RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 ASTN1O14525 1302 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 SMCHD1A6NHR9 2005 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 SEPT4O43236 478 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 EIF3JO75822 258 aaKnown RBP14.21□□□□□ -0.13
CCS-202ENST00000525435 ZNF865P0CJ78 1059 aaPredicted RBP14.21□□□□□ -0.13
CCS-202ENST00000525435 HOXA13P31271 388 aaPredicted RBP14.21□□□□□ -0.13
CCS-202ENST00000525435 ADCY7P51828 1080 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 HMGN5P82970 282 aaKnown RBP14.21□□□□□ -0.13
CCS-202ENST00000525435 PDE4DQ08499 809 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 ACVR2BQ13705 512 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 MTFR1Q15390 333 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 STXBP2Q15833 593 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 ARHGEF16Q5VV41 709 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 IQSEC1Q6DN90 963 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 TYW1BQ6NUM6 668 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 NSUN7Q8NE18 718 aaKnown RBP14.21□□□□□ -0.13
CCS-202ENST00000525435 PURBQ96QR8 312 aaKnown RBP14.21□□□□□ -0.13
CCS-202ENST00000525435 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCS-202ENST00000525435 UNC93B1Q9H1C4 597 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 PXMP2Q9NR77 195 aa14.21□□□□□ -0.13
CCS-202ENST00000525435 ORC3Q9UBD5 711 aaPredicted RBP14.21□□□□□ -0.13
CCS-202ENST00000525435 ZNFX1Q9P2E3 1918 aaKnown RBP14.2□□□□□ -0.14
CCS-202ENST00000525435 SPDYE3A6NKU9 549 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 STAM2O75886 525 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 NR3C2P08235 984 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 GJA8P48165 433 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 AP3B2Q13367 1082 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 PRAMEF19Q5SWL8 479 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 USP17L6PQ6QN14 398 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 VSIG10LQ86VR7 867 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 FCHSD1Q86WN1 690 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 TRPV1Q8NER1 839 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 TMX3Q96JJ7 454 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 PDCD2LQ9BRP1 358 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 KATNBL1Q9H079 304 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 EHMT1Q9H9B1 1298 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 FAM184BQ9ULE4 1060 aa14.2□□□□□ -0.14
CCS-202ENST00000525435 FRMPD4Q14CM0 1322 aa14.19□□□□□ -0.14
CCS-202ENST00000525435 RBM47A0AV96 593 aaKnown RBP14.19□□□□□ -0.14
CCS-202ENST00000525435 CCDC85CA6NKD9 419 aa14.19□□□□□ -0.14
CCS-202ENST00000525435 SGPL1O95470 568 aa14.19□□□□□ -0.14
CCS-202ENST00000525435 FDPSP14324 419 aaKnown RBP14.19□□□□□ -0.14
CCS-202ENST00000525435 AKR1A1P14550 325 aa14.19□□□□□ -0.14
CCS-202ENST00000525435 CCND3P30281 292 aaPredicted RBP14.19□□□□□ -0.14
CCS-202ENST00000525435 CLK2P49760 499 aaKnown RBP14.19□□□□□ -0.14
CCS-202ENST00000525435 RGS19P49795 217 aa14.19□□□□□ -0.14
CCS-202ENST00000525435 NLRP5P59047 1200 aa14.19□□□□□ -0.14
CCS-202ENST00000525435 CCDC83Q8IWF9 413 aa14.19□□□□□ -0.14
CCS-202ENST00000525435 SNX21Q969T3 373 aa14.19□□□□□ -0.14
CCS-202ENST00000525435 CRISPLD2Q9H0B8 497 aa14.19□□□□□ -0.14
CCS-202ENST00000525435 DDX20Q9UHI6 824 aaKnown RBP14.19□□□□□ -0.14
CCS-202ENST00000525435 PPFIA3O75145 1194 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 CD2BP2O95400 341 aaKnown RBP14.18□□□□□ -0.14
CCS-202ENST00000525435 TGFB3P10600 412 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 CNGA1P29973 690 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 CCND2P30279 289 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 ST3GAL1Q11201 340 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 PGM5Q15124 567 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 PCNX4Q63HM2 1172 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 LHX8Q68G74 356 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 TAPT1Q6NXT6 567 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 KCNV1Q6PIU1 500 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 REXO1Q8N1G1 1221 aaKnown RBP14.18□□□□□ -0.14
CCS-202ENST00000525435 DAGLBQ8NCG7 672 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 U2AF1L4Q8WU68 220 aaKnown RBP14.18□□□□□ -0.14
CCS-202ENST00000525435 SCFD2Q8WU76 684 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 DEFB118Q96PH6 123 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 ALG1Q9BT22 464 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 VPS54Q9P1Q0 977 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 PCDHA6Q9UN73 950 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 PCDHA4Q9UN74 947 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 Q9Y3F1 56 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 KIF3AQ9Y496 699 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 PCDHA8Q9Y5H6 950 aa14.18□□□□□ -0.14
CCS-202ENST00000525435 KIAA0100Q14667 2235 aaKnown RBP14.17□□□□□ -0.14
CCS-202ENST00000525435 MAFGO15525 162 aa14.17□□□□□ -0.14
CCS-202ENST00000525435 DUSP11O75319 330 aaKnown RBP14.17□□□□□ -0.14
CCS-202ENST00000525435 RARBP10826 455 aa14.17□□□□□ -0.14
CCS-202ENST00000525435 EIF2AK2P19525 551 aaKnown RBP14.17□□□□□ -0.14
CCS-202ENST00000525435 CCDC144BQ3MJ40 725 aa14.17□□□□□ -0.14
CCS-202ENST00000525435 ANKLE1Q8NAG6 615 aa14.17□□□□□ -0.14
CCS-202ENST00000525435 ARRDC4Q8NCT1 418 aa14.17□□□□□ -0.14
CCS-202ENST00000525435 PHF20Q9BVI0 1012 aa14.17□□□□□ -0.14
CCS-202ENST00000525435 ZHX1Q9UKY1 873 aaPredicted RBP14.17□□□□□ -0.14
CCS-202ENST00000525435 OGDHLQ9ULD0 1010 aa14.17□□□□□ -0.14
CCS-202ENST00000525435 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.17□□□□□ -0.14
CCS-202ENST00000525435 MYH6P13533 1939 aa14.16□□□□□ -0.14
CCS-202ENST00000525435 NKRFO15226 690 aaKnown RBP eCLIP14.16□□□□□ -0.14
CCS-202ENST00000525435 JAK2O60674 1132 aa14.16□□□□□ -0.14
CCS-202ENST00000525435 MYCP01106 439 aaPredicted RBP14.16□□□□□ -0.14
CCS-202ENST00000525435 TFRCP02786 760 aaKnown RBP14.16□□□□□ -0.14
CCS-202ENST00000525435 NKX3-2P78367 333 aa14.16□□□□□ -0.14
CCS-202ENST00000525435 TNFAIP2Q03169 654 aa14.16□□□□□ -0.14
CCS-202ENST00000525435 TTLL4Q14679 1199 aa14.16□□□□□ -0.14
CCS-202ENST00000525435 UBE2SQ16763 222 aa14.16□□□□□ -0.14
CCS-202ENST00000525435 GNPTABQ3T906 1256 aa14.16□□□□□ -0.14
CCS-202ENST00000525435 AIFM3Q96NN9 605 aa14.16□□□□□ -0.14
CCS-202ENST00000525435 CENPFP49454 3210 aa14.16□□□□□ -0.14
CCS-202ENST00000525435 CYP3A4P08684 503 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 MYCLP12524 364 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms