RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.77■□□□□ 0.28
NCKIPSD-207ENST00000453349 VPS54Q9P1Q0 977 aa16.77■□□□□ 0.28
NCKIPSD-207ENST00000453349 COL20A1Q9P218 1284 aa16.77■□□□□ 0.28
NCKIPSD-207ENST00000453349 NRBP1Q9UHY1 535 aa16.77■□□□□ 0.28
NCKIPSD-207ENST00000453349 PLXNA1Q9UIW2 1896 aa16.77■□□□□ 0.27
NCKIPSD-207ENST00000453349 SPDYE3A6NKU9 549 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 DTNBO60941 627 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 SNAI1O95863 264 aaPredicted RBP16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 FOSP01100 380 aaPredicted RBP16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 FDPSP14324 419 aaKnown RBP16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 TRIM29Q14134 588 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 UBE2SQ16763 222 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 PRAMEF19Q5SWL8 479 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 MCTP2Q6DN12 878 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 FAM184AQ8NB25 1140 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 MORC4Q8TE76 937 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 SNX21Q969T3 373 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 ABHD8Q96I13 439 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 RNF208Q9H0X6 261 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 EHMT1Q9H9B1 1298 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 PXMP2Q9NR77 195 aa16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 RBBP6Q7Z6E9 1792 aaKnown RBP16.76■□□□□ 0.27
NCKIPSD-207ENST00000453349 JAK2O60674 1132 aa16.75■□□□□ 0.27
NCKIPSD-207ENST00000453349 CCL5P13501 91 aa16.75■□□□□ 0.27
NCKIPSD-207ENST00000453349 EIF2AK2P19525 551 aaKnown RBP16.75■□□□□ 0.27
NCKIPSD-207ENST00000453349 ACVR2BQ13705 512 aa16.75■□□□□ 0.27
NCKIPSD-207ENST00000453349 STXBP2Q15833 593 aa16.75■□□□□ 0.27
NCKIPSD-207ENST00000453349 MAP3K21Q5TCX8 1036 aa16.75■□□□□ 0.27
NCKIPSD-207ENST00000453349 GALNT17Q6IS24 598 aa16.75■□□□□ 0.27
NCKIPSD-207ENST00000453349 AIFM3Q96NN9 605 aa16.75■□□□□ 0.27
NCKIPSD-207ENST00000453349 PCDHA6Q9UN73 950 aa16.75■□□□□ 0.27
NCKIPSD-207ENST00000453349 PCDHA8Q9Y5H6 950 aa16.75■□□□□ 0.27
NCKIPSD-207ENST00000453349 ASTN1O14525 1302 aa16.74■□□□□ 0.27
NCKIPSD-207ENST00000453349 NR3C2P08235 984 aa16.74■□□□□ 0.27
NCKIPSD-207ENST00000453349 MTFR1Q15390 333 aa16.74■□□□□ 0.27
NCKIPSD-207ENST00000453349 HSCBQ8IWL3 235 aa16.74■□□□□ 0.27
NCKIPSD-207ENST00000453349 PDCD2LQ9BRP1 358 aa16.74■□□□□ 0.27
NCKIPSD-207ENST00000453349 UNC93B1Q9H1C4 597 aa16.74■□□□□ 0.27
NCKIPSD-207ENST00000453349 ZHX1Q9UKY1 873 aaPredicted RBP16.74■□□□□ 0.27
NCKIPSD-207ENST00000453349 KIF3AQ9Y496 699 aa16.74■□□□□ 0.27
NCKIPSD-207ENST00000453349 K7ELQ4 463 aaPredicted RBP16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 MYCLP12524 364 aaPredicted RBP16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 CYBAP13498 195 aa16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 EDNRBP24530 442 aa16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 CCND2P30279 289 aa16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 CCND3P30281 292 aaPredicted RBP16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 CLK2P49760 499 aaKnown RBP16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 AP3B2Q13367 1082 aa16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 PGM5Q15124 567 aa16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 EEPD1Q7L9B9 569 aa16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 BLIDQ8IZY5 108 aa16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 PHF20Q9BVI0 1012 aa16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 VTA1Q9NP79 307 aa16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 FAM184BQ9ULE4 1060 aa16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 PCDHA4Q9UN74 947 aa16.73■□□□□ 0.27
NCKIPSD-207ENST00000453349 CCDC85CA6NKD9 419 aa16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 SEPT4O43236 478 aa16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 MSCO60682 206 aa16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 EIF3JO75822 258 aaKnown RBP16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 ZNF865P0CJ78 1059 aaPredicted RBP16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 JAKMIP3Q5VZ66 844 aa16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 VSIG10LQ86VR7 867 aa16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 REXO1Q8N1G1 1221 aaKnown RBP16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 TRPV1Q8NER1 839 aa16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 BRMS1Q9HCU9 246 aa16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 TMEM260Q9NX78 707 aa16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 KCNJ14Q9UNX9 436 aa16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 SMC3Q9UQE7 1217 aa16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 DDX49Q9Y6V7 483 aaKnown RBP16.72■□□□□ 0.27
NCKIPSD-207ENST00000453349 STAM2O75886 525 aa16.71■□□□□ 0.27
NCKIPSD-207ENST00000453349 AKR1A1P14550 325 aa16.71■□□□□ 0.27
NCKIPSD-207ENST00000453349 CUL4AQ13619 759 aa16.71■□□□□ 0.27
NCKIPSD-207ENST00000453349 IQSEC1Q6DN90 963 aa16.71■□□□□ 0.27
NCKIPSD-207ENST00000453349 XRRA1Q6P2D8 792 aa16.71■□□□□ 0.27
NCKIPSD-207ENST00000453349 DAGLBQ8NCG7 672 aa16.71■□□□□ 0.27
NCKIPSD-207ENST00000453349 SHISA4Q96DD7 197 aa16.71■□□□□ 0.27
NCKIPSD-207ENST00000453349 C8orf76Q96K31 380 aa16.71■□□□□ 0.27
NCKIPSD-207ENST00000453349 ANO3Q9BYT9 981 aa16.71■□□□□ 0.27
NCKIPSD-207ENST00000453349 DDX20Q9UHI6 824 aaKnown RBP16.71■□□□□ 0.27
NCKIPSD-207ENST00000453349 GJB1P08034 283 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 CAPN2P17655 700 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 GJB2P29033 226 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 FOSBP53539 338 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 CCDC144BQ3MJ40 725 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 PCNX4Q63HM2 1172 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 TAPT1Q6NXT6 567 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 FBXO16Q8IX29 292 aaPredicted RBP16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 DEFB118Q96PH6 123 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 KATNBL1Q9H079 304 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 GJB4Q9NTQ9 266 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 LCTP09848 1927 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 FRMPD4Q14CM0 1322 aa16.7■□□□□ 0.26
NCKIPSD-207ENST00000453349 SGPL1O95470 568 aa16.69■□□□□ 0.26
NCKIPSD-207ENST00000453349 TFRCP02786 760 aaKnown RBP16.69■□□□□ 0.26
NCKIPSD-207ENST00000453349 KRT2P35908 639 aa16.69■□□□□ 0.26
NCKIPSD-207ENST00000453349 TNFAIP2Q03169 654 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms