RNA–Protein interactions for RNA: ENST00000463764.2

TRANK1-202, Transcript of tetratricopeptide repeat and ankyrin repeat containing 1, humanhuman

TSL 2

Gene TRANK1, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1-202ENST00000463764 V9GY48 417 aaPredicted RBP13.17□□□□□ -0.3
TRANK1-202ENST00000463764 KIAA1217Q5T5P2 1943 aa13.17□□□□□ -0.3
TRANK1-202ENST00000463764 STK36Q9NRP7 1315 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 NKRFO15226 690 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRANK1-202ENST00000463764 DUSP11O75319 330 aaKnown RBP13.16□□□□□ -0.3
TRANK1-202ENST00000463764 CAPN15O75808 1086 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 FARP2O94887 1054 aaPredicted RBP13.16□□□□□ -0.3
TRANK1-202ENST00000463764 SNAI1O95863 264 aaPredicted RBP13.16□□□□□ -0.3
TRANK1-202ENST00000463764 ZNF865P0CJ78 1059 aaPredicted RBP13.16□□□□□ -0.3
TRANK1-202ENST00000463764 RGS19P49795 217 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 ADCY7P51828 1080 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 CCT2P78371 535 aaKnown RBP13.16□□□□□ -0.3
TRANK1-202ENST00000463764 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 IQSEC1Q6DN90 963 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 KCNV1Q6PIU1 500 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 RNF180Q86T96 592 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
TRANK1-202ENST00000463764 SCFD2Q8WU76 684 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 SLC26A6Q9BXS9 759 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 BACH2Q9BYV9 841 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 C6orf50Q9HD87 102 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 PXMP2Q9NR77 195 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 LIMCH1Q9UPQ0 1083 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 CENPFP49454 3210 aa13.16□□□□□ -0.3
TRANK1-202ENST00000463764 FRMPD4Q14CM0 1322 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 KBTBD13C9JR72 458 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 DNM1LO00429 736 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 OPLAHO14841 1288 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 EIF3JO75822 258 aaKnown RBP13.15□□□□□ -0.3
TRANK1-202ENST00000463764 TAL1P17542 331 aaPredicted RBP13.15□□□□□ -0.3
TRANK1-202ENST00000463764 CCND2P30279 289 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 NTRK3Q16288 839 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 BRDTQ58F21 947 aaPredicted RBP13.15□□□□□ -0.3
TRANK1-202ENST00000463764 WWC2Q6AWC2 1192 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 GALNT17Q6IS24 598 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 GTF3C6Q969F1 213 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 HTATIP2Q9BUP3 242 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 RIC8AQ9NPQ8 531 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 TPCN1Q9ULQ1 816 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 Q9Y3F1 56 aa13.15□□□□□ -0.3
TRANK1-202ENST00000463764 STXBP3O00186 592 aa13.14□□□□□ -0.31
TRANK1-202ENST00000463764 TNFAIP2Q03169 654 aa13.14□□□□□ -0.31
TRANK1-202ENST00000463764 STK3Q13188 491 aa13.14□□□□□ -0.31
TRANK1-202ENST00000463764 TTLL4Q14679 1199 aa13.14□□□□□ -0.31
TRANK1-202ENST00000463764 CCDC144BQ3MJ40 725 aa13.14□□□□□ -0.31
TRANK1-202ENST00000463764 NECAB2Q7Z6G3 386 aa13.14□□□□□ -0.31
TRANK1-202ENST00000463764 TRPV1Q8NER1 839 aa13.14□□□□□ -0.31
TRANK1-202ENST00000463764 GPKOWQ92917 476 aaPredicted RBP eCLIP13.14□□□□□ -0.31
TRANK1-202ENST00000463764 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
TRANK1-202ENST00000463764 XPNPEP3Q9NQH7 507 aa13.14□□□□□ -0.31
TRANK1-202ENST00000463764 KIF3AQ9Y496 699 aa13.14□□□□□ -0.31
TRANK1-202ENST00000463764 ASTN1O14525 1302 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 SMCO2A6NFE2 343 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 ZEB2O60315 1214 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 NR3C2P08235 984 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 EIF2AK2P19525 551 aaKnown RBP13.13□□□□□ -0.31
TRANK1-202ENST00000463764 EN2P19622 333 aaPredicted RBP13.13□□□□□ -0.31
TRANK1-202ENST00000463764 HOXA13P31271 388 aaPredicted RBP13.13□□□□□ -0.31
TRANK1-202ENST00000463764 MLLT1Q03111 559 aaPredicted RBP13.13□□□□□ -0.31
TRANK1-202ENST00000463764 SCRN1Q12765 414 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 LHX8Q68G74 356 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 NOL8Q76FK4 1167 aaKnown RBP13.13□□□□□ -0.31
TRANK1-202ENST00000463764 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 FBXO16Q8IX29 292 aaPredicted RBP13.13□□□□□ -0.31
TRANK1-202ENST00000463764 REXO1Q8N1G1 1221 aaKnown RBP13.13□□□□□ -0.31
TRANK1-202ENST00000463764 PCSK9Q8NBP7 692 aaKnown RBP13.13□□□□□ -0.31
TRANK1-202ENST00000463764 PHKBQ93100 1093 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 SHISA4Q96DD7 197 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 CDHR1Q96JP9 859 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 TAAR1Q96RJ0 339 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 PDCD2LQ9BRP1 358 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 LLPHQ9BRT6 129 aaKnown RBP13.13□□□□□ -0.31
TRANK1-202ENST00000463764 TSEN34Q9BSV6 310 aaKnown RBP13.13□□□□□ -0.31
TRANK1-202ENST00000463764 KATNBL1Q9H079 304 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 ZMYND12Q9H0C1 365 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 AP5M1Q9H0R1 490 aa13.13□□□□□ -0.31
TRANK1-202ENST00000463764 hCG_1642624A0A1W2PR95 340 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 RBM47A0AV96 593 aaKnown RBP13.12□□□□□ -0.31
TRANK1-202ENST00000463764 MOXD2PA6NHM9 499 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 MEIS2O14770 477 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 TGFB3P10600 412 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 CST5P28325 142 aaPredicted RBP13.12□□□□□ -0.31
TRANK1-202ENST00000463764 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
TRANK1-202ENST00000463764 PGM5Q15124 567 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 DUSP28Q4G0W2 176 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 PRAMEF19Q5SWL8 479 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 PCNX4Q63HM2 1172 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 NLRX1Q86UT6 975 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 KIF2CQ99661 725 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 SEZ6LQ9BYH1 1024 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 COL20A1Q9P218 1284 aa13.12□□□□□ -0.31
TRANK1-202ENST00000463764 CPT1AP50416 773 aa13.11□□□□□ -0.31
TRANK1-202ENST00000463764 GJA9P57773 515 aa13.11□□□□□ -0.31
TRANK1-202ENST00000463764 NKX3-2P78367 333 aa13.11□□□□□ -0.31
TRANK1-202ENST00000463764 ME3Q16798 604 aa13.11□□□□□ -0.31
TRANK1-202ENST00000463764 TLK2Q86UE8 772 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms