RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 A0A1W2PQ64 194 aa17.49■□□□□ 0.39
VAMP1-207ENST00000539047 A0A1W2PQD8 194 aa17.49■□□□□ 0.39
VAMP1-207ENST00000539047 TESPA1A2RU30 521 aaPredicted RBP17.49■□□□□ 0.39
VAMP1-207ENST00000539047 OR52Z1P0C646 297 aa17.49■□□□□ 0.39
VAMP1-207ENST00000539047 HSPA1AP0DMV8 641 aaKnown RBP17.49■□□□□ 0.39
VAMP1-207ENST00000539047 HSPA1BP0DMV9 641 aaKnown RBP17.49■□□□□ 0.39
VAMP1-207ENST00000539047 PTGDRQ13258 359 aa17.49■□□□□ 0.39
VAMP1-207ENST00000539047 TMEM266Q2M3C6 531 aa17.49■□□□□ 0.39
VAMP1-207ENST00000539047 ADALQ6DHV7 355 aa17.49■□□□□ 0.39
VAMP1-207ENST00000539047 PPP4R3AQ6IN85 833 aa17.49■□□□□ 0.39
VAMP1-207ENST00000539047 MRPS27Q92552 414 aaKnown RBP17.49■□□□□ 0.39
VAMP1-207ENST00000539047 MPHOSPH6Q99547 160 aaKnown RBP17.49■□□□□ 0.39
VAMP1-207ENST00000539047 BTBD7Q9P203 1132 aa17.49■□□□□ 0.39
VAMP1-207ENST00000539047 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
VAMP1-207ENST00000539047 PCDHA7Q9UN72 937 aa17.49■□□□□ 0.39
VAMP1-207ENST00000539047 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
VAMP1-207ENST00000539047 TXLNAP40222 546 aa17.48■□□□□ 0.39
VAMP1-207ENST00000539047 PRPHP41219 470 aa17.48■□□□□ 0.39
VAMP1-207ENST00000539047 RPS6P62753 249 aaKnown RBP17.48■□□□□ 0.39
VAMP1-207ENST00000539047 CALCRLQ16602 461 aa17.48■□□□□ 0.39
VAMP1-207ENST00000539047 ANKRD35Q8N283 1001 aa17.48■□□□□ 0.39
VAMP1-207ENST00000539047 GPRC5AQ8NFJ5 357 aa17.48■□□□□ 0.39
VAMP1-207ENST00000539047 RAB34Q9BZG1 259 aa17.48■□□□□ 0.39
VAMP1-207ENST00000539047 MROH8Q9H579 483 aa17.48■□□□□ 0.39
VAMP1-207ENST00000539047 FAM13BQ9NYF5 915 aa17.48■□□□□ 0.39
VAMP1-207ENST00000539047 SRPRBQ9Y5M8 271 aaKnown RBP17.48■□□□□ 0.39
VAMP1-207ENST00000539047 B4DLN1 442 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 CYP2C8P10632 490 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 PTPREP23469 700 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 ERVK-9P63128 1117 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 ERVK-24P63145 666 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 WDR78Q5VTH9 848 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 ARHGEF16Q5VV41 709 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 SLC30A10Q6XR72 485 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 DTHD1Q6ZMT9 781 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 FAM43AQ8N2R8 423 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 FSIP1Q8NA03 581 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 SHCBP1Q8NEM2 672 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 MOV10L1Q9BXT6 1211 aaKnown RBP17.47■□□□□ 0.39
VAMP1-207ENST00000539047 RIPK3Q9Y572 518 aa17.47■□□□□ 0.39
VAMP1-207ENST00000539047 CYP3A4P08684 503 aa17.46■□□□□ 0.39
VAMP1-207ENST00000539047 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-207ENST00000539047 GRM1Q13255 1194 aa17.46■□□□□ 0.39
VAMP1-207ENST00000539047 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-207ENST00000539047 TAF1CQ15572 869 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-207ENST00000539047 REM2Q8IYK8 340 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-207ENST00000539047 ZNF579Q8NAF0 562 aaKnown RBP17.46■□□□□ 0.39
VAMP1-207ENST00000539047 SYTL5Q8TDW5 730 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-207ENST00000539047 FBXO2Q9UK22 296 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-207ENST00000539047 VWA3AA6NCI4 1184 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 CNMDO75829 334 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 TDP2O95551 362 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 ERCC3P19447 782 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 CMA1P23946 247 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 CCND2P30279 289 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
VAMP1-207ENST00000539047 NOGQ13253 232 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 KCTD2Q14681 263 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 XRRA1Q6P2D8 792 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 SLFN12Q8IYM2 578 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 ANKRD13CQ8N6S4 541 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 NSUN6Q8TEA1 469 aaKnown RBP17.45■□□□□ 0.38
VAMP1-207ENST00000539047 TBC1D5Q92609 795 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 CCDC34Q96HJ3 373 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 RMDN3Q96TC7 470 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 PYM1Q9BRP8 204 aaKnown RBP17.45■□□□□ 0.38
VAMP1-207ENST00000539047 A1CFQ9NQ94 594 aaKnown RBP17.45■□□□□ 0.38
VAMP1-207ENST00000539047 DDX19AQ9NUU7 478 aaKnown RBP17.45■□□□□ 0.38
VAMP1-207ENST00000539047 CYP39A1Q9NYL5 469 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 RBPJLQ9UBG7 517 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 ADD3Q9UEY8 706 aaKnown RBP17.45■□□□□ 0.38
VAMP1-207ENST00000539047 IVNS1ABPQ9Y6Y0 642 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 FRMPD4Q14CM0 1322 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 RPTORQ8N122 1335 aa17.45■□□□□ 0.38
VAMP1-207ENST00000539047 PLXNA1Q9UIW2 1896 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 CYP3A7-CYP3A51PA0A087WV96 503 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 WNT7AO00755 349 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 KINO60870 393 aaKnown RBP17.44■□□□□ 0.38
VAMP1-207ENST00000539047 FCER1AP12319 257 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 CYP3A7P24462 503 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 CIITAP33076 1130 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 VEGFBP49765 207 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 FAM160A1Q05DH4 1040 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 FAM110CQ1W6H9 321 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 PCNX4Q63HM2 1172 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.44■□□□□ 0.38
VAMP1-207ENST00000539047 IFNL1Q8IU54 200 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 GPT2Q8TD30 523 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 MMP19Q99542 508 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 ZFYVE28Q9HCC9 887 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 MORF4L1Q9UBU8 362 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 LCTP09848 1927 aa17.44■□□□□ 0.38
VAMP1-207ENST00000539047 ZNFX1Q9P2E3 1918 aaKnown RBP17.43■□□□□ 0.38
VAMP1-207ENST00000539047 FAM155AB1AL88 458 aaPredicted RBP17.43■□□□□ 0.38
VAMP1-207ENST00000539047 POTEB2H3BUK9 544 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 TBX3O15119 743 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 ALDH1A1P00352 501 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 EIF2AK2P19525 551 aaKnown RBP17.43■□□□□ 0.38
VAMP1-207ENST00000539047 DEFB115Q30KQ5 88 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 Q4G0T1 1027 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms