RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 HMGB1P09429 215 aaKnown RBP15.74■□□□□ 0.11
IRF1-210ENST00000493208 GNPTABQ3T906 1256 aa15.74■□□□□ 0.11
IRF1-210ENST00000493208 FAM109BQ6ICB4 259 aaPredicted RBP15.74■□□□□ 0.11
IRF1-210ENST00000493208 MFSD5Q6N075 450 aa15.74■□□□□ 0.11
IRF1-210ENST00000493208 RPUSD2Q8IZ73 545 aaKnown RBP15.74■□□□□ 0.11
IRF1-210ENST00000493208 DEFB123Q8N688 67 aa15.74■□□□□ 0.11
IRF1-210ENST00000493208 SYTL5Q8TDW5 730 aaPredicted RBP15.74■□□□□ 0.11
IRF1-210ENST00000493208 TRIM43Q96BQ3 446 aaPredicted RBP15.74■□□□□ 0.11
IRF1-210ENST00000493208 IL25Q9H293 177 aa15.74■□□□□ 0.11
IRF1-210ENST00000493208 PDGFCQ9NRA1 345 aa15.74■□□□□ 0.11
IRF1-210ENST00000493208 NOD1Q9Y239 953 aa15.74■□□□□ 0.11
IRF1-210ENST00000493208 SLC12A7Q9Y666 1083 aa15.74■□□□□ 0.11
IRF1-210ENST00000493208 ADCY6O43306 1168 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 PRC1O43663 620 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 STAM2O75886 525 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 MYL3P08590 195 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 CASTP20810 708 aaKnown RBP15.73■□□□□ 0.11
IRF1-210ENST00000493208 LIFRP42702 1097 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 SMAD3P84022 425 aaKnown RBP15.73■□□□□ 0.11
IRF1-210ENST00000493208 PTPN11Q06124 597 aaPredicted RBP15.73■□□□□ 0.11
IRF1-210ENST00000493208 FAM126BQ8IXS8 530 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 MB21D2Q8IYB1 491 aaPredicted RBP15.73■□□□□ 0.11
IRF1-210ENST00000493208 CCDC155Q8N6L0 562 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 KATNAL1Q9BW62 490 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 CPVLQ9H3G5 476 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 RIOX1Q9H6W3 641 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 TBX21Q9UL17 535 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 MRVI1Q9Y6F6 885 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 SMCHD1A6NHR9 2005 aa15.73■□□□□ 0.11
IRF1-210ENST00000493208 ASTN1O14525 1302 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 TMEM265A0A087WTH1 108 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 CCND2P30279 289 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 HSD17B4P51659 736 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 FGD1P98174 961 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 TROAPQ12815 778 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 LAMC2Q13753 1193 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 NFRKBQ6P4R8 1299 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 SEPT14Q6ZU15 432 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 SH3RF1Q7Z6J0 888 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 ZNF654Q8IZM8 581 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 STAG2Q8N3U4 1231 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 MTMR8Q96EF0 704 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 LRCH3Q96II8 777 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 HIPK3Q9H422 1215 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 PXMP2Q9NR77 195 aa15.72■□□□□ 0.11
IRF1-210ENST00000493208 A6NJR5 290 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 SLC27A2O14975 620 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 NR3C2P08235 984 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 PFKMP08237 780 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 TGFB3P10600 412 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 EIF2AK2P19525 551 aaKnown RBP15.71■□□□□ 0.11
IRF1-210ENST00000493208 GHRHRQ02643 423 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 SHHQ15465 462 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 DGKDQ16760 1214 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 FAM47CQ5HY64 1035 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 CREB3L3Q68CJ9 461 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 TEX2Q8IWB9 1127 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 SLC43A3Q8NBI5 491 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 PURBQ96QR8 312 aaKnown RBP15.71■□□□□ 0.11
IRF1-210ENST00000493208 TAAR1Q96RJ0 339 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 PIGSQ96S52 555 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 SPZ1Q9BXG8 430 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 LSG1Q9H089 658 aaKnown RBP15.71■□□□□ 0.11
IRF1-210ENST00000493208 EHMT1Q9H9B1 1298 aa15.71■□□□□ 0.11
IRF1-210ENST00000493208 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.7■□□□□ 0.1
IRF1-210ENST00000493208 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.7■□□□□ 0.1
IRF1-210ENST00000493208 SOX1O00570 391 aaPredicted RBP15.7■□□□□ 0.1
IRF1-210ENST00000493208 CTAGE5O15320 804 aa15.7■□□□□ 0.1
IRF1-210ENST00000493208 PURAQ00577 322 aaKnown RBP15.7■□□□□ 0.1
IRF1-210ENST00000493208 BFSP2Q13515 415 aa15.7■□□□□ 0.1
IRF1-210ENST00000493208 STOX1Q6ZVD7 989 aa15.7■□□□□ 0.1
IRF1-210ENST00000493208 CHST3Q7LGC8 479 aa15.7■□□□□ 0.1
IRF1-210ENST00000493208 RETREG2Q8NC44 543 aa15.7■□□□□ 0.1
IRF1-210ENST00000493208 SMARCC2Q8TAQ2 1214 aa15.7■□□□□ 0.1
IRF1-210ENST00000493208 IGDCC4Q8TDY8 1250 aa15.7■□□□□ 0.1
IRF1-210ENST00000493208 RBM28Q9NW13 759 aaKnown RBP15.7■□□□□ 0.1
IRF1-210ENST00000493208 REC8O95072 547 aa15.69■□□□□ 0.1
IRF1-210ENST00000493208 CD4P01730 458 aa15.69■□□□□ 0.1
IRF1-210ENST00000493208 MYCLP12524 364 aaPredicted RBP15.69■□□□□ 0.1
IRF1-210ENST00000493208 NECTIN1Q15223 517 aa15.69■□□□□ 0.1
IRF1-210ENST00000493208 XRRA1Q6P2D8 792 aa15.69■□□□□ 0.1
IRF1-210ENST00000493208 DHX37Q8IY37 1157 aaKnown RBP15.69■□□□□ 0.1
IRF1-210ENST00000493208 EMID1Q96A84 441 aaPredicted RBP15.69■□□□□ 0.1
IRF1-210ENST00000493208 NEK1Q96PY6 1258 aa15.69■□□□□ 0.1
IRF1-210ENST00000493208 PPP1R12CQ9BZL4 782 aa15.69■□□□□ 0.1
IRF1-210ENST00000493208 ALDH8A1Q9H2A2 487 aaPredicted RBP15.69■□□□□ 0.1
IRF1-210ENST00000493208 LY9Q9HBG7 655 aa15.69■□□□□ 0.1
IRF1-210ENST00000493208 RANBP2P49792 3224 aaKnown RBP15.69■□□□□ 0.1
IRF1-210ENST00000493208 MCM3APO60318 1980 aa15.68■□□□□ 0.1
IRF1-210ENST00000493208 SH2B2O14492 632 aaPredicted RBP15.68■□□□□ 0.1
IRF1-210ENST00000493208 EIF5BO60841 1220 aaKnown RBP15.68■□□□□ 0.1
IRF1-210ENST00000493208 PARNO95453 639 aaKnown RBP15.68■□□□□ 0.1
IRF1-210ENST00000493208 ACTN1P12814 892 aa15.68■□□□□ 0.1
IRF1-210ENST00000493208 RFC2P35250 354 aa15.68■□□□□ 0.1
IRF1-210ENST00000493208 GIMAP8Q8ND71 665 aaPredicted RBP15.68■□□□□ 0.1
IRF1-210ENST00000493208 CDHR1Q96JP9 859 aa15.68■□□□□ 0.1
IRF1-210ENST00000493208 PDCD2LQ9BRP1 358 aa15.68■□□□□ 0.1
IRF1-210ENST00000493208 STXBP5LQ9Y2K9 1186 aa15.68■□□□□ 0.1
IRF1-210ENST00000493208 LRRC37A2A6NM11 1700 aa15.68■□□□□ 0.1
IRF1-210ENST00000493208 LTBP2Q14767 1821 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms