RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 CYTH3O43739 400 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 HEXIM1O94992 359 aaKnown RBP15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 PAFAH1B1P43034 410 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 KLHL7Q8IXQ5 586 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 OR2W6PQ8NHA6 318 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 KRT12Q99456 494 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 STX8Q9UNK0 236 aa15.21■□□□□ 0.03
SEMA4D-217ENST00000475255 MYH3P11055 1940 aa15.21■□□□□ 0.02
SEMA4D-217ENST00000475255 GOLGA8KD6RF30 607 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 CPP00450 1065 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 MECOMQ03112 1051 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 KCNB1Q14721 858 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 PNMA1Q8ND90 353 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 DHTKD1Q96HY7 919 aaPredicted RBP15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 NUP58Q9BVL2 599 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 NDST4Q9H3R1 872 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 PARP4Q9UKK3 1724 aaKnown RBP15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 OPA1O60313 960 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 ATP2C2O75185 946 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 EPHB4P54760 987 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 CFAP58Q5T655 872 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 GJA10Q969M2 543 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 PYM1Q9BRP8 204 aaKnown RBP15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 PLAGL2Q9UPG8 496 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 SSBP05455 408 aaKnown RBP eCLIP15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 TXKP42681 527 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 CACNA2D4Q7Z3S7 1137 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 OTUD6BQ8N6M0 293 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 IL17RBQ9NRM6 502 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 TBC1D7Q9P0N9 293 aa15.2■□□□□ 0.02
SEMA4D-217ENST00000475255 CALML3P27482 149 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 KLHDC7AQ5VTJ3 777 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 MAATS1Q7Z4T9 603 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 ALS2CR12Q96Q35 445 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 DISP2A7MBM2 1401 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 FLT1P17948 1338 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 DUOX1Q9NRD9 1551 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 HDLBPQ00341 1268 aaKnown RBP15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 EHHADHQ08426 723 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 VWA3BQ502W6 1294 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 DDX42Q86XP3 938 aaKnown RBP eCLIP15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 ACSBG1Q96GR2 724 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 CD248Q9HCU0 757 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 PPANQ9NQ55 473 aaKnown RBP15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 TCP11L1Q9NUJ3 509 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 SIK3Q9Y2K2 1263 aa15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 CICQ96RK0 1608 aaPredicted RBP15.19■□□□□ 0.02
SEMA4D-217ENST00000475255 PALMO75781 387 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 BRINP3Q76B58 766 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 JPH2Q9BR39 696 aaPredicted RBP15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 BRIP1Q9BX63 1249 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 PACSIN1Q9BY11 444 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 TSGA10Q9BZW7 698 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 TAF1P21675 1872 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 KIAA0754O94854 1291 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 LSP1P33241 339 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 KCNQ4P56696 695 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 IFT88Q13099 833 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 FAM84BQ96KN1 310 aaPredicted RBP15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 ERGIC2Q96RQ1 377 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 BCORQ6W2J9 1755 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 BICDL2A1A5D9 508 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 TCP1P17987 556 aaKnown RBP15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 HLTFQ14527 1009 aaKnown RBP eCLIP15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 CADPS2Q86UW7 1296 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 CASKIN2Q8WXE0 1202 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 TMEM260Q9NX78 707 aa15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 BCCIPQ9P287 314 aaKnown RBP eCLIP15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 BIN2Q9UBW5 565 aaPredicted RBP15.18■□□□□ 0.02
SEMA4D-217ENST00000475255 MYMKA6NI61 221 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 KIF5BP33176 963 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 NAA35Q5VZE5 725 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 NSUN4Q96CB9 384 aaKnown RBP15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 MYCBPQ99417 103 aaPredicted RBP15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 NCAPGQ9BPX3 1015 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 CCSER1Q9C0I3 900 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 TOGARAM1Q9Y4F4 1720 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 NUP98P52948 1817 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 CEP85LQ5SZL2 805 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 EMBQ6PCB8 327 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 ZNF662Q6ZS27 426 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 NUDT12Q9BQG2 462 aa15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 MMTAG2Q9BU76 263 aaKnown RBP15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 SAP30BPQ9UHR5 308 aaKnown RBP15.17■□□□□ 0.02
SEMA4D-217ENST00000475255 DOCK2Q92608 1830 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 E7EVH7 732 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 OR52Z1P0C646 297 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 KLRC1P26715 233 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 NAPAP54920 295 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 CAVIN4Q5BKX8 364 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 SUGP1Q8IWZ8 645 aaKnown RBP15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 PIK3R5Q8WYR1 880 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 CELF1Q92879 486 aaKnown RBP15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms