RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 TMCO2Q7Z6W1 182 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-228ENST00000487354 CD320Q9NPF0 282 aa18.16■□□□□ 0.5
MCF2L-228ENST00000487354 ADD3Q9UEY8 706 aaKnown RBP18.16■□□□□ 0.5
MCF2L-228ENST00000487354 ANAPC4Q9UJX5 808 aa18.16■□□□□ 0.5
MCF2L-228ENST00000487354 TTC41PQ6P2S7 1318 aa18.16■□□□□ 0.5
MCF2L-228ENST00000487354 ACTN1P12814 892 aa18.15■□□□□ 0.5
MCF2L-228ENST00000487354 CCDC96Q2M329 555 aa18.15■□□□□ 0.5
MCF2L-228ENST00000487354 FAM47CQ5HY64 1035 aa18.15■□□□□ 0.5
MCF2L-228ENST00000487354 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
MCF2L-228ENST00000487354 DHX38Q92620 1227 aaKnown RBP18.15■□□□□ 0.5
MCF2L-228ENST00000487354 ARIH1Q9Y4X5 557 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-228ENST00000487354 FRMPD2Q68DX3 1309 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-228ENST00000487354 ATG2AQ2TAZ0 1938 aa18.15■□□□□ 0.5
MCF2L-228ENST00000487354 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
MCF2L-228ENST00000487354 MYH6P13533 1939 aa18.14■□□□□ 0.49
MCF2L-228ENST00000487354 PTPDC1A2A3K4 754 aa18.14■□□□□ 0.49
MCF2L-228ENST00000487354 ORC4O43929 436 aa18.14■□□□□ 0.49
MCF2L-228ENST00000487354 WDR5P61964 334 aaKnown RBP18.14■□□□□ 0.49
MCF2L-228ENST00000487354 PTPN11Q06124 597 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-228ENST00000487354 PPP2R5BQ15173 497 aa18.14■□□□□ 0.49
MCF2L-228ENST00000487354 TMEM47Q9BQJ4 181 aa18.14■□□□□ 0.49
MCF2L-228ENST00000487354 FSD1Q9BTV5 496 aa18.14■□□□□ 0.49
MCF2L-228ENST00000487354 MUC6Q6W4X9 2439 aa18.14■□□□□ 0.49
MCF2L-228ENST00000487354 SALL3Q9BXA9 1300 aa18.14■□□□□ 0.49
MCF2L-228ENST00000487354 MYH7BA7E2Y1 1941 aa18.13■□□□□ 0.49
MCF2L-228ENST00000487354 NKRFO15226 690 aaKnown RBP eCLIP18.13■□□□□ 0.49
MCF2L-228ENST00000487354 BAIAP3O94812 1187 aa18.13■□□□□ 0.49
MCF2L-228ENST00000487354 CALML3P27482 149 aa18.13■□□□□ 0.49
MCF2L-228ENST00000487354 RPS6P62753 249 aaKnown RBP18.13■□□□□ 0.49
MCF2L-228ENST00000487354 DEFB103AP81534 67 aa18.13■□□□□ 0.49
MCF2L-228ENST00000487354 GDPD5Q8WTR4 605 aa18.13■□□□□ 0.49
MCF2L-228ENST00000487354 HLA-CQ95604 372 aa18.13■□□□□ 0.49
MCF2L-228ENST00000487354 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
MCF2L-228ENST00000487354 LAMA4Q16363 1823 aa18.13■□□□□ 0.49
MCF2L-228ENST00000487354 RANBP6O60518 1105 aaKnown RBP18.12■□□□□ 0.49
MCF2L-228ENST00000487354 PDHBP11177 359 aa18.12■□□□□ 0.49
MCF2L-228ENST00000487354 RNF207Q6ZRF8 634 aa18.12■□□□□ 0.49
MCF2L-228ENST00000487354 SCFD2Q8WU76 684 aa18.12■□□□□ 0.49
MCF2L-228ENST00000487354 KAT2BQ92831 832 aa18.12■□□□□ 0.49
MCF2L-228ENST00000487354 FTOQ9C0B1 505 aaKnown RBP eCLIP18.12■□□□□ 0.49
MCF2L-228ENST00000487354 GPCPD1Q9NPB8 672 aa18.12■□□□□ 0.49
MCF2L-228ENST00000487354 PDE4DQ08499 809 aa18.11■□□□□ 0.49
MCF2L-228ENST00000487354 RBL2Q08999 1139 aa18.11■□□□□ 0.49
MCF2L-228ENST00000487354 BFSP2Q13515 415 aa18.11■□□□□ 0.49
MCF2L-228ENST00000487354 LRRFIP1Q32MZ4 808 aaKnown RBP18.11■□□□□ 0.49
MCF2L-228ENST00000487354 TMEM31Q5JXX7 168 aa18.11■□□□□ 0.49
MCF2L-228ENST00000487354 GDF6Q6KF10 455 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-228ENST00000487354 CCDC62Q6P9F0 684 aa18.11■□□□□ 0.49
MCF2L-228ENST00000487354 SESTD1Q86VW0 696 aa18.11■□□□□ 0.49
MCF2L-228ENST00000487354 RETREG2Q8NC44 543 aa18.11■□□□□ 0.49
MCF2L-228ENST00000487354 GPHNQ9NQX3 736 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-228ENST00000487354 WDR19Q8NEZ3 1342 aa18.11■□□□□ 0.49
MCF2L-228ENST00000487354 PIEZO1Q92508 2521 aa18.11■□□□□ 0.49
MCF2L-228ENST00000487354 NLRC5Q86WI3 1866 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 RAD50Q92878 1312 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 FAM86C2PA6NEL3 165 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 KPNA6O60684 536 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 GPR37L1O60883 481 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 NBNO60934 754 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 CXCL10P02778 98 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 MMP3P08254 477 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 SNHG28P0DPA3 235 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 TXNP10599 105 aaKnown RBP18.1■□□□□ 0.49
MCF2L-228ENST00000487354 TOP1P11387 765 aaKnown RBP18.1■□□□□ 0.49
MCF2L-228ENST00000487354 PTGISQ16647 500 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 TRAF7Q6Q0C0 670 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 DNERQ8NFT8 737 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 AFAP1L1Q8TED9 768 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 TCP11L1Q9NUJ3 509 aa18.1■□□□□ 0.49
MCF2L-228ENST00000487354 ARHGAP1Q07960 439 aa18.09■□□□□ 0.49
MCF2L-228ENST00000487354 ZNF543Q08ER8 600 aa18.09■□□□□ 0.49
MCF2L-228ENST00000487354 ALX1Q15699 326 aa18.09■□□□□ 0.49
MCF2L-228ENST00000487354 CAGE1Q8TC20 777 aa18.09■□□□□ 0.49
MCF2L-228ENST00000487354 AFG1LQ8WV93 481 aa18.09■□□□□ 0.49
MCF2L-228ENST00000487354 SUGCTQ9HAC7 445 aa18.09■□□□□ 0.49
MCF2L-228ENST00000487354 COL20A1Q9P218 1284 aa18.09■□□□□ 0.49
MCF2L-228ENST00000487354 HCN4Q9Y3Q4 1203 aa18.09■□□□□ 0.49
MCF2L-228ENST00000487354 KIF28PB7ZC32 967 aa18.08■□□□□ 0.48
MCF2L-228ENST00000487354 PI4K2BG5E9Z4 385 aa18.08■□□□□ 0.48
MCF2L-228ENST00000487354 MKRN4PQ13434 485 aaPredicted RBP18.08■□□□□ 0.48
MCF2L-228ENST00000487354 BRDTQ58F21 947 aaPredicted RBP18.08■□□□□ 0.48
MCF2L-228ENST00000487354 LRRC8DQ7L1W4 858 aa18.08■□□□□ 0.48
MCF2L-228ENST00000487354 WNT8BQ93098 351 aa18.08■□□□□ 0.48
MCF2L-228ENST00000487354 LMCD1Q9NZU5 365 aa18.08■□□□□ 0.48
MCF2L-228ENST00000487354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-228ENST00000487354 LINC01553A4QN01 128 aa18.07■□□□□ 0.48
MCF2L-228ENST00000487354 GJB5O95377 273 aa18.07■□□□□ 0.48
MCF2L-228ENST00000487354 SELPP16109 830 aa18.07■□□□□ 0.48
MCF2L-228ENST00000487354 MX1P20591 662 aa18.07■□□□□ 0.48
MCF2L-228ENST00000487354 KCNJ6P48051 423 aa18.07■□□□□ 0.48
MCF2L-228ENST00000487354 ERVK-21P61565 698 aa18.07■□□□□ 0.48
MCF2L-228ENST00000487354 MBTPS1Q14703 1052 aa18.07■□□□□ 0.48
MCF2L-228ENST00000487354 TRIM71Q2Q1W2 868 aaKnown RBP18.07■□□□□ 0.48
MCF2L-228ENST00000487354 CNKSR3Q6P9H4 555 aa18.07■□□□□ 0.48
MCF2L-228ENST00000487354 TBC1D5Q92609 795 aa18.07■□□□□ 0.48
MCF2L-228ENST00000487354 CPVLQ9H3G5 476 aa18.07■□□□□ 0.48
MCF2L-228ENST00000487354 PCDHB15Q9Y5E8 787 aa18.07■□□□□ 0.48
MCF2L-228ENST00000487354 FGAP02671 866 aa18.06■□□□□ 0.48
MCF2L-228ENST00000487354 CKBP12277 381 aa18.06■□□□□ 0.48
MCF2L-228ENST00000487354 LY6KQ17RY6 165 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms