RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 USH1GQ495M9 461 aa19.01■□□□□ 0.63
SRRT-212ENST00000487311 NFRKBQ6P4R8 1299 aa19.01■□□□□ 0.63
SRRT-212ENST00000487311 SCFD2Q8WU76 684 aa19.01■□□□□ 0.63
SRRT-212ENST00000487311 RILPL2Q969X0 211 aa19.01■□□□□ 0.63
SRRT-212ENST00000487311 LNPKQ9C0E8 428 aa19.01■□□□□ 0.63
SRRT-212ENST00000487311 CERS4Q9HA82 394 aa19.01■□□□□ 0.63
SRRT-212ENST00000487311 COL20A1Q9P218 1284 aa19.01■□□□□ 0.63
SRRT-212ENST00000487311 ZMYM6O95789 1325 aa19■□□□□ 0.63
SRRT-212ENST00000487311 CCDC171Q6TFL3 1326 aa19■□□□□ 0.63
SRRT-212ENST00000487311 WDR19Q8NEZ3 1342 aa19■□□□□ 0.63
SRRT-212ENST00000487311 EPOPA6NHQ4 379 aa19■□□□□ 0.63
SRRT-212ENST00000487311 TRIM6-TRIM34B2RNG4 842 aa19■□□□□ 0.63
SRRT-212ENST00000487311 NKRFO15226 690 aaKnown RBP eCLIP19■□□□□ 0.63
SRRT-212ENST00000487311 GPNMBQ14956 572 aa19■□□□□ 0.63
SRRT-212ENST00000487311 CCDC62Q6P9F0 684 aa19■□□□□ 0.63
SRRT-212ENST00000487311 MICALL1Q8N3F8 863 aa19■□□□□ 0.63
SRRT-212ENST00000487311 ADAMTS19Q8TE59 1207 aa19■□□□□ 0.63
SRRT-212ENST00000487311 TAAR1Q96RJ0 339 aa19■□□□□ 0.63
SRRT-212ENST00000487311 CTAGE1Q96RT6 745 aa19■□□□□ 0.63
SRRT-212ENST00000487311 CA3P07451 260 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 PFKMP08237 780 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 SDSP20132 328 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 CHMP4BP1P59074 171 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 TFF2Q03403 129 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 LY6KQ17RY6 165 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 TMEM67Q5HYA8 995 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 KRT40Q6A162 431 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 RGS22Q8NE09 1264 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 TET1Q8NFU7 2136 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 AFG1LQ8WV93 481 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 RAPGEFL1Q9UHV5 662 aa18.99■□□□□ 0.63
SRRT-212ENST00000487311 KPNA6O60684 536 aa18.98■□□□□ 0.63
SRRT-212ENST00000487311 BMP1P13497 986 aa18.98■□□□□ 0.63
SRRT-212ENST00000487311 SEPT14Q6ZU15 432 aa18.98■□□□□ 0.63
SRRT-212ENST00000487311 DGKHQ86XP1 1220 aa18.98■□□□□ 0.63
SRRT-212ENST00000487311 TICAM2Q86XR7 235 aa18.98■□□□□ 0.63
SRRT-212ENST00000487311 NECAB3Q96P71 396 aaPredicted RBP18.98■□□□□ 0.63
SRRT-212ENST00000487311 PNMA2Q9UL42 364 aa18.98■□□□□ 0.63
SRRT-212ENST00000487311 MTCH2Q9Y6C9 303 aa18.98■□□□□ 0.63
SRRT-212ENST00000487311 TCF20Q9UGU0 1960 aaKnown RBP18.98■□□□□ 0.63
SRRT-212ENST00000487311 TRIP12Q14669 1992 aaPredicted RBP18.97■□□□□ 0.63
SRRT-212ENST00000487311 PITPNM1O00562 1244 aa18.97■□□□□ 0.63
SRRT-212ENST00000487311 PCP11498 1178 aaKnown RBP18.97■□□□□ 0.63
SRRT-212ENST00000487311 COL9A1P20849 921 aa18.97■□□□□ 0.63
SRRT-212ENST00000487311 TAP1Q03518 808 aa18.97■□□□□ 0.63
SRRT-212ENST00000487311 CDC37Q16543 378 aaPredicted RBP18.97■□□□□ 0.63
SRRT-212ENST00000487311 BRDTQ58F21 947 aaPredicted RBP18.97■□□□□ 0.63
SRRT-212ENST00000487311 GPATCH4Q5T3I0 446 aaKnown RBP18.97■□□□□ 0.63
SRRT-212ENST00000487311 B4GALNT3Q6L9W6 998 aa18.97■□□□□ 0.63
SRRT-212ENST00000487311 SPRED2Q7Z698 418 aa18.97■□□□□ 0.63
SRRT-212ENST00000487311 ADGRF4Q8IZF3 695 aa18.97■□□□□ 0.63
SRRT-212ENST00000487311 RETREG2Q8NC44 543 aa18.97■□□□□ 0.63
SRRT-212ENST00000487311 SYTL5Q8TDW5 730 aaPredicted RBP18.97■□□□□ 0.63
SRRT-212ENST00000487311 ESR2Q92731 530 aa18.97■□□□□ 0.63
SRRT-212ENST00000487311 KAT2BQ92831 832 aa18.97■□□□□ 0.63
SRRT-212ENST00000487311 UHRF1Q96T88 793 aaPredicted RBP18.97■□□□□ 0.63
SRRT-212ENST00000487311 ZNF213O14771 459 aa18.96■□□□□ 0.63
SRRT-212ENST00000487311 KDM4AO75164 1064 aa18.96■□□□□ 0.63
SRRT-212ENST00000487311 RFC2P35250 354 aa18.96■□□□□ 0.63
SRRT-212ENST00000487311 PTPN11Q06124 597 aaPredicted RBP18.96■□□□□ 0.63
SRRT-212ENST00000487311 ARHGAP1Q07960 439 aa18.96■□□□□ 0.63
SRRT-212ENST00000487311 GDF6Q6KF10 455 aaPredicted RBP18.96■□□□□ 0.63
SRRT-212ENST00000487311 PNMA1Q8ND90 353 aa18.96■□□□□ 0.63
SRRT-212ENST00000487311 PHOSPHO2Q8TCD6 241 aa18.96■□□□□ 0.63
SRRT-212ENST00000487311 ANKS1AQ92625 1134 aa18.96■□□□□ 0.63
SRRT-212ENST00000487311 MPHOSPH6Q99547 160 aaKnown RBP18.96■□□□□ 0.63
SRRT-212ENST00000487311 FTOQ9C0B1 505 aaKnown RBP eCLIP18.96■□□□□ 0.63
SRRT-212ENST00000487311 RNF41Q9H4P4 317 aaPredicted RBP18.96■□□□□ 0.63
SRRT-212ENST00000487311 ZSWIM5Q9P217 1185 aa18.96■□□□□ 0.63
SRRT-212ENST00000487311 RAD50Q92878 1312 aa18.96■□□□□ 0.63
SRRT-212ENST00000487311 PRRC2BQ5JSZ5 2229 aaKnown RBP18.95■□□□□ 0.62
SRRT-212ENST00000487311 B4E1Z4 1266 aa18.95■□□□□ 0.62
SRRT-212ENST00000487311 MMP3P08254 477 aa18.95■□□□□ 0.62
SRRT-212ENST00000487311 ACTN1P12814 892 aa18.95■□□□□ 0.62
SRRT-212ENST00000487311 POU3F3P20264 500 aaPredicted RBP18.95■□□□□ 0.62
SRRT-212ENST00000487311 BFSP2Q13515 415 aa18.95■□□□□ 0.62
SRRT-212ENST00000487311 PTGISQ16647 500 aa18.95■□□□□ 0.62
SRRT-212ENST00000487311 CWC27Q6UX04 472 aaKnown RBP18.95■□□□□ 0.62
SRRT-212ENST00000487311 CHST3Q7LGC8 479 aa18.95■□□□□ 0.62
SRRT-212ENST00000487311 TMCO2Q7Z6W1 182 aaPredicted RBP18.95■□□□□ 0.62
SRRT-212ENST00000487311 HERC6Q8IVU3 1022 aa18.95■□□□□ 0.62
SRRT-212ENST00000487311 PLEKHM2Q8IWE5 1019 aa18.95■□□□□ 0.62
SRRT-212ENST00000487311 DHX38Q92620 1227 aaKnown RBP18.95■□□□□ 0.62
SRRT-212ENST00000487311 VAT1LQ9HCJ6 419 aa18.95■□□□□ 0.62
SRRT-212ENST00000487311 B4DLN1 442 aa18.94■□□□□ 0.62
SRRT-212ENST00000487311 IGHDP01880 384 aa18.94■□□□□ 0.62
SRRT-212ENST00000487311 KCNQ1P51787 676 aa18.94■□□□□ 0.62
SRRT-212ENST00000487311 MRPL12P52815 198 aaKnown RBP18.94■□□□□ 0.62
SRRT-212ENST00000487311 TCTN1Q2MV58 587 aa18.94■□□□□ 0.62
SRRT-212ENST00000487311 QRICH1Q2TAL8 776 aa18.94■□□□□ 0.62
SRRT-212ENST00000487311 SMC5Q8IY18 1101 aa18.94■□□□□ 0.62
SRRT-212ENST00000487311 NSUN6Q8TEA1 469 aaKnown RBP18.94■□□□□ 0.62
SRRT-212ENST00000487311 ARNTL2Q8WYA1 636 aa18.94■□□□□ 0.62
SRRT-212ENST00000487311 SLC9A7Q96T83 725 aa18.94■□□□□ 0.62
SRRT-212ENST00000487311 JMJD4Q9H9V9 463 aa18.94■□□□□ 0.62
SRRT-212ENST00000487311 DDX41Q9UJV9 622 aaKnown RBP18.94■□□□□ 0.62
SRRT-212ENST00000487311 TRANK1O15050 2925 aa18.93■□□□□ 0.62
SRRT-212ENST00000487311 GH1P01241 217 aa18.93■□□□□ 0.62
SRRT-212ENST00000487311 SESTD1Q86VW0 696 aa18.93■□□□□ 0.62
SRRT-212ENST00000487311 ENAHQ8N8S7 591 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms