RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 MSL3Q8N5Y2 521 aaKnown RBP17.31■□□□□ 0.36
PDCD6-211ENST00000515587 DNERQ8NFT8 737 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 BICD2Q8TD16 824 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 SYTL5Q8TDW5 730 aaPredicted RBP17.31■□□□□ 0.36
PDCD6-211ENST00000515587 TBC1D5Q92609 795 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 SHISA4Q96DD7 197 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 ALG1Q9BT22 464 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 RIC8AQ9NPQ8 531 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 VPS54Q9P1Q0 977 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 MCM3APO60318 1980 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 LOC102724159A0A0B4J2E5 919 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 ESYT2A0FGR8 921 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 ASB14A6NK59 587 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 PIK3CDO00329 1044 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 HMGCRP04035 888 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 HOXA13P31271 388 aaPredicted RBP17.3■□□□□ 0.36
PDCD6-211ENST00000515587 NLRP5P59047 1200 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 UBXN2AP68543 259 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 PWP2Q15269 919 aaKnown RBP17.3■□□□□ 0.36
PDCD6-211ENST00000515587 CCL14Q16627 93 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 ARHGEF16Q5VV41 709 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 MCTP2Q6DN12 878 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 FCHSD1Q86WN1 690 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 NSUN6Q8TEA1 469 aaKnown RBP17.3■□□□□ 0.36
PDCD6-211ENST00000515587 TRIB2Q92519 343 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 RMDN3Q96TC7 470 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 EHMT1Q9H9B1 1298 aa17.3■□□□□ 0.36
PDCD6-211ENST00000515587 SOWAHBA6NEL2 793 aa17.29■□□□□ 0.36
PDCD6-211ENST00000515587 SPDYE3A6NKU9 549 aa17.29■□□□□ 0.36
PDCD6-211ENST00000515587 ALDH5A1P51649 535 aaPredicted RBP17.29■□□□□ 0.36
PDCD6-211ENST00000515587 TYW1BQ6NUM6 668 aa17.29■□□□□ 0.36
PDCD6-211ENST00000515587 USP17L6PQ6QN14 398 aa17.29■□□□□ 0.36
PDCD6-211ENST00000515587 TINF2Q9BSI4 451 aa17.29■□□□□ 0.36
PDCD6-211ENST00000515587 ZMYND12Q9H0C1 365 aa17.29■□□□□ 0.36
PDCD6-211ENST00000515587 SMC3Q9UQE7 1217 aa17.29■□□□□ 0.36
PDCD6-211ENST00000515587 SYNGAP1Q96PV0 1343 aa17.28■□□□□ 0.36
PDCD6-211ENST00000515587 MEIS2O14770 477 aa17.28■□□□□ 0.36
PDCD6-211ENST00000515587 DTNBO60941 627 aa17.28■□□□□ 0.36
PDCD6-211ENST00000515587 FOSP01100 380 aaPredicted RBP17.28■□□□□ 0.36
PDCD6-211ENST00000515587 FDPSP14324 419 aaKnown RBP17.28■□□□□ 0.36
PDCD6-211ENST00000515587 UBE2SQ16763 222 aa17.28■□□□□ 0.36
PDCD6-211ENST00000515587 GALNT17Q6IS24 598 aa17.28■□□□□ 0.36
PDCD6-211ENST00000515587 AIFM3Q96NN9 605 aa17.28■□□□□ 0.36
PDCD6-211ENST00000515587 TAAR1Q96RJ0 339 aa17.28■□□□□ 0.36
PDCD6-211ENST00000515587 FLRT1Q9NZU1 646 aa17.28■□□□□ 0.36
PDCD6-211ENST00000515587 CNPY2Q9Y2B0 182 aa17.28■□□□□ 0.36
PDCD6-211ENST00000515587 LAMA3Q16787 3333 aa17.27■□□□□ 0.36
PDCD6-211ENST00000515587 INHAP05111 366 aa17.27■□□□□ 0.36
PDCD6-211ENST00000515587 HSP90AA1P07900 732 aaKnown RBP17.27■□□□□ 0.36
PDCD6-211ENST00000515587 PDE4DQ08499 809 aa17.27■□□□□ 0.36
PDCD6-211ENST00000515587 CUL4AQ13619 759 aa17.27■□□□□ 0.36
PDCD6-211ENST00000515587 MAMDC4Q6UXC1 1216 aa17.27■□□□□ 0.36
PDCD6-211ENST00000515587 REXO1Q8N1G1 1221 aaKnown RBP17.27■□□□□ 0.36
PDCD6-211ENST00000515587 PURBQ96QR8 312 aaKnown RBP17.27■□□□□ 0.36
PDCD6-211ENST00000515587 IWS1Q96ST2 819 aa17.27■□□□□ 0.36
PDCD6-211ENST00000515587 BRMS1Q9HCU9 246 aa17.27■□□□□ 0.36
PDCD6-211ENST00000515587 PXMP2Q9NR77 195 aa17.27■□□□□ 0.36
PDCD6-211ENST00000515587 COL20A1Q9P218 1284 aa17.27■□□□□ 0.36
PDCD6-211ENST00000515587 EIF2AK2P19525 551 aaKnown RBP17.26■□□□□ 0.35
PDCD6-211ENST00000515587 CYP2C19P33261 490 aa17.26■□□□□ 0.35
PDCD6-211ENST00000515587 AP3B2Q13367 1082 aa17.26■□□□□ 0.35
PDCD6-211ENST00000515587 BECN1Q14457 450 aa17.26■□□□□ 0.35
PDCD6-211ENST00000515587 MTFR1Q15390 333 aa17.26■□□□□ 0.35
PDCD6-211ENST00000515587 ARMCX2Q7L311 632 aa17.26■□□□□ 0.35
PDCD6-211ENST00000515587 C8orf76Q96K31 380 aa17.26■□□□□ 0.35
PDCD6-211ENST00000515587 FGD4Q96M96 766 aa17.26■□□□□ 0.35
PDCD6-211ENST00000515587 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.26■□□□□ 0.35
PDCD6-211ENST00000515587 PCDHA4Q9UN74 947 aa17.26■□□□□ 0.35
PDCD6-211ENST00000515587 PRKAR2AP13861 404 aaKnown RBP17.25■□□□□ 0.35
PDCD6-211ENST00000515587 GJB2P29033 226 aa17.25■□□□□ 0.35
PDCD6-211ENST00000515587 FOSBP53539 338 aa17.25■□□□□ 0.35
PDCD6-211ENST00000515587 SAFBQ15424 915 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDCD6-211ENST00000515587 BLIDQ8IZY5 108 aa17.25■□□□□ 0.35
PDCD6-211ENST00000515587 DAGLBQ8NCG7 672 aa17.25■□□□□ 0.35
PDCD6-211ENST00000515587 INTS4Q96HW7 963 aaKnown RBP17.25■□□□□ 0.35
PDCD6-211ENST00000515587 PHF20Q9BVI0 1012 aa17.25■□□□□ 0.35
PDCD6-211ENST00000515587 COL25A1Q9BXS0 654 aaPredicted RBP17.25■□□□□ 0.35
PDCD6-211ENST00000515587 NRBP1Q9UHY1 535 aa17.25■□□□□ 0.35
PDCD6-211ENST00000515587 PCDHA6Q9UN73 950 aa17.25■□□□□ 0.35
PDCD6-211ENST00000515587 KCNJ14Q9UNX9 436 aa17.25■□□□□ 0.35
PDCD6-211ENST00000515587 PCDHA8Q9Y5H6 950 aa17.25■□□□□ 0.35
PDCD6-211ENST00000515587 LRRC37A2A6NM11 1700 aa17.24■□□□□ 0.35
PDCD6-211ENST00000515587 ASTN1O14525 1302 aa17.24■□□□□ 0.35
PDCD6-211ENST00000515587 KIAA1217Q5T5P2 1943 aa17.24■□□□□ 0.35
PDCD6-211ENST00000515587 NR3C2P08235 984 aa17.24■□□□□ 0.35
PDCD6-211ENST00000515587 CCND2P30279 289 aa17.24■□□□□ 0.35
PDCD6-211ENST00000515587 CACNB2Q08289 660 aaPredicted RBP17.24■□□□□ 0.35
PDCD6-211ENST00000515587 STXBP2Q15833 593 aa17.24■□□□□ 0.35
PDCD6-211ENST00000515587 JAKMIP3Q5VZ66 844 aa17.24■□□□□ 0.35
PDCD6-211ENST00000515587 UBE2Q1Q7Z7E8 422 aa17.24■□□□□ 0.35
PDCD6-211ENST00000515587 MORC4Q8TE76 937 aa17.24■□□□□ 0.35
PDCD6-211ENST00000515587 PDCD2LQ9BRP1 358 aa17.24■□□□□ 0.35
PDCD6-211ENST00000515587 ABHD16BQ9H3Z7 469 aa17.24■□□□□ 0.35
PDCD6-211ENST00000515587 HMX1Q9NP08 348 aaPredicted RBP17.24■□□□□ 0.35
PDCD6-211ENST00000515587 FRMPD4Q14CM0 1322 aa17.23■□□□□ 0.35
PDCD6-211ENST00000515587 IGHA2P01877 340 aa17.23■□□□□ 0.35
PDCD6-211ENST00000515587 MYCLP12524 364 aaPredicted RBP17.23■□□□□ 0.35
PDCD6-211ENST00000515587 EDNRBP24530 442 aa17.23■□□□□ 0.35
PDCD6-211ENST00000515587 CNGA1P29973 690 aa17.23■□□□□ 0.35
PDCD6-211ENST00000515587 KRT2P35908 639 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 635.1 ms