RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TOMM22Q9NS69 142 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 RAD50Q92878 1312 aa17.32■□□□□ 0.36
TRAF4-212ENST00000498540 SALL3Q9BXA9 1300 aa17.32■□□□□ 0.36
TRAF4-212ENST00000498540 A6NJR5 290 aa17.32■□□□□ 0.36
TRAF4-212ENST00000498540 PDHBP11177 359 aa17.32■□□□□ 0.36
TRAF4-212ENST00000498540 TOP1P11387 765 aaKnown RBP17.32■□□□□ 0.36
TRAF4-212ENST00000498540 RPS6P62753 249 aaKnown RBP17.32■□□□□ 0.36
TRAF4-212ENST00000498540 BRDTQ58F21 947 aaPredicted RBP17.32■□□□□ 0.36
TRAF4-212ENST00000498540 RRP12Q5JTH9 1297 aaKnown RBP17.32■□□□□ 0.36
TRAF4-212ENST00000498540 HERC6Q8IVU3 1022 aa17.32■□□□□ 0.36
TRAF4-212ENST00000498540 PHOSPHO2Q8TCD6 241 aa17.32■□□□□ 0.36
TRAF4-212ENST00000498540 SCFD2Q8WU76 684 aa17.32■□□□□ 0.36
TRAF4-212ENST00000498540 FTOQ9C0B1 505 aaKnown RBP eCLIP17.32■□□□□ 0.36
TRAF4-212ENST00000498540 PCDHB15Q9Y5E8 787 aa17.32■□□□□ 0.36
TRAF4-212ENST00000498540 NKRFO15226 690 aaKnown RBP eCLIP17.31■□□□□ 0.362e-7■■□□□ 11.4
TRAF4-212ENST00000498540 ARIH2O95376 493 aa17.31■□□□□ 0.36
TRAF4-212ENST00000498540 RETREG2Q8NC44 543 aa17.31■□□□□ 0.36
TRAF4-212ENST00000498540 KPNA6O60684 536 aa17.3■□□□□ 0.36
TRAF4-212ENST00000498540 TXNP10599 105 aaKnown RBP17.3■□□□□ 0.36
TRAF4-212ENST00000498540 CHMP4BP1P59074 171 aa17.3■□□□□ 0.36
TRAF4-212ENST00000498540 PTPN11Q06124 597 aaPredicted RBP17.3■□□□□ 0.36
TRAF4-212ENST00000498540 ALX1Q15699 326 aa17.3■□□□□ 0.36
TRAF4-212ENST00000498540 CTAGE1Q96RT6 745 aa17.3■□□□□ 0.36
TRAF4-212ENST00000498540 C1QTNF1Q9BXJ1 281 aa17.3■□□□□ 0.36
TRAF4-212ENST00000498540 WDR19Q8NEZ3 1342 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 RBAK-RBAKDNI3L0D1 243 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 LPXNO60711 386 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 FGAP02671 866 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 ZNF543Q08ER8 600 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 GRB10Q13322 594 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 BFSP2Q13515 415 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 TMCO2Q7Z6W1 182 aaPredicted RBP17.29■□□□□ 0.36
TRAF4-212ENST00000498540 DNERQ8NFT8 737 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 FAM122AQ96E09 287 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 MPHOSPH6Q99547 160 aaKnown RBP17.29■□□□□ 0.36
TRAF4-212ENST00000498540 TCP11L1Q9NUJ3 509 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 COG5Q9UP83 839 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 NOD1Q9Y239 953 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 KIAA1217Q5T5P2 1943 aa17.29■□□□□ 0.36
TRAF4-212ENST00000498540 A0A0D9SFI3 127 aa17.28■□□□□ 0.36
TRAF4-212ENST00000498540 LCHNA4D1U4 455 aa17.28■□□□□ 0.36
TRAF4-212ENST00000498540 KIF28PB7ZC32 967 aa17.28■□□□□ 0.36
TRAF4-212ENST00000498540 BAIAP3O94812 1187 aa17.28■□□□□ 0.36
TRAF4-212ENST00000498540 GPNMBQ14956 572 aa17.28■□□□□ 0.36
TRAF4-212ENST00000498540 PTGISQ16647 500 aa17.28■□□□□ 0.36
TRAF4-212ENST00000498540 FAM227BQ96M60 508 aa17.28■□□□□ 0.36
TRAF4-212ENST00000498540 EPHX3Q9H6B9 360 aa17.28■□□□□ 0.36
TRAF4-212ENST00000498540 HELLSQ9NRZ9 838 aa17.28■□□□□ 0.36
TRAF4-212ENST00000498540 TLL1O43897 1013 aa17.27■□□□□ 0.36
TRAF4-212ENST00000498540 MMP3P08254 477 aa17.27■□□□□ 0.36
TRAF4-212ENST00000498540 SNHG28P0DPA3 235 aa17.27■□□□□ 0.36
TRAF4-212ENST00000498540 KCNJ6P48051 423 aa17.27■□□□□ 0.36
TRAF4-212ENST00000498540 HAND2P61296 217 aa17.27■□□□□ 0.36
TRAF4-212ENST00000498540 WDR5P61964 334 aaKnown RBP17.27■□□□□ 0.36
TRAF4-212ENST00000498540 USH1GQ495M9 461 aa17.27■□□□□ 0.36
TRAF4-212ENST00000498540 GDF6Q6KF10 455 aaPredicted RBP17.27■□□□□ 0.36
TRAF4-212ENST00000498540 CCDC62Q6P9F0 684 aa17.27■□□□□ 0.36
TRAF4-212ENST00000498540 AFG1LQ8WV93 481 aa17.27■□□□□ 0.36
TRAF4-212ENST00000498540 DHX38Q92620 1227 aaKnown RBP17.27■□□□□ 0.36
TRAF4-212ENST00000498540 EVI5LQ96CN4 794 aa17.27■□□□□ 0.36
TRAF4-212ENST00000498540 CPVLQ9H3G5 476 aa17.27■□□□□ 0.36
TRAF4-212ENST00000498540 PNMA2Q9UL42 364 aa17.27■□□□□ 0.36
TRAF4-212ENST00000498540 BRWD1Q9NSI6 2320 aa17.26■□□□□ 0.35
TRAF4-212ENST00000498540 GOLGA8HP0CJ92 632 aa17.26■□□□□ 0.35
TRAF4-212ENST00000498540 DEFB103AP81534 67 aa17.26■□□□□ 0.35
TRAF4-212ENST00000498540 ZNF589Q86UQ0 364 aaPredicted RBP17.26■□□□□ 0.35
TRAF4-212ENST00000498540 CAGE1Q8TC20 777 aa17.26■□□□□ 0.35
TRAF4-212ENST00000498540 AFAP1L1Q8TED9 768 aa17.26■□□□□ 0.35
TRAF4-212ENST00000498540 GDPD5Q8WTR4 605 aa17.26■□□□□ 0.35
TRAF4-212ENST00000498540 KAT2BQ92831 832 aa17.26■□□□□ 0.35
TRAF4-212ENST00000498540 HLA-CQ95604 372 aa17.26■□□□□ 0.35
TRAF4-212ENST00000498540 ZMYM6O95789 1325 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 B4DLN1 442 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 HSPD1P10809 573 aaKnown RBP17.25■□□□□ 0.35
TRAF4-212ENST00000498540 MRPL12P52815 198 aaKnown RBP17.25■□□□□ 0.35
TRAF4-212ENST00000498540 ARHGAP1Q07960 439 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 LY6KQ17RY6 165 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 TCTN1Q2MV58 587 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 SEPT14Q6ZU15 432 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 LRRC8DQ7L1W4 858 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 SESTD1Q86VW0 696 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 TBC1D10CQ8IV04 446 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 CCDC155Q8N6L0 562 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 TBC1D5Q92609 795 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 KHSRPQ92945 711 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRAF4-212ENST00000498540 LRFN3Q9BTN0 628 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 COL20A1Q9P218 1284 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 SIP14410 1827 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 MYH6P13533 1939 aa17.25■□□□□ 0.35
TRAF4-212ENST00000498540 LAMA4Q16363 1823 aa17.24■□□□□ 0.35
TRAF4-212ENST00000498540 GH1P01241 217 aa17.24■□□□□ 0.35
TRAF4-212ENST00000498540 SELPP16109 830 aa17.24■□□□□ 0.35
TRAF4-212ENST00000498540 MCMDC2Q4G0Z9 681 aa17.24■□□□□ 0.35
TRAF4-212ENST00000498540 CHST3Q7LGC8 479 aa17.24■□□□□ 0.35
TRAF4-212ENST00000498540 RGS22Q8NE09 1264 aa17.24■□□□□ 0.35
TRAF4-212ENST00000498540 TTC14Q96N46 770 aa17.24■□□□□ 0.35
TRAF4-212ENST00000498540 TAAR1Q96RJ0 339 aa17.24■□□□□ 0.35
TRAF4-212ENST00000498540 UBA5Q9GZZ9 404 aa17.24■□□□□ 0.35
TRAF4-212ENST00000498540 NEDD4P46934 1319 aa17.23■□□□□ 0.35
TRAF4-212ENST00000498540 NBNO60934 754 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms