RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CTAGE1Q96RT6 745 aa14.14□□□□□ -0.15
TFF3-202ENST00000398431 ZKSCAN3Q9BRR0 538 aa14.14□□□□□ -0.15
TFF3-202ENST00000398431 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
TFF3-202ENST00000398431 PNMA2Q9UL42 364 aa14.14□□□□□ -0.15
TFF3-202ENST00000398431 CCDC171Q6TFL3 1326 aa14.14□□□□□ -0.15
TFF3-202ENST00000398431 TRIP12Q14669 1992 aaPredicted RBP14.13□□□□□ -0.15
TFF3-202ENST00000398431 ZBBXA8MT70 800 aa14.13□□□□□ -0.15
TFF3-202ENST00000398431 KPNA6O60684 536 aa14.13□□□□□ -0.15
TFF3-202ENST00000398431 ARHGEF15O94989 841 aa14.13□□□□□ -0.15
TFF3-202ENST00000398431 PCP11498 1178 aaKnown RBP14.13□□□□□ -0.15
TFF3-202ENST00000398431 POU3F3P20264 500 aaPredicted RBP14.13□□□□□ -0.15
TFF3-202ENST00000398431 MRPS5P82675 430 aaKnown RBP14.13□□□□□ -0.15
TFF3-202ENST00000398431 PTPN11Q06124 597 aaPredicted RBP14.13□□□□□ -0.15
TFF3-202ENST00000398431 PPP2R5BQ15173 497 aa14.13□□□□□ -0.15
TFF3-202ENST00000398431 PPP2R2DQ66LE6 453 aa14.13□□□□□ -0.15
TFF3-202ENST00000398431 DGKHQ86XP1 1220 aa14.13□□□□□ -0.15
TFF3-202ENST00000398431 ANKS1AQ92625 1134 aa14.13□□□□□ -0.15
TFF3-202ENST00000398431 TAAR1Q96RJ0 339 aa14.13□□□□□ -0.15
TFF3-202ENST00000398431 COL20A1Q9P218 1284 aa14.13□□□□□ -0.15
TFF3-202ENST00000398431 ZBTB47Q9UFB7 747 aaPredicted RBP14.13□□□□□ -0.15
TFF3-202ENST00000398431 NEDD4P46934 1319 aa14.13□□□□□ -0.15
TFF3-202ENST00000398431 EPOPA6NHQ4 379 aa14.12□□□□□ -0.15
TFF3-202ENST00000398431 PITPNM1O00562 1244 aa14.12□□□□□ -0.15
TFF3-202ENST00000398431 BMP1P13497 986 aa14.12□□□□□ -0.15
TFF3-202ENST00000398431 SDSP20132 328 aa14.12□□□□□ -0.15
TFF3-202ENST00000398431 USH1GQ495M9 461 aa14.12□□□□□ -0.15
TFF3-202ENST00000398431 FAM47CQ5HY64 1035 aa14.12□□□□□ -0.15
TFF3-202ENST00000398431 GPATCH4Q5T3I0 446 aaKnown RBP14.12□□□□□ -0.15
TFF3-202ENST00000398431 SYTL5Q8TDW5 730 aaPredicted RBP14.12□□□□□ -0.15
TFF3-202ENST00000398431 ADAMTS19Q8TE59 1207 aa14.12□□□□□ -0.15
TFF3-202ENST00000398431 LNPKQ9C0E8 428 aa14.12□□□□□ -0.15
TFF3-202ENST00000398431 PRRC2BQ5JSZ5 2229 aaKnown RBP14.12□□□□□ -0.15
TFF3-202ENST00000398431 TCF20Q9UGU0 1960 aaKnown RBP14.12□□□□□ -0.15
TFF3-202ENST00000398431 NCOR1O75376 2440 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 TRIM6-TRIM34B2RNG4 842 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 RBAK-RBAKDNI3L0D1 243 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 CA3P07451 260 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 RFC2P35250 354 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 LY6KQ17RY6 165 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 BRDTQ58F21 947 aaPredicted RBP14.11□□□□□ -0.15
TFF3-202ENST00000398431 TMEM67Q5HYA8 995 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 SMC5Q8IY18 1101 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 PHOSPHO2Q8TCD6 241 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 AFG1LQ8WV93 481 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 ESR2Q92731 530 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 KAT2BQ92831 832 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 RILPL2Q969X0 211 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 MAF1Q9H063 256 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 MTCH2Q9Y6C9 303 aa14.11□□□□□ -0.15
TFF3-202ENST00000398431 ZNF213O14771 459 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 TAP1Q03518 808 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 ARHGAP1Q07960 439 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 SEPT14Q6ZU15 432 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 PLEKHM2Q8IWE5 1019 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 ADGRF4Q8IZF3 695 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 RETREG2Q8NC44 543 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 PNMA1Q8ND90 353 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 SLC9A7Q96T83 725 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 MPHOSPH6Q99547 160 aaKnown RBP14.1□□□□□ -0.15
TFF3-202ENST00000398431 OSBPL3Q9H4L5 887 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 RNF41Q9H4P4 317 aaPredicted RBP14.1□□□□□ -0.15
TFF3-202ENST00000398431 CERS4Q9HA82 394 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 ZSWIM5Q9P217 1185 aa14.1□□□□□ -0.15
TFF3-202ENST00000398431 REV3LO60673 3130 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 B4DLN1 442 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 KDM4AO75164 1064 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 MMP3P08254 477 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 ACTN1P12814 892 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 COL9A1P20849 921 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 MRPL12P52815 198 aaKnown RBP14.09□□□□□ -0.15
TFF3-202ENST00000398431 TFF2Q03403 129 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 BFSP2Q13515 415 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 CDC37Q16543 378 aaPredicted RBP14.09□□□□□ -0.15
TFF3-202ENST00000398431 PTGISQ16647 500 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 KRT40Q6A162 431 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 GDF6Q6KF10 455 aaPredicted RBP14.09□□□□□ -0.15
TFF3-202ENST00000398431 SPRED2Q7Z698 418 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 SESTD1Q86VW0 696 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 HERC6Q8IVU3 1022 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 DHX38Q92620 1227 aaKnown RBP14.09□□□□□ -0.15
TFF3-202ENST00000398431 NECAB3Q96P71 396 aaPredicted RBP14.09□□□□□ -0.15
TFF3-202ENST00000398431 UHRF1Q96T88 793 aaPredicted RBP14.09□□□□□ -0.15
TFF3-202ENST00000398431 DDX41Q9UJV9 622 aaKnown RBP14.09□□□□□ -0.15
TFF3-202ENST00000398431 MUC3AQ02505 3323 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 ABCB11O95342 1321 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 RAD50Q92878 1312 aa14.09□□□□□ -0.15
TFF3-202ENST00000398431 PTPRSQ13332 1948 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 KIAA1217Q5T5P2 1943 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 B4E1Z4 1266 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 GH1P01241 217 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 IGHDP01880 384 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 TCTN1Q2MV58 587 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 QRICH1Q2TAL8 776 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 B4GALNT3Q6L9W6 998 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 CWC27Q6UX04 472 aaKnown RBP14.08□□□□□ -0.16
TFF3-202ENST00000398431 MICALL1Q8N3F8 863 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 ENAHQ8N8S7 591 aaPredicted RBP14.08□□□□□ -0.16
TFF3-202ENST00000398431 NSUN6Q8TEA1 469 aaKnown RBP14.08□□□□□ -0.16
TFF3-202ENST00000398431 IWS1Q96ST2 819 aa14.08□□□□□ -0.16
TFF3-202ENST00000398431 FTOQ9C0B1 505 aaKnown RBP eCLIP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms