RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 STX2P32856 288 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 NEDD9Q14511 834 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 MYCT1Q8N699 235 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 PPP1R14CQ8TAE6 165 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 PLVAPQ9BX97 442 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 ANKZF1Q9H8Y5 726 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 HPCAL4Q9UM19 191 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 MYO3AQ8NEV4 1616 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 ADCY7P51828 1080 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 DPH6Q7L8W6 267 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 KCNB2Q92953 911 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 KRT15P19012 456 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 STAT1P42224 750 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 PABPC4Q13310 644 aaKnown RBP eCLIP17.24■□□□□ 0.35
USP43-201ENST00000285199 VWA3BQ502W6 1294 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 MUM1L1Q5H9M0 696 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 PHLDB2Q86SQ0 1253 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 NLRP10Q86W26 655 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 EYA3Q99504 573 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 LACRTQ9GZZ8 138 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 DMGDHQ9UI17 866 aaKnown RBP17.24■□□□□ 0.35
USP43-201ENST00000285199 EXOC3O60645 756 aa17.23■□□□□ 0.35
USP43-201ENST00000285199 ABL1P00519 1130 aa17.23■□□□□ 0.35
USP43-201ENST00000285199 IGDCC4Q8TDY8 1250 aa17.23■□□□□ 0.35
USP43-201ENST00000285199 CEP152O94986 1710 aa17.23■□□□□ 0.35
USP43-201ENST00000285199 IFT74Q96LB3 600 aa17.23■□□□□ 0.35
USP43-201ENST00000285199 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.23■□□□□ 0.35
USP43-201ENST00000285199 GSG1L2A8MUP6 293 aa17.23■□□□□ 0.35
USP43-201ENST00000285199 PPP1R2P41236 205 aa17.23■□□□□ 0.35
USP43-201ENST00000285199 MAGOHP61326 146 aaKnown RBP17.23■□□□□ 0.35
USP43-201ENST00000285199 TCP10Q12799 353 aa17.23■□□□□ 0.35
USP43-201ENST00000285199 PTPAQ15257 358 aa17.23■□□□□ 0.35
USP43-201ENST00000285199 ZYXQ15942 572 aaKnown RBP17.23■□□□□ 0.35
USP43-201ENST00000285199 CCNI2Q6ZMN8 369 aaPredicted RBP17.23■□□□□ 0.35
USP43-201ENST00000285199 DDX42Q86XP3 938 aaKnown RBP eCLIP17.23■□□□□ 0.35
USP43-201ENST00000285199 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
USP43-201ENST00000285199 LARP4BQ92615 738 aaKnown RBP17.23■□□□□ 0.35
USP43-201ENST00000285199 MAGOHBQ96A72 148 aaKnown RBP17.23■□□□□ 0.35
USP43-201ENST00000285199 DHTKD1Q96HY7 919 aaPredicted RBP17.23■□□□□ 0.35
USP43-201ENST00000285199 ZRANB2O95218 330 aaKnown RBP eCLIP17.22■□□□□ 0.35
USP43-201ENST00000285199 NR2F2P24468 414 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 SLC44A5Q8NCS7 719 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 CCDC197Q8NCU1 140 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 IQCGQ9H095 443 aaKnown RBP17.22■□□□□ 0.35
USP43-201ENST00000285199 FRMD4BQ9Y2L6 1034 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 POTEMA6NI47 508 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 TMOD1P28289 359 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 PRPHP41219 470 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 RFX5P48382 616 aaPredicted RBP17.22■□□□□ 0.35
USP43-201ENST00000285199 CARSP49589 748 aaKnown RBP17.22■□□□□ 0.35
USP43-201ENST00000285199 SNX1Q13596 522 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 MESDQ14696 234 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 MAN2A1Q16706 1144 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 EMBQ6PCB8 327 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 GDAP1Q8TB36 358 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 HLA-DOAP06340 250 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 MTMR3Q13615 1198 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 DIXDC1Q155Q3 683 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 TRIP13Q15645 432 aaPredicted RBP17.22■□□□□ 0.35
USP43-201ENST00000285199 STXBP4Q6ZWJ1 553 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 PACS2Q86VP3 889 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 ARL8AQ96BM9 186 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 IQGAP1P46940 1657 aa17.22■□□□□ 0.35
USP43-201ENST00000285199 PRPF3O43395 683 aaKnown RBP17.21■□□□□ 0.35
USP43-201ENST00000285199 IFNB1P01574 187 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 SLC16A2P36021 539 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 SLC1A4P43007 532 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 HDLBPQ00341 1268 aaKnown RBP17.21■□□□□ 0.35
USP43-201ENST00000285199 ZNF365Q70YC5 407 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 TPH2Q8IWU9 490 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 GFPT2O94808 682 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 HARSP12081 509 aaKnown RBP17.21■□□□□ 0.35
USP43-201ENST00000285199 EXOC3L4Q17RC7 722 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 PRR16Q569H4 304 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 KLHL29Q96CT2 875 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 SNX24Q9Y343 169 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 PTPRMP28827 1452 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 GSTO1P78417 241 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 TXNRD1Q16881 649 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 LRCH2Q5VUJ6 765 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 CD248Q9HCU0 757 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 PCDHA4Q9UN74 947 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 DNM3Q9UQ16 869 aa17.21■□□□□ 0.35
USP43-201ENST00000285199 RFC4P35249 363 aa17.21■□□□□ 0.34
USP43-201ENST00000285199 PDIA6Q15084 440 aa17.21■□□□□ 0.34
USP43-201ENST00000285199 FAM167BQ9BTA0 163 aa17.21■□□□□ 0.34
USP43-201ENST00000285199 TRIM7Q9C029 511 aa17.21■□□□□ 0.34
USP43-201ENST00000285199 MAP3K15Q6ZN16 1313 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 CORO7P57737 925 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 ZNF211Q13398 564 aaPredicted RBP17.2■□□□□ 0.34
USP43-201ENST00000285199 DDB1Q16531 1140 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 ALS2CLQ60I27 953 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 ANKRD40Q6AI12 368 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 KCNV2Q8TDN2 545 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 BCS1LQ9Y276 419 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 MYO1EQ12965 1108 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 PIGSQ96S52 555 aa17.2■□□□□ 0.34
USP43-201ENST00000285199 RBM12Q9NTZ6 932 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms