RNA–Protein interactions for RNA: ENST00000548824.5

RACGAP1-215, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 586 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-215ENST00000548824 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.15□□□□□ -0.32e-9■□□□□ 10.5
RACGAP1-215ENST00000548824 KATNAL1Q9BW62 490 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 NEDD4P46934 1319 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 A6NJR5 290 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 EDNRBP24530 442 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 DNAJB2P25686 324 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 CYP2C18P33260 490 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 PURAQ00577 322 aaKnown RBP13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 TTC22Q5TAA0 569 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 SLC30A10Q6XR72 485 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 MAFAQ8NHW3 353 aaPredicted RBP13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 GUCD1Q96NT3 240 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 ALDH8A1Q9H2A2 487 aaPredicted RBP13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 ZNF576Q9H609 170 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 SLC28A3Q9HAS3 691 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 SLC4A7Q9Y6M7 1214 aa13.14□□□□□ -0.31
RACGAP1-215ENST00000548824 ASTN1O14525 1302 aa13.13□□□□□ -0.31
RACGAP1-215ENST00000548824 LAMA4Q16363 1823 aa13.13□□□□□ -0.31
RACGAP1-215ENST00000548824 KIF28PB7ZC32 967 aa13.13□□□□□ -0.31
RACGAP1-215ENST00000548824 IFIT3O14879 490 aaKnown RBP13.13□□□□□ -0.31
RACGAP1-215ENST00000548824 LAMC2Q13753 1193 aa13.13□□□□□ -0.31
RACGAP1-215ENST00000548824 DGKDQ16760 1214 aa13.13□□□□□ -0.31
RACGAP1-215ENST00000548824 CATIPQ7Z7H3 387 aa13.13□□□□□ -0.31
RACGAP1-215ENST00000548824 LAMA3Q16787 3333 aa13.13□□□□□ -0.31
RACGAP1-215ENST00000548824 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 ZBTB5O15062 677 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 B4GALT4O60513 344 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 CFBP00751 764 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 TGFB3P10600 412 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 KIF5BP33176 963 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 EPHB4P54760 987 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 WTAPQ15007 396 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 QRICH1Q2TAL8 776 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 CASC1Q6TDU7 716 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 SEPT14Q6ZU15 432 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 DHX37Q8IY37 1157 aaKnown RBP13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 SYTL5Q8TDW5 730 aaPredicted RBP13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 MTA3Q9BTC8 594 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 NOC4LQ9BVI4 516 aaKnown RBP13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 TRPV6Q9H1D0 765 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 PCDHA1Q9Y5I3 950 aa13.12□□□□□ -0.31
RACGAP1-215ENST00000548824 ZBBXA8MT70 800 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 STAM2O75886 525 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 NR3C2P08235 984 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 ACRP10323 421 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 GNAQP50148 359 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 CCL23P55773 120 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 PSMC6P62333 389 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 IRX5P78411 483 aaPredicted RBP13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 GNPTABQ3T906 1256 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 RASGRP2Q7LDG7 609 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 C7orf31Q8N865 590 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 CAGE1Q8TC20 777 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 PHOSPHO2Q8TCD6 241 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 CUL5Q93034 780 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 PURBQ96QR8 312 aaKnown RBP13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 LZTS2Q9BRK4 669 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 FTOQ9C0B1 505 aaKnown RBP eCLIP13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 JMJD4Q9H9V9 463 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 MRVI1Q9Y6F6 885 aa13.11□□□□□ -0.31
RACGAP1-215ENST00000548824 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 GCOM1H8Y6P7 765 aaPredicted RBP13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 PPFIA4O75335 1185 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 POLR2MP0CAP2 368 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 CHMLP26374 656 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 CHMP4BP1P59074 171 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 OTOP2Q7RTS6 562 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 CTCFLQ8NI51 663 aaPredicted RBP13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 MYLIPQ8WY64 445 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 EMID1Q96A84 441 aaPredicted RBP13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 TAAR1Q96RJ0 339 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 MAP3K14Q99558 947 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 TTYH1Q9H313 450 aaPredicted RBP13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 PXMP2Q9NR77 195 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 SEC63Q9UGP8 760 aaKnown RBP13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 PCDHA11Q9Y5I1 949 aa13.1□□□□□ -0.31
RACGAP1-215ENST00000548824 PALM3A6NDB9 673 aaPredicted RBP13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 EFCAB14O75071 495 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 CALM1P0DP23 149 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 CALM2P0DP24 149 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 CALM3P0DP25 149 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 CCND2P30279 289 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 HSD17B4P51659 736 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 PTGISQ16647 500 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 RNF20Q5VTR2 975 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 SYNE3Q6ZMZ3 975 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 C16orf59Q7L2K0 433 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 SESTD1Q86VW0 696 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 IL27Q8NEV9 243 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 PBX4Q9BYU1 374 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 KIAA1217Q5T5P2 1943 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 GRIN2DO15399 1336 aa13.09□□□□□ -0.31
RACGAP1-215ENST00000548824 BAIAP3O94812 1187 aa13.08□□□□□ -0.32
RACGAP1-215ENST00000548824 MYCLP12524 364 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms