 1264 aa16.97■□□□□ 0.31
ATXN2-218ENST00000549455 MUC3AQ02505 3323 aa16.97■□□□□ 0.31
ATXN2-218ENST00000549455 TRANK1O15050 2925 aa16.97■□□□□ 0.31
ATXN2-218ENST00000549455 REV3LO60673 3130 aa16.96■□□□□ 0.31
ATXN2-218ENST00000549455 B4E1Z4 1266 aa16.96■□□□□ 0.31
ATXN2-218ENST00000549455 COL9A1P20849 921 aa16.96■□□□□ 0.31
ATXN2-218ENST00000549455 CCDC178Q5BJE1 867 aa16.96■□□□□ 0.31
ATXN2-218ENST00000549455 CWC27Q6UX04 472 aaKnown RBP16.96■□□□□ 0.31
ATXN2-218ENST00000549455 HERC6Q8IVU3 1022 aa16.96■□□□□ 0.31
ATXN2-218ENST00000549455 ADGRF4Q8IZF3 695 aa16.96■□□□□ 0.31
ATXN2-218ENST00000549455 SYTL5Q8TDW5 730 aaPredicted RBP16.96■□□□□ 0.31
ATXN2-218ENST00000549455 ARNTL2Q8WYA1 636 aa16.96■□□□□ 0.31
ATXN2-218ENST00000549455 COL20A1Q9P218 1284 aa16.96■□□□□ 0.31
ATXN2-218ENST00000549455 EPOPA6NHQ4 379 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 KIF28PB7ZC32 967 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 KCNJ6P48051 423 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 TFF2Q03403 129 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 ARHGAP1Q07960 439 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 STXBP2Q15833 593 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 QRICH1Q2TAL8 776 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 ASPRV1Q53RT3 343 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 GDF6Q6KF10 455 aaPredicted RBP16.95■□□□□ 0.3
ATXN2-218ENST00000549455 CCDC62Q6P9F0 684 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 MCF2L2Q86YR7 1114 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 PHOSPHO2Q8TCD6 241 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 NSUN6Q8TEA1 469 aaKnown RBP16.95■□□□□ 0.3
ATXN2-218ENST00000549455 NECAB3Q96P71 396 aaPredicted RBP16.95■□□□□ 0.3
ATXN2-218ENST00000549455 RMDN3Q96TC7 470 aa16.95■□□□□ 0.3
ATXN2-218ENST00000549455 VAT1LQ9HCJ6 419 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms