RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 RASSF7Q02833 373 aa23.33■■□□□ 1.33
COL23A1-201ENST00000390654 NONOQ15233 471 aaKnown RBP eCLIP23.33■■□□□ 1.33
COL23A1-201ENST00000390654 PTPROQ16827 1216 aa23.33■■□□□ 1.33
COL23A1-201ENST00000390654 MMTAG2Q9BU76 263 aaKnown RBP23.33■■□□□ 1.33
COL23A1-201ENST00000390654 BICDL2A1A5D9 508 aa23.33■■□□□ 1.32
COL23A1-201ENST00000390654 SSBP05455 408 aaKnown RBP eCLIP23.33■■□□□ 1.32
COL23A1-201ENST00000390654 CLEC10AQ8IUN9 316 aa23.33■■□□□ 1.32
COL23A1-201ENST00000390654 NUDT12Q9BQG2 462 aa23.33■■□□□ 1.32
COL23A1-201ENST00000390654 MYMKA6NI61 221 aa23.32■■□□□ 1.32
COL23A1-201ENST00000390654 RAD21O60216 631 aa23.32■■□□□ 1.32
COL23A1-201ENST00000390654 SBK1Q52WX2 424 aa23.32■■□□□ 1.32
COL23A1-201ENST00000390654 TDRD12Q587J7 1177 aaKnown RBP23.32■■□□□ 1.32
COL23A1-201ENST00000390654 CCDC181Q5TID7 509 aa23.32■■□□□ 1.32
COL23A1-201ENST00000390654 COA7Q96BR5 231 aa23.32■■□□□ 1.32
COL23A1-201ENST00000390654 NDST4Q9H3R1 872 aa23.32■■□□□ 1.32
COL23A1-201ENST00000390654 ESYT3A0FGR9 886 aa23.32■■□□□ 1.32
COL23A1-201ENST00000390654 TUBBP07437 444 aa23.32■■□□□ 1.32
COL23A1-201ENST00000390654 NUP58Q9BVL2 599 aa23.32■■□□□ 1.32
COL23A1-201ENST00000390654 SH3GLB2Q9NR46 395 aa23.32■■□□□ 1.32
COL23A1-201ENST00000390654 SNX12Q9UMY4 172 aa23.32■■□□□ 1.32
COL23A1-201ENST00000390654 F8W031 263 aaPredicted RBP23.31■■□□□ 1.32
COL23A1-201ENST00000390654 CLEC4GQ6UXB4 293 aa23.31■■□□□ 1.32
COL23A1-201ENST00000390654 GOLGA6CA6NDK9 693 aa23.31■■□□□ 1.32
COL23A1-201ENST00000390654 USO1O60763 962 aaKnown RBP23.31■■□□□ 1.32
COL23A1-201ENST00000390654 TACC1O75410 805 aa23.31■■□□□ 1.32
COL23A1-201ENST00000390654 GOLGA6DP0CG33 693 aa23.31■■□□□ 1.32
COL23A1-201ENST00000390654 SOGA3Q5TF21 947 aa23.31■■□□□ 1.32
COL23A1-201ENST00000390654 CCDC170Q8IYT3 715 aa23.31■■□□□ 1.32
COL23A1-201ENST00000390654 GOLGA6AQ9NYA3 693 aa23.31■■□□□ 1.32
COL23A1-201ENST00000390654 CACNB1Q02641 598 aaPredicted RBP23.31■■□□□ 1.32
COL23A1-201ENST00000390654 TPTE2Q6XPS3 522 aa23.31■■□□□ 1.32
COL23A1-201ENST00000390654 NEK8Q86SG6 692 aa23.31■■□□□ 1.32
COL23A1-201ENST00000390654 SPATA4Q8NEY3 305 aa23.31■■□□□ 1.32
COL23A1-201ENST00000390654 CDK5RAP3Q96JB5 506 aa23.31■■□□□ 1.32
COL23A1-201ENST00000390654 STRCQ7RTU9 1775 aa23.3■■□□□ 1.32
COL23A1-201ENST00000390654 ZSCAN5CA6NGD5 496 aaPredicted RBP23.3■■□□□ 1.32
COL23A1-201ENST00000390654 TDP2O95551 362 aa23.3■■□□□ 1.32
COL23A1-201ENST00000390654 KCTD16Q68DU8 428 aa23.3■■□□□ 1.32
COL23A1-201ENST00000390654 CALML4Q96GE6 196 aa23.3■■□□□ 1.32
COL23A1-201ENST00000390654 PACSIN2Q9UNF0 486 aaPredicted RBP23.3■■□□□ 1.32
COL23A1-201ENST00000390654 MAGEA1P43355 309 aa23.3■■□□□ 1.32
COL23A1-201ENST00000390654 GNAQP50148 359 aa23.3■■□□□ 1.32
COL23A1-201ENST00000390654 VWA3BQ502W6 1294 aa23.3■■□□□ 1.32
COL23A1-201ENST00000390654 TMED8Q6PL24 325 aaPredicted RBP23.3■■□□□ 1.32
COL23A1-201ENST00000390654 CACNA2D4Q7Z3S7 1137 aa23.3■■□□□ 1.32
COL23A1-201ENST00000390654 FAM114A1Q8IWE2 563 aa23.3■■□□□ 1.32
COL23A1-201ENST00000390654 RASA1P20936 1047 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 DNAAF5Q86Y56 855 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 OSBPL9Q96SU4 736 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 SLC37A4O43826 429 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 CCT5P48643 541 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 AARSP49588 968 aaKnown RBP eCLIP23.29■■□□□ 1.32
COL23A1-201ENST00000390654 SV2BQ7L1I2 683 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 KCNK18Q7Z418 384 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 FAM76AQ8TAV0 307 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 NGLY1Q96IV0 654 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 EYA3Q99504 573 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 TSPYL1Q9H0U9 437 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 SH2D4AQ9H788 454 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 PALM3A6NDB9 673 aaPredicted RBP23.29■■□□□ 1.32
COL23A1-201ENST00000390654 SLURP2P0DP57 97 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 CNNM4Q6P4Q7 775 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 AMOTL1Q8IY63 956 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 NOC3LQ8WTT2 800 aaKnown RBP23.29■■□□□ 1.32
COL23A1-201ENST00000390654 SEC63Q9UGP8 760 aaKnown RBP23.29■■□□□ 1.32
COL23A1-201ENST00000390654 JRKLQ9Y4A0 524 aa23.29■■□□□ 1.32
COL23A1-201ENST00000390654 MCM3P25205 808 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 SLC1A4P43007 532 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 PICALMQ13492 652 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 TSEN2Q8NCE0 465 aaKnown RBP23.28■■□□□ 1.32
COL23A1-201ENST00000390654 TRIM58Q8NG06 486 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 VIPAS39Q9H9C1 493 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 PLAGL2Q9UPG8 496 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 A0A1B0GUL6 1792 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 USP17L5A8MUK1 530 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 GRB10Q13322 594 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 CCDC70Q6NSX1 233 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 IFT81Q8WYA0 676 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 ARHGEF1Q92888 912 aaKnown RBP23.28■■□□□ 1.32
COL23A1-201ENST00000390654 MTMR8Q96EF0 704 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 C7orf25Q9BPX7 421 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 C6orf50Q9HD87 102 aa23.28■■□□□ 1.32
COL23A1-201ENST00000390654 MKRN1Q9UHC7 482 aaKnown RBP23.28■■□□□ 1.32
COL23A1-201ENST00000390654 CCNL1Q9UK58 526 aaPredicted RBP23.28■■□□□ 1.32
COL23A1-201ENST00000390654 NELFCDQ8IXH7 590 aa23.27■■□□□ 1.32
COL23A1-201ENST00000390654 RETREG2Q8NC44 543 aa23.27■■□□□ 1.32
COL23A1-201ENST00000390654 ERGIC2Q96RQ1 377 aa23.27■■□□□ 1.32
COL23A1-201ENST00000390654 ZMYND12Q9H0C1 365 aa23.27■■□□□ 1.32
COL23A1-201ENST00000390654 RBM12Q9NTZ6 932 aaKnown RBP23.27■■□□□ 1.32
COL23A1-201ENST00000390654 BLOC1S4Q9NUP1 217 aa23.27■■□□□ 1.32
COL23A1-201ENST00000390654 TARSL2A2RTX5 802 aaKnown RBP23.27■■□□□ 1.32
COL23A1-201ENST00000390654 SH2D3CQ8N5H7 860 aa23.27■■□□□ 1.32
COL23A1-201ENST00000390654 MSL3Q8N5Y2 521 aaKnown RBP23.27■■□□□ 1.32
COL23A1-201ENST00000390654 CDCA7Q9BWT1 371 aaPredicted RBP23.27■■□□□ 1.32
COL23A1-201ENST00000390654 SPATA31A5Q5VU36 1347 aa23.27■■□□□ 1.32
COL23A1-201ENST00000390654 SPATA31A7Q8IWB4 1347 aa23.27■■□□□ 1.32
COL23A1-201ENST00000390654 FTCDO95954 541 aa23.27■■□□□ 1.31
COL23A1-201ENST00000390654 AMPD3Q01432 767 aa23.27■■□□□ 1.31
COL23A1-201ENST00000390654 PROCA1Q8NCQ7 364 aaPredicted RBP23.27■■□□□ 1.31
COL23A1-201ENST00000390654 ARL8AQ96BM9 186 aa23.27■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms