RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TRIM66O15016 1216 aa19.67■□□□□ 0.74
RTN4-204ENST00000357732 USP17L8P0C7I0 530 aa19.67■□□□□ 0.74
RTN4-204ENST00000357732 EPB41P11171 864 aaKnown RBP19.67■□□□□ 0.74
RTN4-204ENST00000357732 KIF11P52732 1056 aa19.67■□□□□ 0.74
RTN4-204ENST00000357732 EPHB4P54760 987 aa19.67■□□□□ 0.74
RTN4-204ENST00000357732 PPFIA1Q13136 1202 aa19.67■□□□□ 0.74
RTN4-204ENST00000357732 NNTQ13423 1086 aa19.67■□□□□ 0.74
RTN4-204ENST00000357732 UNC13DQ70J99 1090 aa19.67■□□□□ 0.74
RTN4-204ENST00000357732 ZNF444Q8N0Y2 327 aaPredicted RBP19.67■□□□□ 0.74
RTN4-204ENST00000357732 RNF10Q8N5U6 811 aaKnown RBP19.67■□□□□ 0.74
RTN4-204ENST00000357732 PPM1EQ8WY54 764 aa19.67■□□□□ 0.74
RTN4-204ENST00000357732 SH3GL2Q99962 352 aa19.67■□□□□ 0.74
RTN4-204ENST00000357732 NDST4Q9H3R1 872 aa19.67■□□□□ 0.74
RTN4-204ENST00000357732 RNF216Q9NWF9 866 aaPredicted RBP19.67■□□□□ 0.74
RTN4-204ENST00000357732 TFR2Q9UP52 801 aa19.67■□□□□ 0.74
RTN4-204ENST00000357732 SSU72P8A0A1W2PR75 194 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 GOLGA6CA6NDK9 693 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 GOLGA6DP0CG33 693 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 KLK7P49862 253 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 ALS2CLQ60I27 953 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 SV2BQ7L1I2 683 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 EFCAB13Q8IY85 973 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 KIAA0895Q8NCT3 520 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 SPATA4Q8NEY3 305 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 GOLGA6AQ9NYA3 693 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 ARHGAP20Q9P2F6 1191 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 SPATA31A5Q5VU36 1347 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 SPATA31A7Q8IWB4 1347 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 ZNF185O15231 689 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 CCNT1O60563 726 aaKnown RBP19.66■□□□□ 0.74
RTN4-204ENST00000357732 BAG3O95817 575 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 NAPAP54920 295 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 PPP4CP60510 307 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 CYP27A1Q02318 531 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 PSMD2Q13200 908 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 SLC35G1Q2M3R5 365 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 TXNRD3Q86VQ6 643 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 WDR66Q8TBY9 1149 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 DEF6Q9H4E7 631 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 RSPH14Q9UHP6 348 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 NAV1Q8NEY1 1877 aa19.66■□□□□ 0.74
RTN4-204ENST00000357732 C2orf54Q08AI8 447 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 MAPK8IP2Q13387 824 aaPredicted RBP19.65■□□□□ 0.74
RTN4-204ENST00000357732 CAVIN3Q969G5 261 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 OSBPL9Q96SU4 736 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 PLIN2Q99541 437 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 SEMA6BQ9H3T3 888 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 DUSP10Q9Y6W6 482 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 NRAPQ86VF7 1730 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 MYBL2P10244 700 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 PAFAH1B1P43034 410 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 FXR2P51116 673 aaKnown RBP eCLIP19.65■□□□□ 0.742e-7■□□□□ 9.1
RTN4-204ENST00000357732 C2CD5Q86YS7 1000 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 PROM2Q8N271 834 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 TMEM47Q9BQJ4 181 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 RAB34Q9BZG1 259 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 RIC8AQ9NPQ8 531 aa19.65■□□□□ 0.74
RTN4-204ENST00000357732 KLRF2D3W0D1 207 aa19.64■□□□□ 0.74
RTN4-204ENST00000357732 FCER1AP12319 257 aa19.64■□□□□ 0.74
RTN4-204ENST00000357732 LETM2Q2VYF4 491 aa19.64■□□□□ 0.74
RTN4-204ENST00000357732 SOGA3Q5TF21 947 aa19.64■□□□□ 0.74
RTN4-204ENST00000357732 SYN2Q92777 582 aaPredicted RBP19.64■□□□□ 0.74
RTN4-204ENST00000357732 NLRP3Q96P20 1036 aa19.64■□□□□ 0.74
RTN4-204ENST00000357732 LUC7LQ9NQ29 371 aaKnown RBP19.64■□□□□ 0.74
RTN4-204ENST00000357732 SRP68Q9UHB9 627 aaKnown RBP19.64■□□□□ 0.74
RTN4-204ENST00000357732 CAPN6Q9Y6Q1 641 aa19.64■□□□□ 0.74
RTN4-204ENST00000357732 COL24A1Q17RW2 1714 aa19.64■□□□□ 0.73
RTN4-204ENST00000357732 AHDC1Q5TGY3 1603 aaPredicted RBP19.64■□□□□ 0.73
RTN4-204ENST00000357732 RBAK-RBAKDNI3L0D1 243 aa19.64■□□□□ 0.73
RTN4-204ENST00000357732 AKR1B10O60218 316 aa19.64■□□□□ 0.73
RTN4-204ENST00000357732 APBA1Q02410 837 aa19.64■□□□□ 0.73
RTN4-204ENST00000357732 RRP36Q96EU6 259 aaKnown RBP19.64■□□□□ 0.73
RTN4-204ENST00000357732 MMTAG2Q9BU76 263 aaKnown RBP19.64■□□□□ 0.73
RTN4-204ENST00000357732 STIM2Q9P246 746 aa19.64■□□□□ 0.73
RTN4-204ENST00000357732 IRS2Q9Y4H2 1338 aa19.64■□□□□ 0.73
RTN4-204ENST00000357732 SEPT2Q15019 361 aa19.63■□□□□ 0.73
RTN4-204ENST00000357732 CCDC181Q5TID7 509 aa19.63■□□□□ 0.73
RTN4-204ENST00000357732 FOXR1Q6PIV2 292 aa19.63■□□□□ 0.73
RTN4-204ENST00000357732 DYNLL2Q96FJ2 89 aa19.63■□□□□ 0.73
RTN4-204ENST00000357732 SEC63Q9UGP8 760 aaKnown RBP19.63■□□□□ 0.73
RTN4-204ENST00000357732 SMCO2A6NFE2 343 aa19.63■□□□□ 0.73
RTN4-204ENST00000357732 CPP00450 1065 aa19.63■□□□□ 0.73
RTN4-204ENST00000357732 LDHBP07195 334 aaKnown RBP19.63■□□□□ 0.73
RTN4-204ENST00000357732 LDHCP07864 332 aa19.63■□□□□ 0.73
RTN4-204ENST00000357732 EIF4A3P38919 411 aaKnown RBP19.63■□□□□ 0.73
RTN4-204ENST00000357732 PDIA5Q14554 519 aa19.63■□□□□ 0.73
RTN4-204ENST00000357732 TMEM266Q2M3C6 531 aa19.63■□□□□ 0.73
RTN4-204ENST00000357732 ASTE1Q2TB18 679 aaPredicted RBP19.62■□□□□ 0.73
RTN4-204ENST00000357732 SLC51AQ86UW1 340 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 NBPF5PQ86XG9 351 aaPredicted RBP19.62■□□□□ 0.73
RTN4-204ENST00000357732 NOX5Q96PH1 765 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 MTMR9Q96QG7 549 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 TSG101Q99816 390 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 USP17L3A6NCW0 530 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 USP17L4A6NCW7 530 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 ZMYND10O75800 440 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 TECP42680 631 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 MAGEA1P43355 309 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 SND1Q7KZF4 910 aaKnown RBP eCLIP19.62■□□□□ 0.733e-12■■■■□ 21.6
RTN4-204ENST00000357732 USP17L1Q7RTZ2 530 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms