RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 EEF1GP26641 437 aaKnown RBP16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 USP17L2Q6R6M4 530 aa16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 MLXIPQ9HAP2 919 aa16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 CD209Q9NNX6 404 aa16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 COL1A1P02452 1464 aaPredicted RBP16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 MYH3P11055 1940 aa16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 KLRF2D3W0D1 207 aa16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 CYTH3O43739 400 aa16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 MYBL2P10244 700 aa16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 TTC19Q6DKK2 380 aaPredicted RBP16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 TTI2Q6NXR4 508 aa16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 FAM71BQ8TC56 605 aa16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 SH3RF3Q8TEJ3 882 aaPredicted RBP16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 EHD2Q9NZN4 543 aa16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 DDX60Q8IY21 1712 aaKnown RBP16.12■□□□□ 0.17
SFSWAP-201ENST00000261674 KLRC4O43908 158 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 RBM5P52756 815 aaKnown RBP eCLIP16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 MFSD14BQ5SR56 506 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 KIAA0825Q8IV33 1275 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 AMOTL1Q8IY63 956 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 P2RX5Q93086 422 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 DUSP9Q99956 384 aaKnown RBP16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 RASSF4Q9H2L5 321 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 ARPP21Q9UBL0 812 aaPredicted RBP16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 SMCO2A6NFE2 343 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 RNASE9P60153 205 aaKnown RBP16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 LRRC41Q15345 812 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 MAP9Q49MG5 647 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 SECISBP2LQ93073 1101 aaKnown RBP16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 CDK5RAP3Q96JB5 506 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 TULP2O00295 520 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 RAD21O60216 631 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 MARCH6O60337 910 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 MOCS3O95396 460 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 ALDH1B1P30837 517 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 GGCXP38435 758 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 CACNB3P54284 484 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 ARID5AQ03989 594 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 MUM1L1Q5H9M0 696 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 SOGA3Q5TF21 947 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 CCDC181Q5TID7 509 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 FBXO33Q7Z6M2 555 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 ZNF507Q8TCN5 953 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 DNAJC7Q99615 494 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 THAP9Q9H5L6 903 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 POLD4Q9HCU8 107 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 ATP6V0A2Q9Y487 856 aa16.11■□□□□ 0.17
SFSWAP-201ENST00000261674 RAD17O75943 681 aa16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 TUBB4BP68371 445 aa16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 CCDC70Q6NSX1 233 aa16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 SND1Q7KZF4 910 aaKnown RBP eCLIP16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 RRAGAQ7L523 313 aa16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 GIMAP8Q8ND71 665 aaPredicted RBP16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 NLGN2Q8NFZ4 835 aa16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 AFAP1L1Q8TED9 768 aa16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 IFIH1Q9BYX4 1025 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 PSMD14O00487 310 aa16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 LDHBP07195 334 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 PCP11498 1178 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 EIF6P56537 245 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 TDRD12Q587J7 1177 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 HDAC7Q8WUI4 952 aa16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 TRIM9Q9C026 710 aa16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 KANSL2Q9H9L4 492 aa16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 NLRC4Q9NPP4 1024 aa16.1■□□□□ 0.17
SFSWAP-201ENST00000261674 BUB1O43683 1085 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 FECHP22830 423 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 CCNE1P24864 410 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 POLD1P28340 1107 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 SLC35G1Q2M3R5 365 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 ZNF804AQ7Z570 1209 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 CCDC155Q8N6L0 562 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 TMEM47Q9BQJ4 181 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 MAD2L2Q9UI95 211 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 NCK2O43639 380 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 RHOBTB3O94955 611 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 OR52Z1P0C646 297 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 ZBED6P86452 979 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 PICALMQ13492 652 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 COG1Q8WTW3 980 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 TMEM260Q9NX78 707 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 TBC1D7Q9P0N9 293 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 PDS5AQ29RF7 1337 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 USO1O60763 962 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 CKAP4Q07065 602 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 CACNA2D4Q7Z3S7 1137 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 EHBP1Q8NDI1 1231 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 KBTBD4Q9NVX7 518 aa16.09■□□□□ 0.17
SFSWAP-201ENST00000261674 MYH13Q9UKX3 1938 aa16.08■□□□□ 0.17
SFSWAP-201ENST00000261674 A0A1W2PQC6 194 aa16.08■□□□□ 0.17
SFSWAP-201ENST00000261674 EPHB6O15197 1021 aa16.08■□□□□ 0.17
SFSWAP-201ENST00000261674 EIF4A3P38919 411 aaKnown RBP16.08■□□□□ 0.17
SFSWAP-201ENST00000261674 NFRKBQ6P4R8 1299 aa16.08■□□□□ 0.17
SFSWAP-201ENST00000261674 SRLQ86TD4 932 aa16.08■□□□□ 0.17
SFSWAP-201ENST00000261674 TBCKQ8TEA7 893 aa16.08■□□□□ 0.17
SFSWAP-201ENST00000261674 CALML4Q96GE6 196 aa16.08■□□□□ 0.17
SFSWAP-201ENST00000261674 CRAMP1Q96RY5 1269 aa16.08■□□□□ 0.17
SFSWAP-201ENST00000261674 SELENOOQ9BVL4 669 aa16.08■□□□□ 0.17
SFSWAP-201ENST00000261674 PSD3Q9NYI0 1048 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms