RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 CEP85LQ5SZL2 805 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 CFAP58Q5T655 872 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 SH3RF1Q7Z6J0 888 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 UBLCP1Q8WVY7 318 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-202ENST00000375597 PLA2G12BQ9BX93 195 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 IL17RBQ9NRM6 502 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 PKD2L1Q9P0L9 805 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 USP17L5A8MUK1 530 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 STAT3P40763 770 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 CACNB3P54284 484 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 KIAA0753Q2KHM9 967 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 TBC1D9BQ66K14 1250 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 SV2BQ7L1I2 683 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 CEP57Q86XR8 500 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 ZNF34Q8IZ26 560 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 MSANTD4Q8NCY6 345 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 SPATA4Q8NEY3 305 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 DUSP9Q99956 384 aaKnown RBP13.07□□□□□ -0.32
MCF2L-202ENST00000375597 TMEM47Q9BQJ4 181 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 ARHGAP20Q9P2F6 1191 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 TNS3Q68CZ2 1445 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 MYO1FO00160 1098 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 ATP8B1O43520 1251 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 BUB1BO60566 1050 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-202ENST00000375597 ERLIN2O94905 339 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 CALM1P0DP23 149 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 CALM2P0DP24 149 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 CALM3P0DP25 149 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 HERC4Q5GLZ8 1057 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-202ENST00000375597 KCTD1Q719H9 257 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 CCDC51Q96ER9 411 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 SPAG5Q96R06 1193 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 NDST4Q9H3R1 872 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 JRKLQ9Y4A0 524 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 FAM169AQ9Y6X4 670 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 E7EVH7 732 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 PALMO75781 387 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 AMPD2Q01433 879 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 ADCY1Q08828 1119 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 TCP10Q12799 353 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 CALCRLQ16602 461 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 FAM98CQ17RN3 349 aaKnown RBP13.06□□□□□ -0.32
MCF2L-202ENST00000375597 ZSCAN29Q8IWY8 852 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-202ENST00000375597 MTMR8Q96EF0 704 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 OSBPL9Q96SU4 736 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 EYA3Q99504 573 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 TRIM9Q9C026 710 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 IKZF4Q9H2S9 585 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 MYH10P35580 1976 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 TRPM3Q9HCF6 1732 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-202ENST00000375597 TULP2O00295 520 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 CHMP2AO43633 222 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 USP8P40818 1118 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 SCNN1DP51172 638 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 NONOQ15233 471 aaKnown RBP eCLIP13.06□□□□□ -0.32
MCF2L-202ENST00000375597 SPATA20Q8TB22 786 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 MXD3Q9BW11 206 aa13.06□□□□□ -0.32
MCF2L-202ENST00000375597 CDHR2Q9BYE9 1310 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 EIF4E1BA6NMX2 242 aaKnown RBP13.05□□□□□ -0.32
MCF2L-202ENST00000375597 IFT88Q13099 833 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 NNTQ13423 1086 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 NFIXQ14938 502 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 USH1GQ495M9 461 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 TEX11Q8IYF3 940 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 SETDB2Q96T68 719 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 FGFBP2Q9BYJ0 223 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 MYH2Q9UKX2 1941 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 NWD2Q9ULI1 1742 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 MYMKA6NI61 221 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 E9PMD0 336 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 CLIC2O15247 247 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 INPP5BP32019 993 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 LONP1P36776 959 aaKnown RBP13.05□□□□□ -0.32
MCF2L-202ENST00000375597 TTI2Q6NXR4 508 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 CCNI2Q6ZMN8 369 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-202ENST00000375597 KCNK18Q7Z418 384 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 SEMA6BQ9H3T3 888 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 BCAS3Q9H6U6 928 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 GGT7Q9UJ14 662 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 RAB21Q9UL25 225 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 CAPN11Q9UMQ6 739 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 MST1RQ04912 1400 aa13.05□□□□□ -0.32
MCF2L-202ENST00000375597 SLC37A4O43826 429 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 GLI1P08151 1106 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 IRAK1P51617 712 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 VAV2P52735 878 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 RBM5P52756 815 aaKnown RBP eCLIP13.04□□□□□ -0.32
MCF2L-202ENST00000375597 UBXN2AP68543 259 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 TTBK2Q6IQ55 1244 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 REXO1Q8N1G1 1221 aaKnown RBP13.04□□□□□ -0.32
MCF2L-202ENST00000375597 OTUD6BQ8N6M0 293 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 TAF4BQ92750 862 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 ELMO3Q96BJ8 720 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 G3V3G9 751 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 CCNE1P24864 410 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 ZBED6P86452 979 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 DHX9Q08211 1270 aaKnown RBP13.04□□□□□ -0.32
MCF2L-202ENST00000375597 TRIM14Q14142 442 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms