RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 GJB4Q9NTQ9 266 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 COL20A1Q9P218 1284 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 NRBP1Q9UHY1 535 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 KCNJ14Q9UNX9 436 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 PLXNA1Q9UIW2 1896 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 CYP3A7-CYP3A51PA0A087WV96 503 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 BTBD18B2RXH4 712 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 B4DLN1 442 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 POTEB2H3BUK9 544 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 CFBP00751 764 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 CYP3A7P24462 503 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 RGS2P41220 211 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 PSMC4P43686 418 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 PCNX4Q63HM2 1172 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 SAMD1Q6SPF0 538 aaPredicted RBP12.89□□□□□ -0.35
MSH5-214ENST00000468602 SLC30A10Q6XR72 485 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 VSIG10LQ86VR7 867 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 NOSTRINQ8IVI9 506 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 PXYLP1Q8TE99 480 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 NSUN6Q8TEA1 469 aaKnown RBP12.89□□□□□ -0.35
MSH5-214ENST00000468602 EHMT1Q9H9B1 1298 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 SRRDQ9UH36 339 aa12.89□□□□□ -0.35
MSH5-214ENST00000468602 ASTN1O14525 1302 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 ASB14A6NK59 587 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 CCDC85CA6NKD9 419 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 SPDYE3A6NKU9 549 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 H3BQV1 296 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 TNPO2O14787 897 aaKnown RBP12.88□□□□□ -0.35
MSH5-214ENST00000468602 ADAMTS3O15072 1205 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 MAFGO15525 162 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 EDIL3O43854 480 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 COBLO75128 1261 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 ZSCAN22P10073 491 aaPredicted RBP12.88□□□□□ -0.35
MSH5-214ENST00000468602 HSPA8P11142 646 aaKnown RBP12.88□□□□□ -0.35
MSH5-214ENST00000468602 TAL1P17542 331 aaPredicted RBP12.88□□□□□ -0.35
MSH5-214ENST00000468602 CAP1Q01518 475 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 ATL3Q6DD88 541 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 PPP4R3AQ6IN85 833 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 NSMFQ6X4W1 530 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 NIPA1Q7RTP0 329 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
MSH5-214ENST00000468602 OXER1Q8TDS5 423 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 NAP1L4Q99733 375 aaKnown RBP12.88□□□□□ -0.35
MSH5-214ENST00000468602 APBA2Q99767 749 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 PDCD2LQ9BRP1 358 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 ANO3Q9BYT9 981 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 PXMP2Q9NR77 195 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 HOMER2Q9NSB8 354 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 ZDHHC9Q9Y397 364 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 MYH7BA7E2Y1 1941 aa12.88□□□□□ -0.35
MSH5-214ENST00000468602 SOWAHBA6NEL2 793 aa12.87□□□□□ -0.35
MSH5-214ENST00000468602 KIF28PB7ZC32 967 aa12.87□□□□□ -0.35
MSH5-214ENST00000468602 GCFC2P16383 781 aaKnown RBP12.87□□□□□ -0.35
MSH5-214ENST00000468602 HOXA13P31271 388 aaPredicted RBP12.87□□□□□ -0.35
MSH5-214ENST00000468602 ALDH5A1P51649 535 aaPredicted RBP12.87□□□□□ -0.35
MSH5-214ENST00000468602 RESTQ13127 1097 aa12.87□□□□□ -0.35
MSH5-214ENST00000468602 NR5A1Q13285 461 aa12.87□□□□□ -0.35
MSH5-214ENST00000468602 PGM5Q15124 567 aa12.87□□□□□ -0.35
MSH5-214ENST00000468602 NONOQ15233 471 aaKnown RBP eCLIP12.87□□□□□ -0.35
MSH5-214ENST00000468602 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
MSH5-214ENST00000468602 MAML3Q96JK9 1138 aa12.87□□□□□ -0.35
MSH5-214ENST00000468602 INPP4AQ96PE3 977 aaPredicted RBP12.87□□□□□ -0.35
MSH5-214ENST00000468602 TAAR1Q96RJ0 339 aa12.87□□□□□ -0.35
MSH5-214ENST00000468602 RMDN3Q96TC7 470 aa12.87□□□□□ -0.35
MSH5-214ENST00000468602 MPHOSPH6Q99547 160 aaKnown RBP12.87□□□□□ -0.35
MSH5-214ENST00000468602 BIN2Q9UBW5 565 aaPredicted RBP12.87□□□□□ -0.35
MSH5-214ENST00000468602 DAXXQ9UER7 740 aaPredicted RBP12.87□□□□□ -0.35
MSH5-214ENST00000468602 LRRC37A2A6NM11 1700 aa12.87□□□□□ -0.35
MSH5-214ENST00000468602 RBM47A0AV96 593 aaKnown RBP12.86□□□□□ -0.35
MSH5-214ENST00000468602 DTNBO60941 627 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 F13A1P00488 732 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 NR3C2P08235 984 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 ICAM3P32942 547 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 SLC4A3P48751 1232 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 LBX1P52954 281 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 ARHGAP4P98171 946 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 CNTN2Q02246 1040 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 UBE2SQ16763 222 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 CLEC17AQ6ZS10 378 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 CD99L2Q8TCZ2 262 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 ARHGAP39Q9C0H5 1083 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 KATNBL1Q9H079 304 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 UBIAD1Q9Y5Z9 338 aa12.86□□□□□ -0.35
MSH5-214ENST00000468602 TNRC18O15417 2968 aaPredicted RBP12.86□□□□□ -0.35
MSH5-214ENST00000468602 CCDC194A0A1B0GVG4 234 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 MEIS1O00470 390 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 EIF3JO75822 258 aaKnown RBP12.85□□□□□ -0.35
MSH5-214ENST00000468602 TGFB3P10600 412 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 FLT3LGP49771 235 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 PKN2Q16513 984 aaKnown RBP12.85□□□□□ -0.35
MSH5-214ENST00000468602 Q4G0T1 1027 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 EARS2Q5JPH6 523 aaKnown RBP12.85□□□□□ -0.35
MSH5-214ENST00000468602 MYSM1Q5VVJ2 828 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 OTOP1Q7RTM1 612 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 NEK8Q86SG6 692 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 DPP9Q86TI2 863 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 NPLOC4Q8TAT6 608 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 TBCKQ8TEA7 893 aa12.85□□□□□ -0.35
MSH5-214ENST00000468602 TINF2Q9BSI4 451 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 207.1 ms