RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ERGIC2Q96RQ1 377 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 MAGEF1Q9HAY2 307 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 PSD3Q9NYI0 1048 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 KIF5AQ12840 1032 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 FKBP15Q5T1M5 1219 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 SV2BQ7L1I2 683 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 CCDC170Q8IYT3 715 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 RETREG2Q8NC44 543 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 NEDD1Q8NHV4 660 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 SECISBP2LQ93073 1101 aaKnown RBP17.59■□□□□ 0.41
CDH1-202ENST00000422392 LZTS2Q9BRK4 669 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 MMRN2Q9H8L6 949 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 CCNL1Q9UK58 526 aaPredicted RBP17.59■□□□□ 0.41
CDH1-202ENST00000422392 EDIL3O43854 480 aa17.58■□□□□ 0.41
CDH1-202ENST00000422392 VAV2P52735 878 aa17.58■□□□□ 0.41
CDH1-202ENST00000422392 GPSM2P81274 684 aa17.58■□□□□ 0.41
CDH1-202ENST00000422392 AMPD3Q01432 767 aa17.58■□□□□ 0.41
CDH1-202ENST00000422392 CALCRLQ16602 461 aa17.58■□□□□ 0.41
CDH1-202ENST00000422392 KCNK18Q7Z418 384 aa17.58■□□□□ 0.41
CDH1-202ENST00000422392 LRRC47Q8N1G4 583 aaKnown RBP17.58■□□□□ 0.41
CDH1-202ENST00000422392 LEMD3Q9Y2U8 911 aa17.58■□□□□ 0.41
CDH1-202ENST00000422392 ZNF831Q5JPB2 1677 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 MOCS3O95396 460 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 LDHCP07864 332 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 EZH2Q15910 746 aaKnown RBP17.58■□□□□ 0.4
CDH1-202ENST00000422392 MUM1L1Q5H9M0 696 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 CENPPQ6IPU0 288 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 FOXR1Q6PIV2 292 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.58■□□□□ 0.4
CDH1-202ENST00000422392 EHBP1Q8NDI1 1231 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 NDST4Q9H3R1 872 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 FAM204AQ9H8W3 233 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 CD209Q9NNX6 404 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 SMARCAL1Q9NZC9 954 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 LCMT1Q9UIC8 334 aa17.58■□□□□ 0.4
CDH1-202ENST00000422392 UFL1O94874 794 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 CXCR5P32302 372 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 ACTN2P35609 894 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 SPA17Q15506 151 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 VWA3BQ502W6 1294 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 ANKRD13CQ8N6S4 541 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 FAM71BQ8TC56 605 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 COG1Q8WTW3 980 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 LARP4BQ92615 738 aaKnown RBP17.57■□□□□ 0.4
CDH1-202ENST00000422392 MTMR9Q96QG7 549 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 PURBQ96QR8 312 aaKnown RBP17.57■□□□□ 0.4
CDH1-202ENST00000422392 IFIH1Q9BYX4 1025 aaKnown RBP17.57■□□□□ 0.4
CDH1-202ENST00000422392 EHD2Q9NZN4 543 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 SIK3Q9Y2K2 1263 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 BTAF1O14981 1849 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 TULP2O00295 520 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 SYF2O95926 243 aaKnown RBP17.57■□□□□ 0.4
CDH1-202ENST00000422392 EIF4A3P38919 411 aaKnown RBP17.57■□□□□ 0.4
CDH1-202ENST00000422392 ZNF662Q6ZS27 426 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 GOLGA5Q8TBA6 731 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 HPCAL4Q9UM19 191 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 PLAGL2Q9UPG8 496 aa17.57■□□□□ 0.4
CDH1-202ENST00000422392 RNF40O75150 1001 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 KIF11P52732 1056 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 RRAGAQ7L523 313 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 MSL3Q8N5Y2 521 aaKnown RBP17.56■□□□□ 0.4
CDH1-202ENST00000422392 HDAC7Q8WUI4 952 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 CDK5RAP3Q96JB5 506 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 DEF6Q9H4E7 631 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 ZNF287Q9HBT7 754 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 PCDHA13Q9Y5I0 950 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 MYH7BA7E2Y1 1941 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 LRRC53A6NM62 1247 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 TUBBP07437 444 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 PDHBP11177 359 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 MATR3P43243 847 aaKnown RBP eCLIP17.56■□□□□ 0.4
CDH1-202ENST00000422392 RHBDL3P58872 404 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 PICALMQ13492 652 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 UBE2SQ16763 222 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 MFSD14BQ5SR56 506 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 RC3H1Q5TC82 1133 aaKnown RBP17.56■□□□□ 0.4
CDH1-202ENST00000422392 GPCPD1Q9NPB8 672 aa17.56■□□□□ 0.4
CDH1-202ENST00000422392 GPR75-ASB3A0A0A6YYF3 556 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 A0A1W2PQJ5 194 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 RFC4P35249 363 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 TNNI2P48788 182 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 CKAP4Q07065 602 aaKnown RBP17.55■□□□□ 0.4
CDH1-202ENST00000422392 ECM1Q16610 540 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 UNC13DQ70J99 1090 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 PLEKHA4Q9H4M7 779 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 SALL4Q9UJQ4 1053 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 ZC3H4Q9UPT8 1303 aaKnown RBP17.55■□□□□ 0.4
CDH1-202ENST00000422392 SEMA3FQ13275 785 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 FIGNQ5HY92 759 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 NFRKBQ6P4R8 1299 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 LEKR1Q6ZMV7 388 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 CREG2Q8IUH2 290 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 SNX29Q8TEQ0 813 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 DDX12PQ92771 950 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 SH2D4AQ9H788 454 aa17.55■□□□□ 0.4
CDH1-202ENST00000422392 ANO9A1A5B4 782 aa17.54■□□□□ 0.4
CDH1-202ENST00000422392 NCK2O43639 380 aa17.54■□□□□ 0.4
CDH1-202ENST00000422392 AKR1B10O60218 316 aa17.54■□□□□ 0.4
CDH1-202ENST00000422392 SELENOOQ9BVL4 669 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms