RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 LRCH3Q96II8 777 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 RMDN3Q96TC7 470 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 CPVLQ9H3G5 476 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 VAT1LQ9HCJ6 419 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 PCDHA1Q9Y5I3 950 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 FRMPD3Q5JV73 1810 aa12.95□□□□□ -0.34
NELFE-205ENST00000441998 PLXNA1Q9UIW2 1896 aa12.94□□□□□ -0.34
NELFE-205ENST00000441998 CALM1P0DP23 149 aa12.94□□□□□ -0.34
NELFE-205ENST00000441998 CALM2P0DP24 149 aa12.94□□□□□ -0.34
NELFE-205ENST00000441998 CALM3P0DP25 149 aa12.94□□□□□ -0.34
NELFE-205ENST00000441998 TXNP10599 105 aaKnown RBP12.94□□□□□ -0.34
NELFE-205ENST00000441998 BEX3Q00994 111 aa12.94□□□□□ -0.34
NELFE-205ENST00000441998 PTPN11Q06124 597 aaPredicted RBP12.94□□□□□ -0.34
NELFE-205ENST00000441998 TSGA10IPQ3SY00 556 aa12.94□□□□□ -0.34
NELFE-205ENST00000441998 ERICH6BQ5W0A0 696 aa12.94□□□□□ -0.34
NELFE-205ENST00000441998 CCDC62Q6P9F0 684 aa12.94□□□□□ -0.34
NELFE-205ENST00000441998 TMEM199Q8N511 208 aa12.94□□□□□ -0.34
NELFE-205ENST00000441998 EMID1Q96A84 441 aaPredicted RBP12.94□□□□□ -0.34
NELFE-205ENST00000441998 MTG1Q9BT17 334 aaPredicted RBP12.94□□□□□ -0.34
NELFE-205ENST00000441998 SPZ1Q9BXG8 430 aa12.94□□□□□ -0.34
NELFE-205ENST00000441998 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
NELFE-205ENST00000441998 TMEM265A0A087WTH1 108 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 TGFB3P10600 412 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 ITGB8P26012 769 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 ANTXR2P58335 489 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 IRX5P78411 483 aaPredicted RBP12.93□□□□□ -0.34
NELFE-205ENST00000441998 PURAQ00577 322 aaKnown RBP12.93□□□□□ -0.34
NELFE-205ENST00000441998 PPIGQ13427 754 aaKnown RBP eCLIP12.93□□□□□ -0.341e-7■■■■□ 22.6
NELFE-205ENST00000441998 SHHQ15465 462 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 ARHGEF16Q5VV41 709 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 NFRKBQ6P4R8 1299 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 OR6J1Q8NGC5 347 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 CTCFLQ8NI51 663 aaPredicted RBP12.93□□□□□ -0.34
NELFE-205ENST00000441998 TBC1D5Q92609 795 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 CCDC136Q96JN2 1154 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 TAAR1Q96RJ0 339 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 LY9Q9HBG7 655 aa12.93□□□□□ -0.34
NELFE-205ENST00000441998 GRIN2DO15399 1336 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 GCOM1H8Y6P7 765 aaPredicted RBP12.92□□□□□ -0.34
NELFE-205ENST00000441998 OPLAHO14841 1288 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 SLC27A2O14975 620 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 PRC1O43663 620 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 STAM2O75886 525 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 CFBP00751 764 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 GH1P01241 217 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 NR3C2P08235 984 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 POLR2MP0CAP2 368 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 CREB3L3Q68CJ9 461 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 VSIG10LQ86VR7 867 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 SGMS1Q86VZ5 419 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 DEFB123Q8N688 67 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 ANO2Q9NQ90 1003 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 PXMP2Q9NR77 195 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 COL20A1Q9P218 1284 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 TAF6LQ9Y6J9 622 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
NELFE-205ENST00000441998 CCDC69A6NI79 296 aa12.91□□□□□ -0.34
NELFE-205ENST00000441998 SH2B2O14492 632 aaPredicted RBP12.91□□□□□ -0.34
NELFE-205ENST00000441998 CYTH3O43739 400 aa12.91□□□□□ -0.34
NELFE-205ENST00000441998 PPP1R11O60927 126 aaPredicted RBP12.91□□□□□ -0.34
NELFE-205ENST00000441998 HMGB1P09429 215 aaKnown RBP12.91□□□□□ -0.34
NELFE-205ENST00000441998 LAMC2Q13753 1193 aa12.91□□□□□ -0.34
NELFE-205ENST00000441998 KRT32Q14532 448 aa12.91□□□□□ -0.34
NELFE-205ENST00000441998 XRRA1Q6P2D8 792 aa12.91□□□□□ -0.34
NELFE-205ENST00000441998 PSRC1Q6PGN9 363 aaPredicted RBP12.91□□□□□ -0.34
NELFE-205ENST00000441998 SKAP1Q86WV1 359 aa12.91□□□□□ -0.34
NELFE-205ENST00000441998 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
NELFE-205ENST00000441998 RRP36Q96EU6 259 aaKnown RBP12.91□□□□□ -0.34
NELFE-205ENST00000441998 PIGSQ96S52 555 aa12.91□□□□□ -0.34
NELFE-205ENST00000441998 PDCD2LQ9BRP1 358 aa12.91□□□□□ -0.34
NELFE-205ENST00000441998 ALDH8A1Q9H2A2 487 aaPredicted RBP12.91□□□□□ -0.34
NELFE-205ENST00000441998 MTMR10Q9NXD2 777 aa12.91□□□□□ -0.34
NELFE-205ENST00000441998 DDX41Q9UJV9 622 aaKnown RBP12.91□□□□□ -0.34
NELFE-205ENST00000441998 DDX49Q9Y6V7 483 aaKnown RBP12.91□□□□□ -0.34
NELFE-205ENST00000441998 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.9□□□□□ -0.34
NELFE-205ENST00000441998 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.9□□□□□ -0.34
NELFE-205ENST00000441998 PIK3CDO00329 1044 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 EPB41L2O43491 1005 aaKnown RBP12.9□□□□□ -0.34
NELFE-205ENST00000441998 PPFIA4O75335 1185 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 CDC45O75419 566 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 CASTP20810 708 aaKnown RBP12.9□□□□□ -0.34
NELFE-205ENST00000441998 RCAN1P53805 252 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 SLC35G1Q2M3R5 365 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 C9orf50Q5SZB4 431 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 TMEM63BQ5T3F8 832 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 RASIP1Q5U651 963 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 CHST3Q7LGC8 479 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 SESTD1Q86VW0 696 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 RPUSD2Q8IZ73 545 aaKnown RBP12.9□□□□□ -0.34
NELFE-205ENST00000441998 RNPC3Q96LT9 517 aaKnown RBP12.9□□□□□ -0.34
NELFE-205ENST00000441998 MTIF3Q9H2K0 278 aaKnown RBP12.9□□□□□ -0.34
NELFE-205ENST00000441998 HIPK3Q9H422 1215 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 SENP2Q9HC62 589 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 STXBP5LQ9Y2K9 1186 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 SLC12A7Q9Y666 1083 aa12.9□□□□□ -0.34
NELFE-205ENST00000441998 B4GALT4O60513 344 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 PFKMP08237 780 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 MYL3P08590 195 aa12.89□□□□□ -0.35
NELFE-205ENST00000441998 HOXD8P13378 290 aaPredicted RBP12.89□□□□□ -0.35
NELFE-205ENST00000441998 DGKDQ16760 1214 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms