RNA–Protein interactions for RNA: ENST00000454403.1

TUBBP2-201, Transcript of tubulin beta pseudogene 2, humanhuman

BASIC

Gene TUBBP2, Length 411 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP2-201ENST00000454403 VTA1Q9NP79 307 aa11.71□□□□□ -0.53
TUBBP2-201ENST00000454403 RIC8AQ9NPQ8 531 aa11.71□□□□□ -0.53
TUBBP2-201ENST00000454403 TNRC18O15417 2968 aaPredicted RBP11.71□□□□□ -0.54
TUBBP2-201ENST00000454403 ASTN1O14525 1302 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 hCG_1642624A0A1W2PR95 340 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 RBM47A0AV96 593 aaKnown RBP11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 STXBP3O00186 592 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 EIF3JO75822 258 aaKnown RBP11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 STAM2O75886 525 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 GNA11P29992 359 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 STK3Q13188 491 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 LHX8Q68G74 356 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 IQSEC1Q6DN90 963 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 GALNT17Q6IS24 598 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 VSIG10LQ86VR7 867 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 TRPV1Q8NER1 839 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 WASF1Q92558 559 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 PHKBQ93100 1093 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 COL20A1Q9P218 1284 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 FAM184BQ9ULE4 1060 aa11.7□□□□□ -0.54
TUBBP2-201ENST00000454403 SMCO2A6NFE2 343 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 CTDNEP1O95476 244 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 NR3C2P08235 984 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 AKR1A1P14550 325 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 NAPAP54920 295 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 NKX3-2P78367 333 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 STXBP2Q15833 593 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 ARHGEF16Q5VV41 709 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 TYW1BQ6NUM6 668 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 ANKLE1Q8NAG6 615 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 CCDC148Q8NFR7 591 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 BICD2Q8TD16 824 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 U2AF1L4Q8WU68 220 aaKnown RBP11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 PURBQ96QR8 312 aaKnown RBP11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 PDCD2LQ9BRP1 358 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 C6orf50Q9HD87 102 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 PXMP2Q9NR77 195 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 DDX20Q9UHI6 824 aaKnown RBP11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 OGDHLQ9ULD0 1010 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 Q9Y3F1 56 aa11.69□□□□□ -0.54
TUBBP2-201ENST00000454403 FRMPD4Q14CM0 1322 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 DUSP11O75319 330 aaKnown RBP11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 TGFB3P10600 412 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 XBP1P17861 261 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 CCND3P30281 292 aaPredicted RBP11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 HOXA13P31271 388 aaPredicted RBP11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 ADCY7P51828 1080 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 PDE4DQ08499 809 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 AP3B2Q13367 1082 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 PRAMEF19Q5SWL8 479 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 TAPT1Q6NXT6 567 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 KCNV1Q6PIU1 500 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 USP17L6PQ6QN14 398 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 NECAB1Q8N987 351 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 GPKOWQ92917 476 aaPredicted RBP eCLIP11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 DEFB118Q96PH6 123 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 PDE4DIPQ5VU43 2346 aa11.68□□□□□ -0.54
TUBBP2-201ENST00000454403 RBBP6Q7Z6E9 1792 aaKnown RBP11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 MYH6P13533 1939 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 SPDYE3A6NKU9 549 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 NKRFO15226 690 aaKnown RBP eCLIP11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 MAFGO15525 162 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 LARGE1O95461 756 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 RARBP10826 455 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 FDPSP14324 419 aaKnown RBP11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 CLK2P49760 499 aaKnown RBP11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 HMGN5P82970 282 aaKnown RBP11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 CCDC144BQ3MJ40 725 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 PRPF38BQ5VTL8 546 aaKnown RBP11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 FCHSD1Q86WN1 690 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 ARRDC4Q8NCT1 418 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 NSUN7Q8NE18 718 aaKnown RBP11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 SCFD2Q8WU76 684 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 SHISA4Q96DD7 197 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 EHMT1Q9H9B1 1298 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 PCDHA6Q9UN73 950 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 PCDHA8Q9Y5H6 950 aa11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 MKI67P46013 3256 aaKnown RBP11.67□□□□□ -0.54
TUBBP2-201ENST00000454403 TFRCP02786 760 aaKnown RBP11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 CNGA1P29973 690 aa11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 CCND2P30279 289 aa11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 TNFAIP2Q03169 654 aa11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 PGM5Q15124 567 aa11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 DUSP28Q4G0W2 176 aa11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 PCNX4Q63HM2 1172 aa11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 CCDC62Q6P9F0 684 aa11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 DAGLBQ8NCG7 672 aa11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 TMX3Q96JJ7 454 aa11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 ZHX1Q9UKY1 873 aaPredicted RBP11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 PCDHA4Q9UN74 947 aa11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 GNEQ9Y223 722 aaKnown RBP11.66□□□□□ -0.54
TUBBP2-201ENST00000454403 EIF2AK2P19525 551 aaKnown RBP11.65□□□□□ -0.54
TUBBP2-201ENST00000454403 ICAM3P32942 547 aa11.65□□□□□ -0.54
TUBBP2-201ENST00000454403 GJA9P57773 515 aa11.65□□□□□ -0.54
TUBBP2-201ENST00000454403 NLRP5P59047 1200 aa11.65□□□□□ -0.54
TUBBP2-201ENST00000454403 ST3GAL1Q11201 340 aa11.65□□□□□ -0.54
TUBBP2-201ENST00000454403 TTLL4Q14679 1199 aa11.65□□□□□ -0.54
TUBBP2-201ENST00000454403 NOL8Q76FK4 1167 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms