RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 DNERQ8NFT8 737 aa26.36■■□□□ 1.81
SHISA4-203ENST00000481699 FOXD4L4Q8WXT5 416 aaPredicted RBP26.36■■□□□ 1.81
SHISA4-203ENST00000481699 PGBD1Q96JS3 809 aa26.36■■□□□ 1.81
SHISA4-203ENST00000481699 TAAR1Q96RJ0 339 aa26.36■■□□□ 1.81
SHISA4-203ENST00000481699 SMCHD1A6NHR9 2005 aa26.36■■□□□ 1.81
SHISA4-203ENST00000481699 ZSCAN22P10073 491 aaPredicted RBP26.35■■□□□ 1.81
SHISA4-203ENST00000481699 FERMT3Q86UX7 667 aa26.35■■□□□ 1.81
SHISA4-203ENST00000481699 NOSTRINQ8IVI9 506 aa26.35■■□□□ 1.81
SHISA4-203ENST00000481699 FAM133AQ8N9E0 248 aa26.35■■□□□ 1.81
SHISA4-203ENST00000481699 COL20A1Q9P218 1284 aa26.35■■□□□ 1.81
SHISA4-203ENST00000481699 DNAJC25-GNG10A0A024R161 153 aa26.34■■□□□ 1.81
SHISA4-203ENST00000481699 M0R2N6 131 aa26.34■■□□□ 1.81
SHISA4-203ENST00000481699 ADAMTS3O15072 1205 aa26.34■■□□□ 1.81
SHISA4-203ENST00000481699 EIF2AK2P19525 551 aaKnown RBP26.34■■□□□ 1.81
SHISA4-203ENST00000481699 CTGFP29279 349 aa26.34■■□□□ 1.81
SHISA4-203ENST00000481699 BRAPQ7Z569 592 aa26.34■■□□□ 1.81
SHISA4-203ENST00000481699 ZSCAN16Q9H4T2 348 aaPredicted RBP26.34■■□□□ 1.81
SHISA4-203ENST00000481699 PXMP2Q9NR77 195 aa26.34■■□□□ 1.81
SHISA4-203ENST00000481699 CIZ1Q9ULV3 898 aaPredicted RBP26.34■■□□□ 1.81
SHISA4-203ENST00000481699 NOL7Q9UMY1 257 aaKnown RBP26.34■■□□□ 1.81
SHISA4-203ENST00000481699 PLXNB2O15031 1838 aa26.34■■□□□ 1.81
SHISA4-203ENST00000481699 COBLO75128 1261 aa26.33■■□□□ 1.81
SHISA4-203ENST00000481699 CYP2B6P20813 491 aa26.33■■□□□ 1.81
SHISA4-203ENST00000481699 U2AF2P26368 475 aaKnown RBP eCLIP26.33■■□□□ 1.81
SHISA4-203ENST00000481699 ZNF792Q3KQV3 632 aa26.33■■□□□ 1.81
SHISA4-203ENST00000481699 PURBQ96QR8 312 aaKnown RBP26.33■■□□□ 1.81
SHISA4-203ENST00000481699 APBA2Q99767 749 aa26.33■■□□□ 1.81
SHISA4-203ENST00000481699 DIS3Q9Y2L1 958 aaKnown RBP26.33■■□□□ 1.81
SHISA4-203ENST00000481699 KIF28PB7ZC32 967 aa26.32■■□□□ 1.8
SHISA4-203ENST00000481699 ALDH5A1P51649 535 aaPredicted RBP26.32■■□□□ 1.8
SHISA4-203ENST00000481699 TNFRSF25Q93038 417 aa26.32■■□□□ 1.8
SHISA4-203ENST00000481699 SOWAHBA6NEL2 793 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 ASB14A6NK59 587 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 CCND2P30279 289 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 ZNF76P36508 570 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 FLT3LGP49771 235 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 UBXN2AP68543 259 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 PRKCZQ05513 592 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 PDE4DQ08499 809 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 PKP1Q13835 747 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 TBCKQ8TEA7 893 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 IWS1Q96ST2 819 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 CHMP5Q9NZZ3 219 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 SRRDQ9UH36 339 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 GJD2Q9UKL4 321 aa26.31■■□□□ 1.8
SHISA4-203ENST00000481699 LOC102724159A0A0B4J2E5 919 aa26.3■■□□□ 1.8
SHISA4-203ENST00000481699 F13A1P00488 732 aa26.3■■□□□ 1.8
SHISA4-203ENST00000481699 MYCLP12524 364 aaPredicted RBP26.3■■□□□ 1.8
SHISA4-203ENST00000481699 SREBF1P36956 1147 aa26.3■■□□□ 1.8
SHISA4-203ENST00000481699 PRMT2P55345 433 aa26.3■■□□□ 1.8
SHISA4-203ENST00000481699 ARHGAP4P98171 946 aa26.3■■□□□ 1.8
SHISA4-203ENST00000481699 RESTQ13127 1097 aa26.3■■□□□ 1.8
SHISA4-203ENST00000481699 PWP2Q15269 919 aaKnown RBP26.3■■□□□ 1.8
SHISA4-203ENST00000481699 INF2Q27J81 1249 aa26.3■■□□□ 1.8
SHISA4-203ENST00000481699 ZNF467Q7Z7K2 595 aaPredicted RBP26.3■■□□□ 1.8
SHISA4-203ENST00000481699 USP6NLQ92738 828 aa26.3■■□□□ 1.8
SHISA4-203ENST00000481699 PDCD2LQ9BRP1 358 aa26.3■■□□□ 1.8
SHISA4-203ENST00000481699 TRIM17Q9Y577 477 aa26.3■■□□□ 1.8
SHISA4-203ENST00000481699 ZNF236Q9UL36 1845 aa26.3■■□□□ 1.8
SHISA4-203ENST00000481699 BRD1O95696 1058 aa26.29■■□□□ 1.8
SHISA4-203ENST00000481699 HOXC6P09630 235 aa26.29■■□□□ 1.8
SHISA4-203ENST00000481699 DDIT3P35638 169 aa26.29■■□□□ 1.8
SHISA4-203ENST00000481699 PGM5Q15124 567 aa26.29■■□□□ 1.8
SHISA4-203ENST00000481699 XRRA1Q6P2D8 792 aa26.29■■□□□ 1.8
SHISA4-203ENST00000481699 NEK8Q86SG6 692 aa26.29■■□□□ 1.8
SHISA4-203ENST00000481699 RAET1EQ8TD07 263 aa26.29■■□□□ 1.8
SHISA4-203ENST00000481699 MAML3Q96JK9 1138 aa26.29■■□□□ 1.8
SHISA4-203ENST00000481699 NAP1L4Q99733 375 aaKnown RBP26.29■■□□□ 1.8
SHISA4-203ENST00000481699 GABRQQ9UN88 632 aa26.29■■□□□ 1.8
SHISA4-203ENST00000481699 RPTORQ8N122 1335 aa26.29■■□□□ 1.8
SHISA4-203ENST00000481699 MGAMO43451 1857 aa26.28■■□□□ 1.8
SHISA4-203ENST00000481699 NR3C2P08235 984 aa26.28■■□□□ 1.8
SHISA4-203ENST00000481699 ATP2B1P20020 1258 aa26.28■■□□□ 1.8
SHISA4-203ENST00000481699 TRMT44Q8IYL2 757 aaKnown RBP26.28■■□□□ 1.8
SHISA4-203ENST00000481699 NPLOC4Q8TAT6 608 aa26.28■■□□□ 1.8
SHISA4-203ENST00000481699 ATP6V1DQ9Y5K8 247 aa26.28■■□□□ 1.8
SHISA4-203ENST00000481699 FRMPD4Q14CM0 1322 aa26.28■■□□□ 1.8
SHISA4-203ENST00000481699 FAM205CA6NFA0 338 aa26.27■■□□□ 1.8
SHISA4-203ENST00000481699 XRCC5P13010 732 aaKnown RBP26.27■■□□□ 1.8
SHISA4-203ENST00000481699 RGS19P49795 217 aa26.27■■□□□ 1.8
SHISA4-203ENST00000481699 USP11P51784 963 aa26.27■■□□□ 1.8
SHISA4-203ENST00000481699 STXBP2Q15833 593 aa26.27■■□□□ 1.8
SHISA4-203ENST00000481699 LETM2Q2VYF4 491 aa26.27■■□□□ 1.8
SHISA4-203ENST00000481699 EARS2Q5JPH6 523 aaKnown RBP26.27■■□□□ 1.8
SHISA4-203ENST00000481699 PCNX4Q63HM2 1172 aa26.27■■□□□ 1.8
SHISA4-203ENST00000481699 MSL3Q8N5Y2 521 aaKnown RBP26.27■■□□□ 1.8
SHISA4-203ENST00000481699 TRAPPC10P48553 1259 aa26.26■■□□□ 1.79
SHISA4-203ENST00000481699 RILPL1Q5EBL4 403 aa26.26■■□□□ 1.79
SHISA4-203ENST00000481699 MCOLN1Q9GZU1 580 aa26.26■■□□□ 1.79
SHISA4-203ENST00000481699 STAM2O75886 525 aa26.25■■□□□ 1.79
SHISA4-203ENST00000481699 CAP1Q01518 475 aa26.25■■□□□ 1.79
SHISA4-203ENST00000481699 IRF5Q13568 498 aa26.25■■□□□ 1.79
SHISA4-203ENST00000481699 OLFML2BQ68BL8 750 aa26.25■■□□□ 1.79
SHISA4-203ENST00000481699 ARMCX2Q7L311 632 aa26.25■■□□□ 1.79
SHISA4-203ENST00000481699 OTOP1Q7RTM1 612 aa26.25■■□□□ 1.79
SHISA4-203ENST00000481699 IL31RAQ8NI17 732 aa26.25■■□□□ 1.79
SHISA4-203ENST00000481699 FGD4Q96M96 766 aa26.25■■□□□ 1.79
SHISA4-203ENST00000481699 TINF2Q9BSI4 451 aa26.25■■□□□ 1.79
SHISA4-203ENST00000481699 ZSWIM8A7E2V4 1837 aa26.25■■□□□ 1.79
SHISA4-203ENST00000481699 CASP8AP2Q9UKL3 1982 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms