RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 ADALQ6DHV7 355 aa17.49■□□□□ 0.39
VAMP1-202ENST00000396308 PPP4R3AQ6IN85 833 aa17.49■□□□□ 0.39
VAMP1-202ENST00000396308 MRPS27Q92552 414 aaKnown RBP17.49■□□□□ 0.39
VAMP1-202ENST00000396308 MPHOSPH6Q99547 160 aaKnown RBP17.49■□□□□ 0.39
VAMP1-202ENST00000396308 BTBD7Q9P203 1132 aa17.49■□□□□ 0.39
VAMP1-202ENST00000396308 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
VAMP1-202ENST00000396308 PCDHA7Q9UN72 937 aa17.49■□□□□ 0.39
VAMP1-202ENST00000396308 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
VAMP1-202ENST00000396308 TXLNAP40222 546 aa17.48■□□□□ 0.39
VAMP1-202ENST00000396308 PRPHP41219 470 aa17.48■□□□□ 0.39
VAMP1-202ENST00000396308 RPS6P62753 249 aaKnown RBP17.48■□□□□ 0.39
VAMP1-202ENST00000396308 CALCRLQ16602 461 aa17.48■□□□□ 0.39
VAMP1-202ENST00000396308 ANKRD35Q8N283 1001 aa17.48■□□□□ 0.39
VAMP1-202ENST00000396308 GPRC5AQ8NFJ5 357 aa17.48■□□□□ 0.39
VAMP1-202ENST00000396308 RAB34Q9BZG1 259 aa17.48■□□□□ 0.39
VAMP1-202ENST00000396308 MROH8Q9H579 483 aa17.48■□□□□ 0.39
VAMP1-202ENST00000396308 FAM13BQ9NYF5 915 aa17.48■□□□□ 0.39
VAMP1-202ENST00000396308 SRPRBQ9Y5M8 271 aaKnown RBP17.48■□□□□ 0.39
VAMP1-202ENST00000396308 B4DLN1 442 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 CYP2C8P10632 490 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 PTPREP23469 700 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 ERVK-9P63128 1117 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 ERVK-24P63145 666 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 HTRA3P83110 453 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 WDR78Q5VTH9 848 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 ARHGEF16Q5VV41 709 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 SLC30A10Q6XR72 485 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 DTHD1Q6ZMT9 781 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 FAM43AQ8N2R8 423 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 FSIP1Q8NA03 581 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 SHCBP1Q8NEM2 672 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 MOV10L1Q9BXT6 1211 aaKnown RBP17.47■□□□□ 0.39
VAMP1-202ENST00000396308 CREBZFQ9NS37 354 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 RIPK3Q9Y572 518 aa17.47■□□□□ 0.39
VAMP1-202ENST00000396308 CYP3A4P08684 503 aa17.46■□□□□ 0.39
VAMP1-202ENST00000396308 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-202ENST00000396308 GRM1Q13255 1194 aa17.46■□□□□ 0.39
VAMP1-202ENST00000396308 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-202ENST00000396308 TAF1CQ15572 869 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-202ENST00000396308 REM2Q8IYK8 340 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-202ENST00000396308 ZNF579Q8NAF0 562 aaKnown RBP17.46■□□□□ 0.39
VAMP1-202ENST00000396308 SYTL5Q8TDW5 730 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-202ENST00000396308 FBXO2Q9UK22 296 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-202ENST00000396308 VWA3AA6NCI4 1184 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 CNMDO75829 334 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 TDP2O95551 362 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 ERCC3P19447 782 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 CMA1P23946 247 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 CCND2P30279 289 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
VAMP1-202ENST00000396308 NOGQ13253 232 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 KCTD2Q14681 263 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 COL13A1Q5TAT6 717 aaPredicted RBP17.45■□□□□ 0.38
VAMP1-202ENST00000396308 XRRA1Q6P2D8 792 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 SLFN12Q8IYM2 578 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 ANKRD13CQ8N6S4 541 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 NSUN6Q8TEA1 469 aaKnown RBP17.45■□□□□ 0.38
VAMP1-202ENST00000396308 TBC1D5Q92609 795 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 CCDC34Q96HJ3 373 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 RMDN3Q96TC7 470 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 PYM1Q9BRP8 204 aaKnown RBP17.45■□□□□ 0.38
VAMP1-202ENST00000396308 A1CFQ9NQ94 594 aaKnown RBP17.45■□□□□ 0.38
VAMP1-202ENST00000396308 DDX19AQ9NUU7 478 aaKnown RBP17.45■□□□□ 0.38
VAMP1-202ENST00000396308 CYP39A1Q9NYL5 469 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 RBPJLQ9UBG7 517 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 ADD3Q9UEY8 706 aaKnown RBP17.45■□□□□ 0.38
VAMP1-202ENST00000396308 IVNS1ABPQ9Y6Y0 642 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 FRMPD4Q14CM0 1322 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 RPTORQ8N122 1335 aa17.45■□□□□ 0.38
VAMP1-202ENST00000396308 PLXNA1Q9UIW2 1896 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 CYP3A7-CYP3A51PA0A087WV96 503 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 WNT7AO00755 349 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 KINO60870 393 aaKnown RBP17.44■□□□□ 0.38
VAMP1-202ENST00000396308 FCER1AP12319 257 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 CYP3A7P24462 503 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 CIITAP33076 1130 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 FAM160A1Q05DH4 1040 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 FAM110CQ1W6H9 321 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 PCNX4Q63HM2 1172 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.44■□□□□ 0.38
VAMP1-202ENST00000396308 POTEDQ86YR6 584 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 IFNL1Q8IU54 200 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 GPT2Q8TD30 523 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 MMP19Q99542 508 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 ZFYVE28Q9HCC9 887 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 MORF4L1Q9UBU8 362 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 LCTP09848 1927 aa17.44■□□□□ 0.38
VAMP1-202ENST00000396308 ZNFX1Q9P2E3 1918 aaKnown RBP17.43■□□□□ 0.38
VAMP1-202ENST00000396308 FAM155AB1AL88 458 aaPredicted RBP17.43■□□□□ 0.38
VAMP1-202ENST00000396308 POTEB2H3BUK9 544 aa17.43■□□□□ 0.38
VAMP1-202ENST00000396308 TBX3O15119 743 aa17.43■□□□□ 0.38
VAMP1-202ENST00000396308 ALDH1A1P00352 501 aa17.43■□□□□ 0.38
VAMP1-202ENST00000396308 EIF2AK2P19525 551 aaKnown RBP17.43■□□□□ 0.38
VAMP1-202ENST00000396308 DEFB115Q30KQ5 88 aa17.43■□□□□ 0.38
VAMP1-202ENST00000396308 Q4G0T1 1027 aa17.43■□□□□ 0.38
VAMP1-202ENST00000396308 PRR16Q569H4 304 aa17.43■□□□□ 0.38
VAMP1-202ENST00000396308 AXDND1Q5T1B0 1012 aaPredicted RBP17.43■□□□□ 0.38
VAMP1-202ENST00000396308 RESP18Q5W5W9 173 aa17.43■□□□□ 0.38
VAMP1-202ENST00000396308 CAVIN1Q6NZI2 390 aaKnown RBP17.43■□□□□ 0.38
VAMP1-202ENST00000396308 DNERQ8NFT8 737 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms