RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 IQCF3P0C7M6 154 aa12.04□□□□□ -0.48
TMEM54-203ENST00000463914 PDE1AP54750 535 aa12.04□□□□□ -0.48
TMEM54-203ENST00000463914 CHMP4BP1P59074 171 aa12.04□□□□□ -0.48
TMEM54-203ENST00000463914 SKIV2LQ15477 1246 aaKnown RBP12.04□□□□□ -0.48
TMEM54-203ENST00000463914 USH1GQ495M9 461 aa12.04□□□□□ -0.48
TMEM54-203ENST00000463914 TMEM67Q5HYA8 995 aa12.04□□□□□ -0.48
TMEM54-203ENST00000463914 ANKRD45Q5TZF3 282 aa12.04□□□□□ -0.48
TMEM54-203ENST00000463914 SPRED2Q7Z698 418 aa12.04□□□□□ -0.48
TMEM54-203ENST00000463914 SCFD2Q8WU76 684 aa12.04□□□□□ -0.48
TMEM54-203ENST00000463914 HELLSQ9NRZ9 838 aa12.04□□□□□ -0.48
TMEM54-203ENST00000463914 NEDD4P46934 1319 aa12.04□□□□□ -0.48
TMEM54-203ENST00000463914 RAD50Q92878 1312 aa12.04□□□□□ -0.48
TMEM54-203ENST00000463914 BRWD1Q9NSI6 2320 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 A6NJR5 290 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 GOLGA8HP0CJ92 632 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 SNHG28P0DPA3 235 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 TXNP10599 105 aaKnown RBP12.03□□□□□ -0.48
TMEM54-203ENST00000463914 HSPD1P10809 573 aaKnown RBP12.03□□□□□ -0.48
TMEM54-203ENST00000463914 ACTN1P12814 892 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 NMIQ13287 307 aaPredicted RBP12.03□□□□□ -0.48
TMEM54-203ENST00000463914 NFRKBQ6P4R8 1299 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 CTAGE1Q96RT6 745 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 SLC9A7Q96T83 725 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 TCP11L1Q9NUJ3 509 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 MTCH2Q9Y6C9 303 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 ZMYM6O95789 1325 aa12.03□□□□□ -0.48
TMEM54-203ENST00000463914 NKRFO15226 690 aaKnown RBP eCLIP12.02□□□□□ -0.49
TMEM54-203ENST00000463914 BMP1P13497 986 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 RFC2P35250 354 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 TAP1Q03518 808 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 MCMDC2Q4G0Z9 681 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 BRDTQ58F21 947 aaPredicted RBP12.02□□□□□ -0.49
TMEM54-203ENST00000463914 HERC6Q8IVU3 1022 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 RETREG2Q8NC44 543 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 DNERQ8NFT8 737 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 AFG1LQ8WV93 481 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 ARNTL2Q8WYA1 636 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 ZKSCAN3Q9BRR0 538 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 FTOQ9C0B1 505 aaKnown RBP eCLIP12.02□□□□□ -0.49
TMEM54-203ENST00000463914 UBA5Q9GZZ9 404 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 TSPYL2Q9H2G4 693 aaPredicted RBP12.02□□□□□ -0.49
TMEM54-203ENST00000463914 COL20A1Q9P218 1284 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 ZBTB47Q9UFB7 747 aaPredicted RBP12.02□□□□□ -0.49
TMEM54-203ENST00000463914 NOD1Q9Y239 953 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
TMEM54-203ENST00000463914 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
TMEM54-203ENST00000463914 KPNA6O60684 536 aa12.01□□□□□ -0.49
TMEM54-203ENST00000463914 CDC37Q16543 378 aaPredicted RBP12.01□□□□□ -0.49
TMEM54-203ENST00000463914 CCDC62Q6P9F0 684 aa12.01□□□□□ -0.49
TMEM54-203ENST00000463914 MFSD6Q6ZSS7 791 aa12.01□□□□□ -0.49
TMEM54-203ENST00000463914 TMCO2Q7Z6W1 182 aaPredicted RBP12.01□□□□□ -0.49
TMEM54-203ENST00000463914 TBC1D5Q92609 795 aa12.01□□□□□ -0.49
TMEM54-203ENST00000463914 DHX38Q92620 1227 aaKnown RBP12.01□□□□□ -0.49
TMEM54-203ENST00000463914 CRBNQ96SW2 442 aa12.01□□□□□ -0.49
TMEM54-203ENST00000463914 MPHOSPH6Q99547 160 aaKnown RBP12.01□□□□□ -0.49
TMEM54-203ENST00000463914 PNMA2Q9UL42 364 aa12.01□□□□□ -0.49
TMEM54-203ENST00000463914 MYH7BA7E2Y1 1941 aa12.01□□□□□ -0.49
TMEM54-203ENST00000463914 MUC3AQ02505 3323 aa12.01□□□□□ -0.49
TMEM54-203ENST00000463914 LCHNA4D1U4 455 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 MMP3P08254 477 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 POU3F3P20264 500 aaPredicted RBP12□□□□□ -0.49
TMEM54-203ENST00000463914 RRP1P56182 461 aaKnown RBP12□□□□□ -0.49
TMEM54-203ENST00000463914 PTPN11Q06124 597 aaPredicted RBP12□□□□□ -0.49
TMEM54-203ENST00000463914 ARHGAP1Q07960 439 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 GRB10Q13322 594 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 BFSP2Q13515 415 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 GPNMBQ14956 572 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 PTGISQ16647 500 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 LY6KQ17RY6 165 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 GDF6Q6KF10 455 aaPredicted RBP12□□□□□ -0.49
TMEM54-203ENST00000463914 SEPT14Q6ZU15 432 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 SYTL5Q8TDW5 730 aaPredicted RBP12□□□□□ -0.49
TMEM54-203ENST00000463914 KAT2BQ92831 832 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 LNPKQ9C0E8 428 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 SIP14410 1827 aa12□□□□□ -0.49
TMEM54-203ENST00000463914 LPXNO60711 386 aa11.99□□□□□ -0.49
TMEM54-203ENST00000463914 GH1P01241 217 aa11.99□□□□□ -0.49
TMEM54-203ENST00000463914 PCP11498 1178 aaKnown RBP11.99□□□□□ -0.49
TMEM54-203ENST00000463914 WDR5P61964 334 aaKnown RBP11.99□□□□□ -0.49
TMEM54-203ENST00000463914 DEFB103AP81534 67 aa11.99□□□□□ -0.49
TMEM54-203ENST00000463914 AAK1Q2M2I8 961 aa11.99□□□□□ -0.49
TMEM54-203ENST00000463914 TCTN1Q2MV58 587 aa11.99□□□□□ -0.49
TMEM54-203ENST00000463914 GPATCH4Q5T3I0 446 aaKnown RBP11.99□□□□□ -0.49
TMEM54-203ENST00000463914 LRRC8DQ7L1W4 858 aa11.99□□□□□ -0.49
TMEM54-203ENST00000463914 CHST3Q7LGC8 479 aa11.99□□□□□ -0.49
TMEM54-203ENST00000463914 PHOSPHO2Q8TCD6 241 aa11.99□□□□□ -0.49
TMEM54-203ENST00000463914 GDPD5Q8WTR4 605 aa11.99□□□□□ -0.49
TMEM54-203ENST00000463914 TTC14Q96N46 770 aa11.99□□□□□ -0.49
TMEM54-203ENST00000463914 TAAR1Q96RJ0 339 aa11.99□□□□□ -0.49
TMEM54-203ENST00000463914 MICAL3Q7RTP6 2002 aa11.98□□□□□ -0.49
TMEM54-203ENST00000463914 ABCB11O95342 1321 aa11.98□□□□□ -0.49
TMEM54-203ENST00000463914 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
TMEM54-203ENST00000463914 B4DLN1 442 aa11.98□□□□□ -0.49
TMEM54-203ENST00000463914 B4E1Z4 1266 aa11.98□□□□□ -0.49
TMEM54-203ENST00000463914 TLL1O43897 1013 aa11.98□□□□□ -0.49
TMEM54-203ENST00000463914 BAIAP3O94812 1187 aa11.98□□□□□ -0.49
TMEM54-203ENST00000463914 ZNF286BP0CG31 522 aa11.98□□□□□ -0.49
TMEM54-203ENST00000463914 EIF2AK2P19525 551 aaKnown RBP11.98□□□□□ -0.49
TMEM54-203ENST00000463914 KCNJ6P48051 423 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms