RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 CCDC155Q8N6L0 562 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 RETREG2Q8NC44 543 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 RIN2Q8WYP3 895 aaPredicted RBP16.4■□□□□ 0.22
LINC00475-202ENST00000416438 ERGIC2Q96RQ1 377 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 MMRN2Q9H8L6 949 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 MAGEF1Q9HAY2 307 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 CD209Q9NNX6 404 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 CCDC88AQ3V6T2 1871 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
LINC00475-202ENST00000416438 CAPN2P17655 700 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 KIF5AQ12840 1032 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 HSP90B2PQ58FF3 399 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 CENPPQ6IPU0 288 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 PSD3Q9NYI0 1048 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 CAPN6Q9Y6Q1 641 aa16.4■□□□□ 0.22
LINC00475-202ENST00000416438 COL24A1Q17RW2 1714 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 RGL2O15211 777 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 CALCRLQ16602 461 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 VWA3BQ502W6 1294 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 KCNK18Q7Z418 384 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 LRRC47Q8N1G4 583 aaKnown RBP16.39■□□□□ 0.21
LINC00475-202ENST00000416438 SECISBP2LQ93073 1101 aaKnown RBP16.39■□□□□ 0.21
LINC00475-202ENST00000416438 MTMR9Q96QG7 549 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 PSMB7Q99436 277 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 NDST4Q9H3R1 872 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 BTAF1O14981 1849 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 UFL1O94874 794 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 VAV2P52735 878 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 ZNF662Q6ZS27 426 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 ZNF287Q9HBT7 754 aa16.39■□□□□ 0.21
LINC00475-202ENST00000416438 GPR75-ASB3A0A0A6YYF3 556 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 MOCS3O95396 460 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 RFC4P35249 363 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 RHBDL3P58872 404 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 SPA17Q15506 151 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 EZH2Q15910 746 aaKnown RBP16.38■□□□□ 0.21
LINC00475-202ENST00000416438 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.38■□□□□ 0.21
LINC00475-202ENST00000416438 ANKRD13CQ8N6S4 541 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 EHBP1Q8NDI1 1231 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 LARP4BQ92615 738 aaKnown RBP16.38■□□□□ 0.21
LINC00475-202ENST00000416438 PURBQ96QR8 312 aaKnown RBP16.38■□□□□ 0.21
LINC00475-202ENST00000416438 GPCPD1Q9NPB8 672 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 SMARCAL1Q9NZC9 954 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 SIK3Q9Y2K2 1263 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 SYF2O95926 243 aaKnown RBP16.38■□□□□ 0.21
LINC00475-202ENST00000416438 TUBBP07437 444 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 ACTN2P35609 894 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 EIF4A3P38919 411 aaKnown RBP16.38■□□□□ 0.21
LINC00475-202ENST00000416438 PICALMQ13492 652 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 MUM1L1Q5H9M0 696 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 FOXR1Q6PIV2 292 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 RRAGAQ7L523 313 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 MSL3Q8N5Y2 521 aaKnown RBP16.38■□□□□ 0.21
LINC00475-202ENST00000416438 COG1Q8WTW3 980 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 CDK5RAP3Q96JB5 506 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 IFIH1Q9BYX4 1025 aaKnown RBP16.38■□□□□ 0.21
LINC00475-202ENST00000416438 LCMT1Q9UIC8 334 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 PLAGL2Q9UPG8 496 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 PCDHA13Q9Y5I0 950 aa16.38■□□□□ 0.21
LINC00475-202ENST00000416438 PDHBP11177 359 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 CXCR5P32302 372 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 SEMA3FQ13275 785 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 ECM1Q16610 540 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 UBE2SQ16763 222 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 MFSD14BQ5SR56 506 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 FAM71BQ8TC56 605 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 HDAC7Q8WUI4 952 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 FAM204AQ9H8W3 233 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 EHD2Q9NZN4 543 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 A0A1W2PQJ5 194 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 LRRC53A6NM62 1247 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 TULP2O00295 520 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 MATR3P43243 847 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00475-202ENST00000416438 KIF11P52732 1056 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 CKAP4Q07065 602 aaKnown RBP16.37■□□□□ 0.21
LINC00475-202ENST00000416438 UNC13DQ70J99 1090 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 CNBD1Q8NA66 436 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 GOLGA5Q8TBA6 731 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 SNX29Q8TEQ0 813 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 DEF6Q9H4E7 631 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 RIOX1Q9H6W3 641 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 HPCAL4Q9UM19 191 aa16.37■□□□□ 0.21
LINC00475-202ENST00000416438 MAST2Q6P0Q8 1798 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 TOM1O60784 492 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 RNF40O75150 1001 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 TNNI2P48788 182 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 NT5C2P49902 561 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 FIGNQ5HY92 759 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 CREG2Q8IUH2 290 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 DDX12PQ92771 950 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 SALL4Q9UJQ4 1053 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 AKR1B10O60218 316 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 TRAPPC3LQ5T215 181 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 FAM196AQ6ZSG2 479 aa16.36■□□□□ 0.21
LINC00475-202ENST00000416438 ANO9A1A5B4 782 aa16.35■□□□□ 0.21
LINC00475-202ENST00000416438 NCK2O43639 380 aa16.35■□□□□ 0.21
LINC00475-202ENST00000416438 SLURP2P0DP57 97 aa16.35■□□□□ 0.21
LINC00475-202ENST00000416438 CDK17Q00537 523 aa16.35■□□□□ 0.21
LINC00475-202ENST00000416438 NFRKBQ6P4R8 1299 aa16.35■□□□□ 0.21
LINC00475-202ENST00000416438 CCNI2Q6ZMN8 369 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms