RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 FRMD3A2A2Y4 597 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 F8W031 263 aaPredicted RBP16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 TRAF5O00463 557 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 RPS8P62241 208 aaKnown RBP16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 PRPF4BQ13523 1007 aaKnown RBP16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 TBC1D9BQ66K14 1250 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 NBPF5PQ86XG9 351 aaPredicted RBP16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 EFCAB13Q8IY85 973 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 UHMK1Q8TAS1 419 aaKnown RBP16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 ZIM3Q96PE6 472 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 FRMPD2Q68DX3 1309 aaPredicted RBP16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 CYTH3O43739 400 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 CALM1P0DP23 149 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 CALM2P0DP24 149 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 CALM3P0DP25 149 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 ZBED6P86452 979 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 ACTN3Q08043 901 aaPredicted RBP16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 ARHGAP20Q9P2F6 1191 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 SALL4Q9UJQ4 1053 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 SNX12Q9UMY4 172 aa16.12■□□□□ 0.17
LRRFIP1-204ENST00000392000 ITIH6Q6UXX5 1313 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 SEMA3EO15041 775 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 KIF5BP33176 963 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 PPFIA1Q13136 1202 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 SLC35G1Q2M3R5 365 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 KSR1Q8IVT5 923 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 AP1M1Q9BXS5 423 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 POTEMA6NI47 508 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 TUBBP07437 444 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 SETQ01105 290 aaPredicted RBP16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 TRIM58Q8NG06 486 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 ADAMTS1Q9UHI8 967 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 BCL9O00512 1426 aa16.11■□□□□ 0.17
LRRFIP1-204ENST00000392000 OPA1O60313 960 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 GLI1P08151 1106 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 POLR2FP61218 127 aaKnown RBP16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 DUSP9Q99956 384 aaKnown RBP16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 TAF1P21675 1872 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 COL1A1P02452 1464 aaPredicted RBP16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 LRRC10BA6NIK2 292 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 KLRF2D3W0D1 207 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 PARP10Q53GL7 1025 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 SOGA3Q5TF21 947 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 TCERG1LQ5VWI1 586 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 TRMT1LQ7Z2T5 733 aaKnown RBP16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 CREG2Q8IUH2 290 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 COA7Q96BR5 231 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 SCLT1Q96NL6 688 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 STIM2Q9P246 746 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 PCDHA6Q9UN73 950 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 HYOU1Q9Y4L1 999 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 PCDHA8Q9Y5H6 950 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 NUP188Q5SRE5 1749 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 TLDC2A0PJX2 215 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 EEF1GP26641 437 aaKnown RBP16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 TTI2Q6NXR4 508 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 MTMR8Q96EF0 704 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 RNPC3Q96LT9 517 aaKnown RBP16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 GOPCQ9HD26 462 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 PCDHA4Q9UN74 947 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 MYH7P12883 1935 aa16.1■□□□□ 0.17
LRRFIP1-204ENST00000392000 DDAH1O94760 285 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 PDE6BP35913 854 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 TNNI2P48788 182 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 TTMPQ5BVD1 217 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 PAPD7Q5XG87 772 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 DNAJC7Q99615 494 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 SMCO2A6NFE2 343 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 LONP1P36776 959 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 PICALMQ13492 652 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 E2F5Q15329 346 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 UBLCP1Q8WVY7 318 aaPredicted RBP16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 TBC1D5Q92609 795 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 BRIP1Q9BX63 1249 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 CCDC113Q9H0I3 377 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 NDST4Q9H3R1 872 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 CD248Q9HCU0 757 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 GOLGA6L10A6NI86 522 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 KRT18P05783 430 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 SRGNP10124 158 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 CALML3P27482 149 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 HNRNPH1P31943 449 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 TUBB4BP68371 445 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 UBE4AQ14139 1066 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 MMS22LQ6ZRQ5 1243 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 ELOA2Q8IYF1 753 aaPredicted RBP16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 CALML4Q96GE6 196 aa16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.09■□□□□ 0.172e-9■■■■■ 218.8
LRRFIP1-204ENST00000392000 SEPT11Q9NVA2 429 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-204ENST00000392000 SLIT2O94813 1529 aa16.08■□□□□ 0.17
LRRFIP1-204ENST00000392000 KCNK3O14649 394 aa16.08■□□□□ 0.17
LRRFIP1-204ENST00000392000 CEP104O60308 925 aa16.08■□□□□ 0.17
LRRFIP1-204ENST00000392000 PALMO75781 387 aa16.08■□□□□ 0.17
LRRFIP1-204ENST00000392000 CCNE1P24864 410 aa16.08■□□□□ 0.17
LRRFIP1-204ENST00000392000 TMOD1P28289 359 aa16.08■□□□□ 0.17
LRRFIP1-204ENST00000392000 KIAA0753Q2KHM9 967 aa16.08■□□□□ 0.17
LRRFIP1-204ENST00000392000 KIRREL3Q8IZU9 778 aa16.08■□□□□ 0.17
LRRFIP1-204ENST00000392000 NLRP3Q96P20 1036 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms